RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 CHRM1P11229 460 aaPredicted RBP10.51□□□□□ -0.73
CASP4-202ENST00000417440 PDE3BQ13370 1112 aa10.51□□□□□ -0.73
CASP4-202ENST00000417440 NBPF8Q3BBV2 869 aa10.51□□□□□ -0.73
CASP4-202ENST00000417440 STAC3Q96MF2 364 aa10.51□□□□□ -0.73
CASP4-202ENST00000417440 COL14A1Q05707 1796 aaKnown RBP10.51□□□□□ -0.73
CASP4-202ENST00000417440 SRPK2P78362 688 aaKnown RBP10.5□□□□□ -0.73
CASP4-202ENST00000417440 LARP1Q6PKG0 1096 aaKnown RBP10.5□□□□□ -0.73
CASP4-202ENST00000417440 FAM196AQ6ZSG2 479 aa10.5□□□□□ -0.73
CASP4-202ENST00000417440 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
CASP4-202ENST00000417440 NRAPQ86VF7 1730 aa10.5□□□□□ -0.73
CASP4-202ENST00000417440 NBPF1Q3BBV0 1214 aa10.49□□□□□ -0.73
CASP4-202ENST00000417440 ALS2Q96Q42 1657 aa10.49□□□□□ -0.73
CASP4-202ENST00000417440 ATP7BP35670 1465 aa10.49□□□□□ -0.73
CASP4-202ENST00000417440 CAMKK2Q96RR4 588 aa10.48□□□□□ -0.73
CASP4-202ENST00000417440 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
CASP4-202ENST00000417440 PLEKHG3A1L390 1219 aa10.47□□□□□ -0.73
CASP4-202ENST00000417440 TCP11L2Q8N4U5 519 aa10.47□□□□□ -0.73
CASP4-202ENST00000417440 GCP02774 474 aa10.46□□□□□ -0.73
CASP4-202ENST00000417440 BARGINQ6ZT62 677 aa10.46□□□□□ -0.73
CASP4-202ENST00000417440 NLRP13Q86W25 1043 aa10.46□□□□□ -0.73
CASP4-202ENST00000417440 SSH2Q76I76 1423 aa10.46□□□□□ -0.74
CASP4-202ENST00000417440 THSD7AQ9UPZ6 1657 aa10.45□□□□□ -0.74
CASP4-202ENST00000417440 LRP5O75197 1615 aa10.45□□□□□ -0.74
CASP4-202ENST00000417440 POLR3AO14802 1390 aaPredicted RBP10.45□□□□□ -0.74
CASP4-202ENST00000417440 NBPF14Q5TI25 921 aa10.45□□□□□ -0.74
CASP4-202ENST00000417440 PPIP5K1Q6PFW1 1433 aa10.44□□□□□ -0.74
CASP4-202ENST00000417440 NLRP6P59044 892 aa10.44□□□□□ -0.74
CASP4-202ENST00000417440 CABP1Q9NZU7 370 aa10.44□□□□□ -0.74
CASP4-202ENST00000417440 RGPD1P0DJD0 1748 aa10.44□□□□□ -0.74
CASP4-202ENST00000417440 CAMTA1Q9Y6Y1 1673 aa10.44□□□□□ -0.74
CASP4-202ENST00000417440 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
CASP4-202ENST00000417440 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
CASP4-202ENST00000417440 SOX12O15370 315 aa10.43□□□□□ -0.74
CASP4-202ENST00000417440 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
CASP4-202ENST00000417440 RNF25Q96BH1 459 aaPredicted RBP10.43□□□□□ -0.74
CASP4-202ENST00000417440 ARHGEF28Q8N1W1 1705 aaKnown RBP10.43□□□□□ -0.74
CASP4-202ENST00000417440 PHRF1Q9P1Y6 1649 aaKnown RBP10.43□□□□□ -0.74
CASP4-202ENST00000417440 CRYBG1Q9Y4K1 1723 aa10.42□□□□□ -0.74
CASP4-202ENST00000417440 USP19O94966 1318 aa10.42□□□□□ -0.74
CASP4-202ENST00000417440 TOM1L2Q6ZVM7 507 aa10.42□□□□□ -0.74
CASP4-202ENST00000417440 TSPYL2Q9H2G4 693 aaPredicted RBP10.42□□□□□ -0.74
CASP4-202ENST00000417440 PPP1R1BQ9UD71 204 aaPredicted RBP10.42□□□□□ -0.74
CASP4-202ENST00000417440 THRAP3Q9Y2W1 955 aaKnown RBP10.42□□□□□ -0.74
CASP4-202ENST00000417440 CPDO75976 1380 aa10.41□□□□□ -0.74
CASP4-202ENST00000417440 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
CASP4-202ENST00000417440 ITSN1Q15811 1721 aa10.41□□□□□ -0.74
CASP4-202ENST00000417440 TNS1Q9HBL0 1735 aaKnown RBP10.41□□□□□ -0.74
CASP4-202ENST00000417440 PARD3Q8TEW0 1356 aa10.4□□□□□ -0.74
CASP4-202ENST00000417440 NRKQ7Z2Y5 1582 aa10.4□□□□□ -0.74
CASP4-202ENST00000417440 DDB1Q16531 1140 aa10.4□□□□□ -0.74
CASP4-202ENST00000417440 COL5A2P05997 1499 aaPredicted RBP10.39□□□□□ -0.75
CASP4-202ENST00000417440 CSB-PGBD3P0DP91 1061 aa10.39□□□□□ -0.75
CASP4-202ENST00000417440 NEUROD1Q13562 356 aa10.39□□□□□ -0.75
CASP4-202ENST00000417440 PTF1AQ7RTS3 328 aa10.39□□□□□ -0.75
CASP4-202ENST00000417440 SPON1Q9HCB6 807 aa10.39□□□□□ -0.75
CASP4-202ENST00000417440 TAOK2Q9UL54 1235 aa10.39□□□□□ -0.75
CASP4-202ENST00000417440 PYGBP11216 843 aa10.38□□□□□ -0.75
CASP4-202ENST00000417440 YY1P25490 414 aa10.38□□□□□ -0.75
CASP4-202ENST00000417440 BBXQ8WY36 941 aaPredicted RBP10.38□□□□□ -0.75
CASP4-202ENST00000417440 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
CASP4-202ENST00000417440 BCL11BQ9C0K0 894 aaPredicted RBP10.38□□□□□ -0.75
CASP4-202ENST00000417440 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
CASP4-202ENST00000417440 CRB1P82279 1406 aa10.38□□□□□ -0.75
CASP4-202ENST00000417440 TOPAZ1Q8N9V7 1692 aa10.38□□□□□ -0.75
CASP4-202ENST00000417440 EVC2Q86UK5 1308 aa10.37□□□□□ -0.75
CASP4-202ENST00000417440 KCNQ2O43526 872 aa10.37□□□□□ -0.75
CASP4-202ENST00000417440 USP6P35125 1406 aa10.37□□□□□ -0.75
CASP4-202ENST00000417440 SIN3AQ96ST3 1273 aa10.37□□□□□ -0.75
CASP4-202ENST00000417440 AATKQ6ZMQ8 1374 aa10.37□□□□□ -0.75
CASP4-202ENST00000417440 OVOS2A0A0G2JMS6 1433 aa10.36□□□□□ -0.75
CASP4-202ENST00000417440 OVOS2A0A0J9YW53 1432 aa10.36□□□□□ -0.75
CASP4-202ENST00000417440 OVOS2Q6IE36 1432 aa10.36□□□□□ -0.75
CASP4-202ENST00000417440 C11orf95C9JLR9 678 aaPredicted RBP10.36□□□□□ -0.75
CASP4-202ENST00000417440 MARCH10Q8NA82 808 aaPredicted RBP10.36□□□□□ -0.75
CASP4-202ENST00000417440 LMO7Q8WWI1 1683 aa10.36□□□□□ -0.75
CASP4-202ENST00000417440 ZBTB7AO95365 584 aa10.35□□□□□ -0.75
CASP4-202ENST00000417440 PLCB2Q00722 1185 aa10.35□□□□□ -0.75
CASP4-202ENST00000417440 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
CASP4-202ENST00000417440 SGIP1Q9BQI5 828 aa10.35□□□□□ -0.75
CASP4-202ENST00000417440 PDGFDQ9GZP0 370 aaPredicted RBP10.35□□□□□ -0.75
CASP4-202ENST00000417440 ANO8Q9HCE9 1232 aaPredicted RBP10.35□□□□□ -0.75
CASP4-202ENST00000417440 BRD4O60885 1362 aaPredicted RBP10.35□□□□□ -0.75
CASP4-202ENST00000417440 TTC21BQ7Z4L5 1316 aa10.34□□□□□ -0.75
CASP4-202ENST00000417440 WDR17Q8IZU2 1322 aa10.34□□□□□ -0.75
CASP4-202ENST00000417440 EXOC5O00471 708 aa10.34□□□□□ -0.75
CASP4-202ENST00000417440 PLSCR1O15162 318 aa10.34□□□□□ -0.75
CASP4-202ENST00000417440 ARHGEF25Q86VW2 580 aa10.34□□□□□ -0.75
CASP4-202ENST00000417440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.34□□□□□ -0.75
CASP4-202ENST00000417440 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
CASP4-202ENST00000417440 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
CASP4-202ENST00000417440 ROCK2O75116 1388 aaKnown RBP10.33□□□□□ -0.76
CASP4-202ENST00000417440 NUP188Q5SRE5 1749 aa10.33□□□□□ -0.76
CASP4-202ENST00000417440 CPSF1Q10570 1443 aaKnown RBP10.33□□□□□ -0.76
CASP4-202ENST00000417440 QRICH2Q9H0J4 1663 aa10.32□□□□□ -0.76
CASP4-202ENST00000417440 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
CASP4-202ENST00000417440 ACSBG1Q96GR2 724 aa10.32□□□□□ -0.76
CASP4-202ENST00000417440 CDCA7Q9BWT1 371 aaPredicted RBP10.32□□□□□ -0.76
CASP4-202ENST00000417440 CARD10Q9BWT7 1032 aa10.32□□□□□ -0.76
CASP4-202ENST00000417440 STK32BQ9NY57 414 aa10.32□□□□□ -0.76
CASP4-202ENST00000417440 SLIT3O75094 1523 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms