RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 EN1Q05925 392 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-210ENST00000416778 TRIM37O94972 964 aa25.15■■□□□ 1.62
CPNE1-210ENST00000416778 WDR17Q8IZU2 1322 aa25.14■■□□□ 1.62
CPNE1-210ENST00000416778 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.62
CPNE1-210ENST00000416778 COL18A1P39060 1754 aa25.14■■□□□ 1.62
CPNE1-210ENST00000416778 A0A1W2PP64 1363 aa25.12■■□□□ 1.61
CPNE1-210ENST00000416778 CARD10Q9BWT7 1032 aa25.11■■□□□ 1.61
CPNE1-210ENST00000416778 EDC4Q6P2E9 1401 aaKnown RBP25.11■■□□□ 1.61
CPNE1-210ENST00000416778 CAMKK2Q96RR4 588 aa25.1■■□□□ 1.61
CPNE1-210ENST00000416778 NFAT5O94916 1531 aa25.09■■□□□ 1.61
CPNE1-210ENST00000416778 TMF1P82094 1093 aa25.09■■□□□ 1.61
CPNE1-210ENST00000416778 MON2Q7Z3U7 1717 aa25.09■■□□□ 1.61
CPNE1-210ENST00000416778 USP47Q96K76 1375 aa25.08■■□□□ 1.61
CPNE1-210ENST00000416778 NINLQ9Y2I6 1382 aa25.08■■□□□ 1.61
CPNE1-210ENST00000416778 APBA3O96018 575 aa25.08■■□□□ 1.61
CPNE1-210ENST00000416778 CSB-PGBD3P0DP91 1061 aa25.08■■□□□ 1.61
CPNE1-210ENST00000416778 EZH2Q15910 746 aaKnown RBP25.08■■□□□ 1.61
CPNE1-210ENST00000416778 DDB1Q16531 1140 aa25.07■■□□□ 1.6
CPNE1-210ENST00000416778 CDCA7Q9BWT1 371 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-210ENST00000416778 DISP2A7MBM2 1401 aa25.06■■□□□ 1.6
CPNE1-210ENST00000416778 C11orf95C9JLR9 678 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-210ENST00000416778 MARCH10Q8NA82 808 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-210ENST00000416778 EXOC5O00471 708 aa25.01■■□□□ 1.59
CPNE1-210ENST00000416778 CDCA8Q53HL2 280 aa25.01■■□□□ 1.59
CPNE1-210ENST00000416778 RGPD1P0DJD0 1748 aa25■■□□□ 1.59
CPNE1-210ENST00000416778 PSDA5PKW4 1024 aaPredicted RBP25■■□□□ 1.59
CPNE1-210ENST00000416778 FBLN1P23142 703 aa25■■□□□ 1.59
CPNE1-210ENST00000416778 IP6K1Q92551 441 aa25■■□□□ 1.59
CPNE1-210ENST00000416778 COG3Q96JB2 828 aa25■■□□□ 1.59
CPNE1-210ENST00000416778 ANKRD36BQ8N2N9 1353 aa25■■□□□ 1.59
CPNE1-210ENST00000416778 OVOS2A0A0J9YW53 1432 aa25■■□□□ 1.59
CPNE1-210ENST00000416778 OVOS2Q6IE36 1432 aa25■■□□□ 1.59
CPNE1-210ENST00000416778 FYB1O15117 783 aa24.99■■□□□ 1.59
CPNE1-210ENST00000416778 ERBB3P21860 1342 aa24.99■■□□□ 1.59
CPNE1-210ENST00000416778 ANKRD24Q8TF21 1146 aa24.99■■□□□ 1.59
CPNE1-210ENST00000416778 NLRP2Q9NX02 1062 aa24.99■■□□□ 1.59
CPNE1-210ENST00000416778 RGPD5Q99666 1765 aa24.98■■□□□ 1.59
CPNE1-210ENST00000416778 PARP4Q9UKK3 1724 aaKnown RBP24.98■■□□□ 1.59
CPNE1-210ENST00000416778 USP54Q70EL1 1684 aa24.98■■□□□ 1.59
CPNE1-210ENST00000416778 CCDC7Q96M83 1385 aa24.98■■□□□ 1.59
CPNE1-210ENST00000416778 ABCC6O95255 1503 aa24.96■■□□□ 1.59
CPNE1-210ENST00000416778 PTF1AQ7RTS3 328 aa24.96■■□□□ 1.59
CPNE1-210ENST00000416778 CCER1Q8TC90 406 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-210ENST00000416778 PARD3Q8TEW0 1356 aa24.95■■□□□ 1.59
CPNE1-210ENST00000416778 R3HDM1Q15032 1099 aaKnown RBP24.95■■□□□ 1.58
CPNE1-210ENST00000416778 BCL11BQ9C0K0 894 aaPredicted RBP24.95■■□□□ 1.58
CPNE1-210ENST00000416778 TNS1Q9HBL0 1735 aaKnown RBP24.95■■□□□ 1.58
CPNE1-210ENST00000416778 OVOS2A0A0G2JMS6 1433 aa24.95■■□□□ 1.58
CPNE1-210ENST00000416778 CARD14Q9BXL6 1004 aa24.94■■□□□ 1.58
CPNE1-210ENST00000416778 MAP3K19Q56UN5 1328 aa24.93■■□□□ 1.58
CPNE1-210ENST00000416778 PLSCR1O15162 318 aa24.93■■□□□ 1.58
CPNE1-210ENST00000416778 GGNBP2Q9H3C7 697 aa24.93■■□□□ 1.58
CPNE1-210ENST00000416778 BCL9O00512 1426 aa24.92■■□□□ 1.58
CPNE1-210ENST00000416778 IL2RBP14784 551 aa24.91■■□□□ 1.58
CPNE1-210ENST00000416778 PEAK1Q9H792 1746 aa24.9■■□□□ 1.58
CPNE1-210ENST00000416778 HOXC9P31274 260 aa24.9■■□□□ 1.58
CPNE1-210ENST00000416778 LTV1Q96GA3 475 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-210ENST00000416778 AMPHP49418 695 aa24.89■■□□□ 1.58
CPNE1-210ENST00000416778 LRRC37A3O60309 1634 aa24.89■■□□□ 1.57
CPNE1-210ENST00000416778 NBPF14Q5TI25 921 aa24.87■■□□□ 1.57
CPNE1-210ENST00000416778 PROM2Q8N271 834 aa24.87■■□□□ 1.57
CPNE1-210ENST00000416778 RRS1Q15050 365 aaKnown RBP24.86■■□□□ 1.57
CPNE1-210ENST00000416778 KCNQ2O43526 872 aa24.85■■□□□ 1.57
CPNE1-210ENST00000416778 LTN1O94822 1766 aa24.85■■□□□ 1.57
CPNE1-210ENST00000416778 EIF4G2P78344 907 aaKnown RBP eCLIP24.83■■□□□ 1.57
CPNE1-210ENST00000416778 HSPA5P11021 654 aaKnown RBP24.82■■□□□ 1.56
CPNE1-210ENST00000416778 TNS2Q63HR2 1409 aa24.8■■□□□ 1.56
CPNE1-210ENST00000416778 WNK3Q9BYP7 1800 aa24.8■■□□□ 1.56
CPNE1-210ENST00000416778 NBPF6Q5VWK0 638 aa24.8■■□□□ 1.56
CPNE1-210ENST00000416778 NBPF4Q96M43 638 aa24.8■■□□□ 1.56
CPNE1-210ENST00000416778 SBF2Q86WG5 1849 aa24.79■■□□□ 1.56
CPNE1-210ENST00000416778 HSP90AB2PQ58FF8 381 aa24.79■■□□□ 1.56
CPNE1-210ENST00000416778 ACSBG1Q96GR2 724 aa24.79■■□□□ 1.56
CPNE1-210ENST00000416778 DDX54Q8TDD1 881 aaKnown RBP24.78■■□□□ 1.56
CPNE1-210ENST00000416778 NSD3Q9BZ95 1437 aa24.77■■□□□ 1.56
CPNE1-210ENST00000416778 TXNRD1Q16881 649 aa24.76■■□□□ 1.55
CPNE1-210ENST00000416778 POLR3GLQ9BT43 218 aa24.76■■□□□ 1.55
CPNE1-210ENST00000416778 RTL1A6NKG5 1358 aa24.76■■□□□ 1.55
CPNE1-210ENST00000416778 RREB1Q92766 1687 aa24.75■■□□□ 1.55
CPNE1-210ENST00000416778 ZCRB1Q8TBF4 217 aaKnown RBP24.74■■□□□ 1.55
CPNE1-210ENST00000416778 INSRP06213 1382 aa24.73■■□□□ 1.55
CPNE1-210ENST00000416778 KIF24Q5T7B8 1368 aa24.72■■□□□ 1.55
CPNE1-210ENST00000416778 ANO8Q9HCE9 1232 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-210ENST00000416778 EMILIN1Q9Y6C2 1016 aa24.72■■□□□ 1.55
CPNE1-210ENST00000416778 NUP188Q5SRE5 1749 aa24.72■■□□□ 1.55
CPNE1-210ENST00000416778 CGNL1Q0VF96 1302 aa24.71■■□□□ 1.55
CPNE1-210ENST00000416778 USHBP1Q8N6Y0 703 aa24.71■■□□□ 1.55
CPNE1-210ENST00000416778 LRP5O75197 1615 aa24.71■■□□□ 1.55
CPNE1-210ENST00000416778 PANK3Q9H999 370 aa24.7■■□□□ 1.54
CPNE1-210ENST00000416778 MYOM1P52179 1685 aa24.69■■□□□ 1.54
CPNE1-210ENST00000416778 FLT4P35916 1363 aa24.68■■□□□ 1.54
CPNE1-210ENST00000416778 PRIM1P49642 420 aaKnown RBP24.67■■□□□ 1.54
CPNE1-210ENST00000416778 POLKQ9UBT6 870 aa24.67■■□□□ 1.54
CPNE1-210ENST00000416778 WASHC2AQ641Q2 1341 aa24.66■■□□□ 1.54
CPNE1-210ENST00000416778 PPM1GO15355 546 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-210ENST00000416778 RAPGEF4Q8WZA2 1011 aa24.66■■□□□ 1.54
CPNE1-210ENST00000416778 PDGFDQ9GZP0 370 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-210ENST00000416778 RGPD3A6NKT7 1758 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-210ENST00000416778 RGPD4Q7Z3J3 1758 aa24.65■■□□□ 1.54
CPNE1-210ENST00000416778 SLC15A2Q16348 729 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms