RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
HDAC9-208ENST00000417496 IFT57Q9NWB7 429 aa18.17■□□□□ 0.5
HDAC9-208ENST00000417496 NUTM2FA1L443 756 aa18.17■□□□□ 0.5
HDAC9-208ENST00000417496 ZNF853P0CG23 659 aa18.17■□□□□ 0.5
HDAC9-208ENST00000417496 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
HDAC9-208ENST00000417496 BRPF1P55201 1214 aaPredicted RBP18.16■□□□□ 0.5
HDAC9-208ENST00000417496 COG3Q96JB2 828 aa18.16■□□□□ 0.5
HDAC9-208ENST00000417496 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
HDAC9-208ENST00000417496 MAP2P11137 1827 aaKnown RBP18.15■□□□□ 0.5
HDAC9-208ENST00000417496 AEBP1Q8IUX7 1158 aa18.15■□□□□ 0.5
HDAC9-208ENST00000417496 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
HDAC9-208ENST00000417496 KIF20BQ96Q89 1820 aa18.15■□□□□ 0.5
HDAC9-208ENST00000417496 CPSF1Q10570 1443 aaKnown RBP18.14■□□□□ 0.5
HDAC9-208ENST00000417496 RBM25P49756 843 aaKnown RBP18.14■□□□□ 0.49
HDAC9-208ENST00000417496 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
HDAC9-208ENST00000417496 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
HDAC9-208ENST00000417496 ATP7BP35670 1465 aa18.14■□□□□ 0.49
HDAC9-208ENST00000417496 CALD1Q05682 793 aaKnown RBP18.14■□□□□ 0.49
HDAC9-208ENST00000417496 BMP2KLQ5H9B9 411 aa18.14■□□□□ 0.49
HDAC9-208ENST00000417496 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
HDAC9-208ENST00000417496 CD2BP2O95400 341 aaKnown RBP18.13■□□□□ 0.49
HDAC9-208ENST00000417496 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
HDAC9-208ENST00000417496 CCDC61Q9Y6R9 512 aa18.13■□□□□ 0.49
HDAC9-208ENST00000417496 SOX12O15370 315 aa18.13■□□□□ 0.49
HDAC9-208ENST00000417496 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
HDAC9-208ENST00000417496 CDC42BPGQ6DT37 1551 aa18.12■□□□□ 0.49
HDAC9-208ENST00000417496 TBC1D9Q6ZT07 1266 aa18.12■□□□□ 0.49
HDAC9-208ENST00000417496 GCC1Q96CN9 775 aa18.12■□□□□ 0.49
HDAC9-208ENST00000417496 KIF2CQ99661 725 aa18.12■□□□□ 0.49
HDAC9-208ENST00000417496 EDC4Q6P2E9 1401 aaKnown RBP18.12■□□□□ 0.49
HDAC9-208ENST00000417496 ABCC4O15439 1325 aa18.12■□□□□ 0.49
HDAC9-208ENST00000417496 TRAK2O60296 914 aa18.11■□□□□ 0.49
HDAC9-208ENST00000417496 CPS1P31327 1500 aa18.11■□□□□ 0.49
HDAC9-208ENST00000417496 SULT6B1Q6IMI4 303 aa18.11■□□□□ 0.49
HDAC9-208ENST00000417496 MCM10Q7L590 875 aa18.1■□□□□ 0.49
HDAC9-208ENST00000417496 PRR36Q9H6K5 1346 aa18.1■□□□□ 0.49
HDAC9-208ENST00000417496 PTCH1Q13635 1447 aa18.1■□□□□ 0.49
HDAC9-208ENST00000417496 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
HDAC9-208ENST00000417496 XRCC6P12956 609 aaKnown RBP eCLIP18.09■□□□□ 0.49
HDAC9-208ENST00000417496 PANK2Q9BZ23 570 aa18.09■□□□□ 0.49
HDAC9-208ENST00000417496 PIK3R4Q99570 1358 aa18.09■□□□□ 0.49
HDAC9-208ENST00000417496 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.49
HDAC9-208ENST00000417496 DLC1Q96QB1 1528 aa18.08■□□□□ 0.48
HDAC9-208ENST00000417496 APBB1O00213 710 aa18.08■□□□□ 0.48
HDAC9-208ENST00000417496 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.48
HDAC9-208ENST00000417496 DDIT3P35638 169 aa18.07■□□□□ 0.48
HDAC9-208ENST00000417496 TSPOAP1O95153 1857 aa18.07■□□□□ 0.48
HDAC9-208ENST00000417496 AATKQ6ZMQ8 1374 aa18.07■□□□□ 0.48
HDAC9-208ENST00000417496 GOLGA6L3A6NEY3 463 aa18.07■□□□□ 0.48
HDAC9-208ENST00000417496 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
HDAC9-208ENST00000417496 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
HDAC9-208ENST00000417496 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
HDAC9-208ENST00000417496 CDK12Q9NYV4 1490 aaPredicted RBP18.07■□□□□ 0.48
HDAC9-208ENST00000417496 SNX21Q969T3 373 aa18.06■□□□□ 0.48
HDAC9-208ENST00000417496 API5Q9BZZ5 524 aaKnown RBP18.06■□□□□ 0.48
HDAC9-208ENST00000417496 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
HDAC9-208ENST00000417496 HSP90AB2PQ58FF8 381 aa18.06■□□□□ 0.48
HDAC9-208ENST00000417496 L1TD1Q5T7N2 865 aaKnown RBP18.06■□□□□ 0.48
HDAC9-208ENST00000417496 OTUD7AQ8TE49 926 aaPredicted RBP18.06■□□□□ 0.48
HDAC9-208ENST00000417496 TNPO1Q92973 898 aaKnown RBP18.06■□□□□ 0.48
HDAC9-208ENST00000417496 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
HDAC9-208ENST00000417496 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
HDAC9-208ENST00000417496 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
HDAC9-208ENST00000417496 HSP90AA1P07900 732 aaKnown RBP18.05■□□□□ 0.48
HDAC9-208ENST00000417496 PLEKHM2Q8IWE5 1019 aa18.05■□□□□ 0.48
HDAC9-208ENST00000417496 ESF1Q9H501 851 aaKnown RBP18.05■□□□□ 0.48
HDAC9-208ENST00000417496 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
HDAC9-208ENST00000417496 FSD2A1L4K1 749 aa18.04■□□□□ 0.48
HDAC9-208ENST00000417496 FAM43AQ8N2R8 423 aa18.03■□□□□ 0.48
HDAC9-208ENST00000417496 SETD1AO15047 1707 aaKnown RBP18.03■□□□□ 0.48
HDAC9-208ENST00000417496 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
HDAC9-208ENST00000417496 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDAC9-208ENST00000417496 NCOA3Q9Y6Q9 1424 aa18.03■□□□□ 0.48
HDAC9-208ENST00000417496 SPATA31D1Q6ZQQ2 1576 aa18.02■□□□□ 0.48
HDAC9-208ENST00000417496 RRAGDQ9NQL2 400 aaPredicted RBP18.02■□□□□ 0.48
HDAC9-208ENST00000417496 ROBO2Q9HCK4 1378 aa18.02■□□□□ 0.47
HDAC9-208ENST00000417496 ACEP12821 1306 aa18.02■□□□□ 0.47
HDAC9-208ENST00000417496 FOXO3O43524 673 aa18.02■□□□□ 0.47
HDAC9-208ENST00000417496 DCTPP1Q9H773 170 aa18.02■□□□□ 0.47
HDAC9-208ENST00000417496 NRXN3Q9Y4C0 1643 aa18.01■□□□□ 0.47
HDAC9-208ENST00000417496 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
HDAC9-208ENST00000417496 CDC45O75419 566 aa18.01■□□□□ 0.47
HDAC9-208ENST00000417496 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
HDAC9-208ENST00000417496 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
HDAC9-208ENST00000417496 CHL1O00533 1208 aa18■□□□□ 0.47
HDAC9-208ENST00000417496 MEIS3Q99687 375 aa18■□□□□ 0.47
HDAC9-208ENST00000417496 K7ELQ4 463 aaPredicted RBP18■□□□□ 0.47
HDAC9-208ENST00000417496 INTS3Q68E01 1043 aaKnown RBP18■□□□□ 0.47
HDAC9-208ENST00000417496 DDX11L8A8MPP1 907 aa17.99■□□□□ 0.47
HDAC9-208ENST00000417496 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
HDAC9-208ENST00000417496 RAB3GAP1Q15042 981 aa17.98■□□□□ 0.47
HDAC9-208ENST00000417496 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
HDAC9-208ENST00000417496 SLC26A8Q96RN1 970 aa17.98■□□□□ 0.47
HDAC9-208ENST00000417496 AGLP35573 1532 aa17.97■□□□□ 0.47
HDAC9-208ENST00000417496 F6X3S4 739 aa17.97■□□□□ 0.47
HDAC9-208ENST00000417496 TTC22Q5TAA0 569 aa17.97■□□□□ 0.47
HDAC9-208ENST00000417496 ANKRD44Q8N8A2 993 aa17.97■□□□□ 0.47
HDAC9-208ENST00000417496 KNDC1Q76NI1 1749 aa17.97■□□□□ 0.47
HDAC9-208ENST00000417496 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
HDAC9-208ENST00000417496 MSH6P52701 1360 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms