RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 LOC105371045A0A1W2PR82 267 aa8.39□□□□□ -1.07
TTC39DP-201ENST00000416781 WNT7AO00755 349 aa8.39□□□□□ -1.07
TTC39DP-201ENST00000416781 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
TTC39DP-201ENST00000416781 PIK3CDO00329 1044 aa8.38□□□□□ -1.07
TTC39DP-201ENST00000416781 ZNF598Q86UK7 904 aaKnown RBP8.38□□□□□ -1.07
TTC39DP-201ENST00000416781 RNF135Q8IUD6 432 aa8.38□□□□□ -1.07
TTC39DP-201ENST00000416781 PALM3A6NDB9 673 aaPredicted RBP8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 VASH1Q7L8A9 365 aaPredicted RBP8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 MAP4K5Q9Y4K4 846 aa8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 GFRA3O60609 400 aa8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 FOXC1Q12948 553 aa8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 ZNF787Q6DD87 383 aa8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 TBC1D9Q6ZT07 1266 aa8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 MRGPRX2Q96LB1 330 aa8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
TTC39DP-201ENST00000416781 GIGYF1O75420 1035 aaPredicted RBP8.36□□□□□ -1.07
TTC39DP-201ENST00000416781 SKIP12755 728 aa8.36□□□□□ -1.07
TTC39DP-201ENST00000416781 NFATC2IPQ8NCF5 419 aa8.36□□□□□ -1.07
TTC39DP-201ENST00000416781 KCTD15Q96SI1 283 aaPredicted RBP8.36□□□□□ -1.07
TTC39DP-201ENST00000416781 LCE2BO14633 110 aa8.35□□□□□ -1.07
TTC39DP-201ENST00000416781 ATP9BO43861 1147 aa8.35□□□□□ -1.07
TTC39DP-201ENST00000416781 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
TTC39DP-201ENST00000416781 SIAH2O43255 324 aa8.34□□□□□ -1.07
TTC39DP-201ENST00000416781 RFX1P22670 979 aa8.34□□□□□ -1.07
TTC39DP-201ENST00000416781 LMOD1P29536 600 aaPredicted RBP8.34□□□□□ -1.07
TTC39DP-201ENST00000416781 RAB15P59190 212 aa8.34□□□□□ -1.07
TTC39DP-201ENST00000416781 CFAP70Q5T0N1 1121 aa8.34□□□□□ -1.07
TTC39DP-201ENST00000416781 RNF20Q5VTR2 975 aa8.34□□□□□ -1.07
TTC39DP-201ENST00000416781 MAFBQ9Y5Q3 323 aaPredicted RBP8.34□□□□□ -1.07
TTC39DP-201ENST00000416781 ESPNB1AK53 854 aa8.34□□□□□ -1.08
TTC39DP-201ENST00000416781 FSHRP23945 695 aa8.34□□□□□ -1.08
TTC39DP-201ENST00000416781 SEPT12Q8IYM1 358 aa8.34□□□□□ -1.08
TTC39DP-201ENST00000416781 PHTF2Q8N3S3 785 aa8.34□□□□□ -1.08
TTC39DP-201ENST00000416781 PLPP7Q8NBV4 271 aa8.34□□□□□ -1.08
TTC39DP-201ENST00000416781 CDK15Q96Q40 435 aa8.34□□□□□ -1.08
TTC39DP-201ENST00000416781 PKD2L1Q9P0L9 805 aa8.34□□□□□ -1.08
TTC39DP-201ENST00000416781 USP17L5A8MUK1 530 aa8.33□□□□□ -1.08
TTC39DP-201ENST00000416781 INTS6LQ5JSJ4 861 aaKnown RBP8.33□□□□□ -1.08
TTC39DP-201ENST00000416781 MPNDQ8N594 471 aa8.33□□□□□ -1.08
TTC39DP-201ENST00000416781 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
TTC39DP-201ENST00000416781 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
TTC39DP-201ENST00000416781 USP17L2Q6R6M4 530 aa8.32□□□□□ -1.08
TTC39DP-201ENST00000416781 USP17L1Q7RTZ2 530 aa8.32□□□□□ -1.08
TTC39DP-201ENST00000416781 ZNF775Q96BV0 537 aaPredicted RBP8.32□□□□□ -1.08
TTC39DP-201ENST00000416781 DOLKQ9UPQ8 538 aa8.32□□□□□ -1.08
TTC39DP-201ENST00000416781 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
TTC39DP-201ENST00000416781 ADH1CP00326 375 aa8.31□□□□□ -1.08
TTC39DP-201ENST00000416781 ALDH1A1P00352 501 aa8.31□□□□□ -1.08
TTC39DP-201ENST00000416781 CCDC85AQ96PX6 553 aaPredicted RBP8.31□□□□□ -1.08
TTC39DP-201ENST00000416781 PCDHB11Q9Y5F2 797 aa8.31□□□□□ -1.08
TTC39DP-201ENST00000416781 MAP7D1Q3KQU3 841 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 DEPDC4Q8N2C3 294 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 GDF9O60383 454 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 GRM5P41594 1212 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 NCOA4Q13772 614 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 OXLD1Q5BKU9 147 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 CCDC125Q86Z20 511 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 PLEKHM2Q8IWE5 1019 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 PBXIP1Q96AQ6 731 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 CHIC2Q9UKJ5 165 aa8.3□□□□□ -1.08
TTC39DP-201ENST00000416781 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
TTC39DP-201ENST00000416781 NRG2O14511 850 aaPredicted RBP8.29□□□□□ -1.08
TTC39DP-201ENST00000416781 NR5A1Q13285 461 aa8.29□□□□□ -1.08
TTC39DP-201ENST00000416781 EML3Q32P44 896 aa8.29□□□□□ -1.08
TTC39DP-201ENST00000416781 CYP4X1Q8N118 509 aa8.29□□□□□ -1.08
TTC39DP-201ENST00000416781 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
TTC39DP-201ENST00000416781 WASF2Q9Y6W5 498 aa8.29□□□□□ -1.08
TTC39DP-201ENST00000416781 DHX9Q08211 1270 aaKnown RBP8.28□□□□□ -1.08
TTC39DP-201ENST00000416781 TSGA10IPQ3SY00 556 aa8.28□□□□□ -1.08
TTC39DP-201ENST00000416781 ERVH48-1M5A8F1 160 aa8.27□□□□□ -1.08
TTC39DP-201ENST00000416781 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.08
TTC39DP-201ENST00000416781 PPP1R15AO75807 674 aaPredicted RBP8.27□□□□□ -1.08
TTC39DP-201ENST00000416781 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.08
TTC39DP-201ENST00000416781 CCDC116Q8IYX3 515 aa8.27□□□□□ -1.08
TTC39DP-201ENST00000416781 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
TTC39DP-201ENST00000416781 NR3C2P08235 984 aa8.26□□□□□ -1.09
TTC39DP-201ENST00000416781 PRR20EP86478 221 aa8.26□□□□□ -1.09
TTC39DP-201ENST00000416781 PRR20CP86479 221 aa8.26□□□□□ -1.09
TTC39DP-201ENST00000416781 PRR20DP86480 221 aa8.26□□□□□ -1.09
TTC39DP-201ENST00000416781 PRR20BP86481 221 aa8.26□□□□□ -1.09
TTC39DP-201ENST00000416781 PRR20AP86496 221 aa8.26□□□□□ -1.09
TTC39DP-201ENST00000416781 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
TTC39DP-201ENST00000416781 VRTNQ9H8Y1 702 aa8.26□□□□□ -1.09
TTC39DP-201ENST00000416781 J3QL48 77 aa8.25□□□□□ -1.09
TTC39DP-201ENST00000416781 NNTQ13423 1086 aa8.25□□□□□ -1.09
TTC39DP-201ENST00000416781 CDCA8Q53HL2 280 aa8.25□□□□□ -1.09
TTC39DP-201ENST00000416781 PPP1R26Q5T8A7 1209 aaPredicted RBP8.25□□□□□ -1.09
TTC39DP-201ENST00000416781 SIRT1Q96EB6 747 aa8.25□□□□□ -1.09
TTC39DP-201ENST00000416781 MKRN1Q9UHC7 482 aaKnown RBP8.25□□□□□ -1.09
TTC39DP-201ENST00000416781 KANK4Q5T7N3 995 aaPredicted RBP8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 TMPRSS4Q9NRS4 437 aa8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 TOR4AQ9NXH8 423 aa8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 NOD1Q9Y239 953 aa8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 MYCP01106 439 aaPredicted RBP8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 SRPK2P78362 688 aaKnown RBP8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 USP4Q13107 963 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms