RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 GCP02774 474 aa27.42■■□□□ 1.98
CASC3-203ENST00000418132 HOXC9P31274 260 aa27.41■■□□□ 1.98
CASC3-203ENST00000418132 SOS2Q07890 1332 aaPredicted RBP27.41■■□□□ 1.98
CASC3-203ENST00000418132 MED1Q15648 1581 aaPredicted RBP27.41■■□□□ 1.98
CASC3-203ENST00000418132 NHSL1Q5SYE7 1610 aa27.4■■□□□ 1.98
CASC3-203ENST00000418132 ARHGEF10O15013 1369 aa27.39■■□□□ 1.97
CASC3-203ENST00000418132 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
CASC3-203ENST00000418132 MAPK8IP3Q9UPT6 1336 aa27.38■■□□□ 1.97
CASC3-203ENST00000418132 HMOX1P09601 288 aa27.37■■□□□ 1.97
CASC3-203ENST00000418132 PRKAR2BP31323 418 aa27.37■■□□□ 1.97
CASC3-203ENST00000418132 CDCA7LQ96GN5 454 aa27.37■■□□□ 1.97
CASC3-203ENST00000418132 CCDC27Q2M243 656 aa27.36■■□□□ 1.97
CASC3-203ENST00000418132 ARHGEF25Q86VW2 580 aa27.36■■□□□ 1.97
CASC3-203ENST00000418132 IP6K1Q92551 441 aa27.36■■□□□ 1.97
CASC3-203ENST00000418132 CRYBG1Q9Y4K1 1723 aa27.35■■□□□ 1.97
CASC3-203ENST00000418132 GOLGA2Q08379 1002 aa27.35■■□□□ 1.97
CASC3-203ENST00000418132 RRP7AQ9Y3A4 280 aaKnown RBP27.35■■□□□ 1.97
CASC3-203ENST00000418132 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
CASC3-203ENST00000418132 WWC1Q8IX03 1113 aa27.34■■□□□ 1.97
CASC3-203ENST00000418132 TMPOP42166 694 aaKnown RBP27.33■■□□□ 1.97
CASC3-203ENST00000418132 NEUROD2Q15784 382 aa27.33■■□□□ 1.97
CASC3-203ENST00000418132 SUPT16HQ9Y5B9 1047 aaKnown RBP27.32■■□□□ 1.96
CASC3-203ENST00000418132 NEFMP07197 916 aa27.31■■□□□ 1.96
CASC3-203ENST00000418132 ROBO1Q9Y6N7 1651 aa27.3■■□□□ 1.96
CASC3-203ENST00000418132 IGSF1Q8N6C5 1336 aa27.3■■□□□ 1.96
CASC3-203ENST00000418132 SULT6B1Q6IMI4 303 aa27.3■■□□□ 1.96
CASC3-203ENST00000418132 KDRP35968 1356 aa27.29■■□□□ 1.96
CASC3-203ENST00000418132 PLEKHG5O94827 1062 aa27.29■■□□□ 1.96
CASC3-203ENST00000418132 AEBP1Q8IUX7 1158 aa27.29■■□□□ 1.96
CASC3-203ENST00000418132 PHACTR3Q96KR7 559 aa27.29■■□□□ 1.96
CASC3-203ENST00000418132 EYA1Q99502 592 aa27.29■■□□□ 1.96
CASC3-203ENST00000418132 SLFN5Q08AF3 891 aa27.28■■□□□ 1.96
CASC3-203ENST00000418132 WDR63Q8IWG1 891 aa27.27■■□□□ 1.96
CASC3-203ENST00000418132 TRMT2AQ8IZ69 625 aaKnown RBP27.27■■□□□ 1.96
CASC3-203ENST00000418132 AHDC1Q5TGY3 1603 aaPredicted RBP27.26■■□□□ 1.95
CASC3-203ENST00000418132 DUSP27Q5VZP5 1158 aa27.26■■□□□ 1.95
CASC3-203ENST00000418132 CABLES1Q8TDN4 633 aa27.25■■□□□ 1.95
CASC3-203ENST00000418132 ZBTB7CA1YPR0 619 aa27.24■■□□□ 1.95
CASC3-203ENST00000418132 E9PSI1 815 aa27.24■■□□□ 1.95
CASC3-203ENST00000418132 RIPK4P57078 832 aa27.24■■□□□ 1.95
CASC3-203ENST00000418132 NFE2L2Q16236 605 aa27.24■■□□□ 1.95
CASC3-203ENST00000418132 SPINK5Q9NQ38 1064 aaPredicted RBP27.24■■□□□ 1.95
CASC3-203ENST00000418132 TRIM35Q9UPQ4 493 aa27.24■■□□□ 1.95
CASC3-203ENST00000418132 ZC3H6P61129 1189 aaKnown RBP27.24■■□□□ 1.95
CASC3-203ENST00000418132 LTV1Q96GA3 475 aaPredicted RBP27.23■■□□□ 1.95
CASC3-203ENST00000418132 ABCC6O95255 1503 aa27.22■■□□□ 1.95
CASC3-203ENST00000418132 CPDO75976 1380 aa27.22■■□□□ 1.95
CASC3-203ENST00000418132 COL18A1P39060 1754 aa27.21■■□□□ 1.95
CASC3-203ENST00000418132 ABCA3Q99758 1704 aa27.2■■□□□ 1.94
CASC3-203ENST00000418132 AXIN2Q9Y2T1 843 aa27.2■■□□□ 1.94
CASC3-203ENST00000418132 RGPD5Q99666 1765 aa27.18■■□□□ 1.94
CASC3-203ENST00000418132 DLG5Q8TDM6 1919 aa27.18■■□□□ 1.94
CASC3-203ENST00000418132 TOM1O60784 492 aa27.17■■□□□ 1.94
CASC3-203ENST00000418132 ANKRD24Q8TF21 1146 aa27.17■■□□□ 1.94
CASC3-203ENST00000418132 NCAPD2Q15021 1401 aa27.16■■□□□ 1.94
CASC3-203ENST00000418132 KIAA0232Q92628 1395 aa27.16■■□□□ 1.94
CASC3-203ENST00000418132 NBPF6Q5VWK0 638 aa27.16■■□□□ 1.94
CASC3-203ENST00000418132 LRRC59Q96AG4 307 aaKnown RBP27.16■■□□□ 1.94
CASC3-203ENST00000418132 NBPF4Q96M43 638 aa27.16■■□□□ 1.94
CASC3-203ENST00000418132 RGPD2P0DJD1 1756 aa27.16■■□□□ 1.94
CASC3-203ENST00000418132 CAMTA1Q9Y6Y1 1673 aa27.16■■□□□ 1.94
CASC3-203ENST00000418132 IL16Q14005 1332 aa27.15■■□□□ 1.94
CASC3-203ENST00000418132 RNF123Q5XPI4 1314 aa27.15■■□□□ 1.94
CASC3-203ENST00000418132 RCAN3Q9UKA8 241 aa27.15■■□□□ 1.94
CASC3-203ENST00000418132 ERBB3P21860 1342 aa27.14■■□□□ 1.94
CASC3-203ENST00000418132 LMOD3Q0VAK6 560 aa27.13■■□□□ 1.93
CASC3-203ENST00000418132 NEFLP07196 543 aa27.13■■□□□ 1.93
CASC3-203ENST00000418132 FKBP8Q14318 412 aa27.12■■□□□ 1.93
CASC3-203ENST00000418132 LMO7Q8WWI1 1683 aa27.11■■□□□ 1.93
CASC3-203ENST00000418132 USHBP1Q8N6Y0 703 aa27.11■■□□□ 1.93
CASC3-203ENST00000418132 MYH16Q9H6N6 1097 aa27.11■■□□□ 1.93
CASC3-203ENST00000418132 COL22A1Q8NFW1 1626 aaPredicted RBP27.1■■□□□ 1.93
CASC3-203ENST00000418132 CHRNA2Q15822 529 aa27.09■■□□□ 1.93
CASC3-203ENST00000418132 PHLPP1O60346 1717 aa27.09■■□□□ 1.93
CASC3-203ENST00000418132 COL16A1Q07092 1604 aaPredicted RBP27.08■■□□□ 1.93
CASC3-203ENST00000418132 HAP1P54257 671 aaPredicted RBP27.08■■□□□ 1.93
CASC3-203ENST00000418132 MTHFSDQ2M296 383 aaKnown RBP27.08■■□□□ 1.93
CASC3-203ENST00000418132 FAM208AQ9UK61 1670 aaKnown RBP27.08■■□□□ 1.93
CASC3-203ENST00000418132 CALD1Q05682 793 aaKnown RBP27.08■■□□□ 1.92
CASC3-203ENST00000418132 GAS2L2Q8NHY3 880 aa27.07■■□□□ 1.92
CASC3-203ENST00000418132 PRDM11Q9NQV5 511 aa27.07■■□□□ 1.92
CASC3-203ENST00000418132 UBAP1LF5GYI3 381 aa27.05■■□□□ 1.92
CASC3-203ENST00000418132 FAM83GA6ND36 823 aa27.04■■□□□ 1.92
CASC3-203ENST00000418132 PIP4K2BP78356 416 aa27.04■■□□□ 1.92
CASC3-203ENST00000418132 THUMPD2Q9BTF0 503 aaKnown RBP27.04■■□□□ 1.92
CASC3-203ENST00000418132 FANCIQ9NVI1 1328 aa27.04■■□□□ 1.92
CASC3-203ENST00000418132 TSR2Q969E8 191 aaKnown RBP27■■□□□ 1.91
CASC3-203ENST00000418132 HTATSF1O43719 755 aaKnown RBP27■■□□□ 1.91
CASC3-203ENST00000418132 ZNF853P0CG23 659 aa27■■□□□ 1.91
CASC3-203ENST00000418132 RRP1P56182 461 aaKnown RBP27■■□□□ 1.91
CASC3-203ENST00000418132 DCTN1Q14203 1278 aa27■■□□□ 1.91
CASC3-203ENST00000418132 CERKQ8TCT0 537 aa27■■□□□ 1.91
CASC3-203ENST00000418132 IFT57Q9NWB7 429 aa27■■□□□ 1.91
CASC3-203ENST00000418132 NLRP2Q9NX02 1062 aa26.99■■□□□ 1.91
CASC3-203ENST00000418132 CSB-PGBD3P0DP91 1061 aa26.98■■□□□ 1.91
CASC3-203ENST00000418132 GNAI1P63096 354 aa26.98■■□□□ 1.91
CASC3-203ENST00000418132 COL5A2P05997 1499 aaPredicted RBP26.98■■□□□ 1.91
CASC3-203ENST00000418132 IRX6P78412 446 aaPredicted RBP26.97■■□□□ 1.91
CASC3-203ENST00000418132 MCM10Q7L590 875 aa26.97■■□□□ 1.91
CASC3-203ENST00000418132 CFAP44Q96MT7 982 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms