RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 KIF7Q2M1P5 1343 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 CCT4P50991 539 aaKnown RBP13.3□□□□□ -0.28
PTCH1-205ENST00000418258 TMOD2Q9NZR1 351 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 USP5P45974 858 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 ZRSR2Q15696 482 aaKnown RBP13.3□□□□□ -0.28
PTCH1-205ENST00000418258 SLC26A8Q96RN1 970 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 IGHMBP2P38935 993 aaKnown RBP13.3□□□□□ -0.28
PTCH1-205ENST00000418258 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
PTCH1-205ENST00000418258 SUPT6HQ7KZ85 1726 aaKnown RBP13.29□□□□□ -0.28
PTCH1-205ENST00000418258 PIBF1Q8WXW3 757 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 RAI14Q9P0K7 980 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 KIF21BO75037 1637 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 ERLIN2O94905 339 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 PIP4K2AP48426 406 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-205ENST00000418258 RNF214Q8ND24 703 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 POGZQ7Z3K3 1410 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 ANKRD62A6NC57 917 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 STARD3NLO95772 234 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 TRIM21P19474 475 aaKnown RBP13.29□□□□□ -0.28
PTCH1-205ENST00000418258 SSBP05455 408 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCH1-205ENST00000418258 RTEL1-TNFRSF6BF6WH68 1400 aa13.29□□□□□ -0.28
PTCH1-205ENST00000418258 SEPT11Q9NVA2 429 aaKnown RBP13.29□□□□□ -0.28
PTCH1-205ENST00000418258 NEBLO76041 1014 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 ANKRD1Q15327 319 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 DESP17661 470 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 MCM2P49736 904 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 EXOSC9Q06265 439 aaKnown RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 LUC7LQ9NQ29 371 aaKnown RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 ZNF652Q9Y2D9 606 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 PRG4Q92954 1404 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 UBAC1Q9BSL1 405 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 ERCC4Q92889 916 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 CCDC85AQ96PX6 553 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 HMGB2P26583 209 aaKnown RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 TTLL12Q14166 644 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-205ENST00000418258 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 SERPINC1P01008 464 aa13.28□□□□□ -0.28
PTCH1-205ENST00000418258 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.28
PTCH1-205ENST00000418258 FIBPO43427 364 aa13.27□□□□□ -0.28
PTCH1-205ENST00000418258 AACSQ86V21 672 aa13.27□□□□□ -0.28
PTCH1-205ENST00000418258 ME1P48163 572 aa13.27□□□□□ -0.28
PTCH1-205ENST00000418258 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
PTCH1-205ENST00000418258 CAVIN1Q6NZI2 390 aaKnown RBP13.27□□□□□ -0.29
PTCH1-205ENST00000418258 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
PTCH1-205ENST00000418258 PPM1FP49593 454 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-205ENST00000418258 NOM1Q5C9Z4 860 aaKnown RBP13.26□□□□□ -0.29
PTCH1-205ENST00000418258 ABCF2Q9UG63 623 aa13.26□□□□□ -0.29
PTCH1-205ENST00000418258 NOL7Q9UMY1 257 aaKnown RBP13.26□□□□□ -0.29
PTCH1-205ENST00000418258 GRIN2BQ13224 1484 aa13.26□□□□□ -0.29
PTCH1-205ENST00000418258 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
PTCH1-205ENST00000418258 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
PTCH1-205ENST00000418258 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
PTCH1-205ENST00000418258 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
PTCH1-205ENST00000418258 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-205ENST00000418258 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
PTCH1-205ENST00000418258 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
PTCH1-205ENST00000418258 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 LRRC9Q6ZRR7 1453 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 PPFIBP1Q86W92 1011 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 ANKRD18AQ8IVF6 992 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 DACH1Q9UI36 760 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 CCP110O43303 1012 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 CEP126Q9P2H0 1117 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-205ENST00000418258 CDKL5O76039 1030 aa13.25□□□□□ -0.29
PTCH1-205ENST00000418258 FAM43AQ8N2R8 423 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 H0YHG0 523 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 IDH1O75874 414 aaKnown RBP13.24□□□□□ -0.29
PTCH1-205ENST00000418258 ADAMTS2O95450 1211 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-205ENST00000418258 SPC24Q8NBT2 197 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 CCDC181Q5TID7 509 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 GOLGA6L10A6NI86 522 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
PTCH1-205ENST00000418258 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 TSPY26PQ9H489 355 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 SRGAP3O43295 1099 aa13.24□□□□□ -0.29
PTCH1-205ENST00000418258 PRPF40AO75400 957 aaKnown RBP13.23□□□□□ -0.29
PTCH1-205ENST00000418258 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
PTCH1-205ENST00000418258 SEC63Q9UGP8 760 aaKnown RBP13.23□□□□□ -0.29
PTCH1-205ENST00000418258 TNIP1Q15025 636 aa13.23□□□□□ -0.29
PTCH1-205ENST00000418258 ZNF287Q9HBT7 754 aa13.23□□□□□ -0.29
PTCH1-205ENST00000418258 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
PTCH1-205ENST00000418258 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms