RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 ARID5BQ14865 1188 aa11.52□□□□□ -0.57
GTF3AP1-201ENST00000416942 SLC10A4Q96EP9 437 aa11.52□□□□□ -0.57
GTF3AP1-201ENST00000416942 CDK15Q96Q40 435 aa11.52□□□□□ -0.57
GTF3AP1-201ENST00000416942 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
GTF3AP1-201ENST00000416942 SMPD1P17405 629 aa11.51□□□□□ -0.57
GTF3AP1-201ENST00000416942 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
GTF3AP1-201ENST00000416942 FAM187AA6NFU0 413 aa11.5□□□□□ -0.57
GTF3AP1-201ENST00000416942 CLUAP1Q96AJ1 413 aa11.5□□□□□ -0.57
GTF3AP1-201ENST00000416942 MAP4K5Q9Y4K4 846 aa11.5□□□□□ -0.57
GTF3AP1-201ENST00000416942 WASF2Q9Y6W5 498 aa11.49□□□□□ -0.57
GTF3AP1-201ENST00000416942 ADH1CP00326 375 aa11.48□□□□□ -0.57
GTF3AP1-201ENST00000416942 VASH1Q7L8A9 365 aaPredicted RBP11.48□□□□□ -0.57
GTF3AP1-201ENST00000416942 DZIP3Q86Y13 1208 aaKnown RBP11.48□□□□□ -0.57
GTF3AP1-201ENST00000416942 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
GTF3AP1-201ENST00000416942 ZNF330Q9Y3S2 320 aaPredicted RBP11.48□□□□□ -0.57
GTF3AP1-201ENST00000416942 RIMBP3CA6NJZ7 1639 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 RIMBP3BA6NNM3 1639 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 RIMBP3Q9UFD9 1639 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 MRC2Q9UBG0 1479 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 DGAT1O75907 488 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 VAC14Q08AM6 782 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 WASHC4Q2M389 1173 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 PKDCCQ504Y2 493 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 CYB5RLQ6IPT4 315 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 PCDHB9Q9Y5E1 797 aa11.47□□□□□ -0.57
GTF3AP1-201ENST00000416942 GRM5P41594 1212 aa11.46□□□□□ -0.57
GTF3AP1-201ENST00000416942 WWC1Q8IX03 1113 aa11.46□□□□□ -0.57
GTF3AP1-201ENST00000416942 FSHRP23945 695 aa11.44□□□□□ -0.58
GTF3AP1-201ENST00000416942 NR5A1Q13285 461 aa11.44□□□□□ -0.58
GTF3AP1-201ENST00000416942 HPS1Q92902 700 aa11.44□□□□□ -0.58
GTF3AP1-201ENST00000416942 KCTD15Q96SI1 283 aaPredicted RBP11.44□□□□□ -0.58
GTF3AP1-201ENST00000416942 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
GTF3AP1-201ENST00000416942 A6NJR5 290 aa11.43□□□□□ -0.58
GTF3AP1-201ENST00000416942 NNTQ13423 1086 aa11.43□□□□□ -0.58
GTF3AP1-201ENST00000416942 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
GTF3AP1-201ENST00000416942 Q6ZNB5 142 aa11.43□□□□□ -0.58
GTF3AP1-201ENST00000416942 ZNF592Q92610 1267 aa11.43□□□□□ -0.58
GTF3AP1-201ENST00000416942 WDR62O43379 1518 aa11.42□□□□□ -0.58
GTF3AP1-201ENST00000416942 AVPP01185 164 aa11.42□□□□□ -0.58
GTF3AP1-201ENST00000416942 MCCD1P59942 119 aaPredicted RBP11.42□□□□□ -0.58
GTF3AP1-201ENST00000416942 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.58
GTF3AP1-201ENST00000416942 PROSER2Q86WR7 435 aaPredicted RBP11.42□□□□□ -0.58
GTF3AP1-201ENST00000416942 NR3C2P08235 984 aa11.41□□□□□ -0.58
GTF3AP1-201ENST00000416942 FNBP4Q8N3X1 1017 aaPredicted RBP11.4□□□□□ -0.58
GTF3AP1-201ENST00000416942 CADPSQ9ULU8 1353 aa11.4□□□□□ -0.59
GTF3AP1-201ENST00000416942 ESPNB1AK53 854 aa11.39□□□□□ -0.59
GTF3AP1-201ENST00000416942 INTS6LQ5JSJ4 861 aaKnown RBP11.39□□□□□ -0.59
GTF3AP1-201ENST00000416942 ARHGEF11O15085 1522 aa11.39□□□□□ -0.59
GTF3AP1-201ENST00000416942 GIGYF1O75420 1035 aaPredicted RBP11.38□□□□□ -0.59
GTF3AP1-201ENST00000416942 MYT1Q01538 1121 aa11.38□□□□□ -0.59
GTF3AP1-201ENST00000416942 CCDC116Q8IYX3 515 aa11.38□□□□□ -0.59
GTF3AP1-201ENST00000416942 SOX11P35716 441 aa11.37□□□□□ -0.59
GTF3AP1-201ENST00000416942 POM121CA8CG34 1229 aa11.36□□□□□ -0.59
GTF3AP1-201ENST00000416942 RAB15P59190 212 aa11.36□□□□□ -0.59
GTF3AP1-201ENST00000416942 SEMA3FQ13275 785 aa11.36□□□□□ -0.59
GTF3AP1-201ENST00000416942 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
GTF3AP1-201ENST00000416942 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
GTF3AP1-201ENST00000416942 WDR4P57081 412 aaKnown RBP11.35□□□□□ -0.59
GTF3AP1-201ENST00000416942 SEPT12Q8IYM1 358 aa11.35□□□□□ -0.59
GTF3AP1-201ENST00000416942 CRIPAKQ8N1N5 446 aa11.35□□□□□ -0.59
GTF3AP1-201ENST00000416942 KLF16Q9BXK1 252 aaPredicted RBP11.35□□□□□ -0.59
GTF3AP1-201ENST00000416942 LCE2BO14633 110 aa11.34□□□□□ -0.59
GTF3AP1-201ENST00000416942 TIMP2P16035 220 aa11.34□□□□□ -0.59
GTF3AP1-201ENST00000416942 SMCPP49901 116 aaPredicted RBP11.34□□□□□ -0.59
GTF3AP1-201ENST00000416942 DHX9Q08211 1270 aaKnown RBP11.34□□□□□ -0.59
GTF3AP1-201ENST00000416942 PPP1R26Q5T8A7 1209 aaPredicted RBP11.34□□□□□ -0.59
GTF3AP1-201ENST00000416942 TRAF7Q6Q0C0 670 aa11.34□□□□□ -0.59
GTF3AP1-201ENST00000416942 ZMYND15Q9H091 742 aa11.34□□□□□ -0.59
GTF3AP1-201ENST00000416942 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
GTF3AP1-201ENST00000416942 AXIN1O15169 862 aa11.33□□□□□ -0.6
GTF3AP1-201ENST00000416942 ST8SIA5O15466 376 aa11.33□□□□□ -0.6
GTF3AP1-201ENST00000416942 ZIC2O95409 532 aaPredicted RBP11.33□□□□□ -0.6
GTF3AP1-201ENST00000416942 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
GTF3AP1-201ENST00000416942 AAASQ9NRG9 546 aa11.33□□□□□ -0.6
GTF3AP1-201ENST00000416942 ERVH48-1M5A8F1 160 aa11.32□□□□□ -0.6
GTF3AP1-201ENST00000416942 CAPN5O15484 640 aaPredicted RBP11.32□□□□□ -0.6
GTF3AP1-201ENST00000416942 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
GTF3AP1-201ENST00000416942 ALG2Q9H553 416 aa11.32□□□□□ -0.6
GTF3AP1-201ENST00000416942 TRAK2O60296 914 aa11.31□□□□□ -0.6
GTF3AP1-201ENST00000416942 C14orf37Q86TY3 774 aa11.31□□□□□ -0.6
GTF3AP1-201ENST00000416942 ADAMTS19Q8TE59 1207 aa11.31□□□□□ -0.6
GTF3AP1-201ENST00000416942 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
GTF3AP1-201ENST00000416942 CEP164Q9UPV0 1460 aa11.31□□□□□ -0.6
GTF3AP1-201ENST00000416942 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
GTF3AP1-201ENST00000416942 TMPRSS4Q9NRS4 437 aa11.3□□□□□ -0.6
GTF3AP1-201ENST00000416942 PGPEP1Q9NXJ5 209 aa11.3□□□□□ -0.6
GTF3AP1-201ENST00000416942 SLFNL1Q499Z3 407 aa11.29□□□□□ -0.6
GTF3AP1-201ENST00000416942 HDGFL1Q5TGJ6 251 aa11.28□□□□□ -0.6
GTF3AP1-201ENST00000416942 PHTF2Q8N3S3 785 aa11.28□□□□□ -0.6
GTF3AP1-201ENST00000416942 RNF135Q8IUD6 432 aa11.27□□□□□ -0.61
GTF3AP1-201ENST00000416942 ZNF784Q8NCA9 323 aaPredicted RBP11.27□□□□□ -0.61
GTF3AP1-201ENST00000416942 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.61
GTF3AP1-201ENST00000416942 FANCD2Q9BXW9 1451 aa11.26□□□□□ -0.61
GTF3AP1-201ENST00000416942 GLMNQ92990 594 aa11.26□□□□□ -0.61
GTF3AP1-201ENST00000416942 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
GTF3AP1-201ENST00000416942 DACH1Q9UI36 760 aa11.26□□□□□ -0.61
GTF3AP1-201ENST00000416942 PCDHB11Q9Y5F2 797 aa11.26□□□□□ -0.61
GTF3AP1-201ENST00000416942 ARAP1Q96P48 1450 aa11.25□□□□□ -0.61
GTF3AP1-201ENST00000416942 PIK3CDO00329 1044 aa11.24□□□□□ -0.61
GTF3AP1-201ENST00000416942 LILRA1O75019 489 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms