RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 FCHSD2O94868 740 aa18.91■□□□□ 0.62
PHRF1-203ENST00000416188 TPD52L1Q16890 204 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-203ENST00000416188 TCEAL9Q9UHQ7 104 aa18.9■□□□□ 0.62
PHRF1-203ENST00000416188 MPHOSPH8Q99549 860 aa18.9■□□□□ 0.62
PHRF1-203ENST00000416188 ZNF652Q9Y2D9 606 aa18.9■□□□□ 0.62
PHRF1-203ENST00000416188 ERC2O15083 957 aa18.9■□□□□ 0.62
PHRF1-203ENST00000416188 LRRC59Q96AG4 307 aaKnown RBP18.9■□□□□ 0.62
PHRF1-203ENST00000416188 ATP10AO60312 1499 aa18.89■□□□□ 0.61
PHRF1-203ENST00000416188 EMILIN1Q9Y6C2 1016 aa18.89■□□□□ 0.61
PHRF1-203ENST00000416188 CPLX1O14810 134 aa18.88■□□□□ 0.61
PHRF1-203ENST00000416188 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
PHRF1-203ENST00000416188 GNL3LQ9NVN8 582 aaKnown RBP18.88■□□□□ 0.61
PHRF1-203ENST00000416188 CDCA7LQ96GN5 454 aa18.88■□□□□ 0.61
PHRF1-203ENST00000416188 CHMP5Q9NZZ3 219 aa18.88■□□□□ 0.61
PHRF1-203ENST00000416188 TBC1D2BQ9UPU7 963 aa18.88■□□□□ 0.61
PHRF1-203ENST00000416188 SURF6O75683 361 aaKnown RBP18.87■□□□□ 0.61
PHRF1-203ENST00000416188 KCNA6P17658 529 aa18.87■□□□□ 0.61
PHRF1-203ENST00000416188 INTS3Q68E01 1043 aaKnown RBP18.86■□□□□ 0.61
PHRF1-203ENST00000416188 ANKRD24Q8TF21 1146 aa18.86■□□□□ 0.61
PHRF1-203ENST00000416188 AK7Q96M32 723 aa18.86■□□□□ 0.61
PHRF1-203ENST00000416188 RNF20Q5VTR2 975 aa18.86■□□□□ 0.61
PHRF1-203ENST00000416188 CLASRPQ8N2M8 674 aaKnown RBP18.86■□□□□ 0.61
PHRF1-203ENST00000416188 DNAJC5Q9H3Z4 198 aa18.86■□□□□ 0.61
PHRF1-203ENST00000416188 VPS37CA5D8V6 355 aaPredicted RBP18.85■□□□□ 0.61
PHRF1-203ENST00000416188 SRCIN1Q9C0H9 1055 aa18.85■□□□□ 0.61
PHRF1-203ENST00000416188 ERICH2A1L162 156 aa18.85■□□□□ 0.61
PHRF1-203ENST00000416188 TRIM29Q14134 588 aa18.85■□□□□ 0.61
PHRF1-203ENST00000416188 CCDC57Q2TAC2 916 aa18.85■□□□□ 0.61
PHRF1-203ENST00000416188 C22orf23Q9BZE7 217 aa18.85■□□□□ 0.61
PHRF1-203ENST00000416188 GOLGA6L1Q8N7Z2 621 aa18.84■□□□□ 0.61
PHRF1-203ENST00000416188 CABLES1Q8TDN4 633 aa18.84■□□□□ 0.61
PHRF1-203ENST00000416188 A0A0U1RQG5 324 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-203ENST00000416188 RBM5P52756 815 aaKnown RBP eCLIP18.84■□□□□ 0.611e-6■■□□□ 13.2
PHRF1-203ENST00000416188 NFE2L2Q16236 605 aa18.84■□□□□ 0.61
PHRF1-203ENST00000416188 CTTNBP2Q8WZ74 1663 aa18.84■□□□□ 0.61
PHRF1-203ENST00000416188 CCAR1Q8IX12 1150 aaKnown RBP18.84■□□□□ 0.61
PHRF1-203ENST00000416188 CEP89Q96ST8 783 aa18.84■□□□□ 0.61
PHRF1-203ENST00000416188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.83■□□□□ 0.61
PHRF1-203ENST00000416188 BICD2Q8TD16 824 aa18.83■□□□□ 0.61
PHRF1-203ENST00000416188 TSR1Q2NL82 804 aaKnown RBP18.83■□□□□ 0.6
PHRF1-203ENST00000416188 NFXL1Q6ZNB6 911 aa18.82■□□□□ 0.6
PHRF1-203ENST00000416188 MCM10Q7L590 875 aa18.82■□□□□ 0.6
PHRF1-203ENST00000416188 ITSN2Q9NZM3 1697 aa18.82■□□□□ 0.6
PHRF1-203ENST00000416188 IFNL2Q8IZJ0 200 aa18.82■□□□□ 0.6
PHRF1-203ENST00000416188 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
PHRF1-203ENST00000416188 WWC1Q8IX03 1113 aa18.82■□□□□ 0.6
PHRF1-203ENST00000416188 CCAR2Q8N163 923 aaKnown RBP18.82■□□□□ 0.6
PHRF1-203ENST00000416188 MIS18AQ9NYP9 233 aa18.82■□□□□ 0.6
PHRF1-203ENST00000416188 DISP1Q96F81 1524 aa18.81■□□□□ 0.6
PHRF1-203ENST00000416188 SMC3Q9UQE7 1217 aa18.81■□□□□ 0.6
PHRF1-203ENST00000416188 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
PHRF1-203ENST00000416188 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
PHRF1-203ENST00000416188 IKQ13123 557 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-203ENST00000416188 DNAJC2Q99543 621 aaKnown RBP18.8■□□□□ 0.6
PHRF1-203ENST00000416188 CCDC158Q5M9N0 1113 aa18.8■□□□□ 0.6
PHRF1-203ENST00000416188 CCDC85AQ96PX6 553 aaPredicted RBP18.8■□□□□ 0.6
PHRF1-203ENST00000416188 DDB1Q16531 1140 aa18.8■□□□□ 0.6
PHRF1-203ENST00000416188 RSPH6AQ9H0K4 717 aa18.8■□□□□ 0.6
PHRF1-203ENST00000416188 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
PHRF1-203ENST00000416188 HSP90AA2PQ14568 343 aaPredicted RBP18.79■□□□□ 0.6
PHRF1-203ENST00000416188 GNAI2P04899 355 aa18.79■□□□□ 0.6
PHRF1-203ENST00000416188 TTC39AQ5SRH9 613 aa18.79■□□□□ 0.6
PHRF1-203ENST00000416188 SIL1Q9H173 461 aa18.79■□□□□ 0.6
PHRF1-203ENST00000416188 MTMR7Q9Y216 660 aa18.78■□□□□ 0.6
PHRF1-203ENST00000416188 TPM1P09493 284 aa18.78■□□□□ 0.6
PHRF1-203ENST00000416188 FOSBP53539 338 aa18.78■□□□□ 0.6
PHRF1-203ENST00000416188 RALYLQ86SE5 291 aaKnown RBP18.78■□□□□ 0.6
PHRF1-203ENST00000416188 ACSBG1Q96GR2 724 aa18.78■□□□□ 0.6
PHRF1-203ENST00000416188 CCT4P50991 539 aaKnown RBP18.78■□□□□ 0.6
PHRF1-203ENST00000416188 NUCB2P80303 420 aa18.78■□□□□ 0.6
PHRF1-203ENST00000416188 AAMPQ13685 434 aa18.78■□□□□ 0.6
PHRF1-203ENST00000416188 TAF7Q15545 349 aaPredicted RBP18.78■□□□□ 0.6
PHRF1-203ENST00000416188 FSD1Q9BTV5 496 aa18.78■□□□□ 0.6
PHRF1-203ENST00000416188 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
PHRF1-203ENST00000416188 TTC21AQ8NDW8 1320 aa18.78■□□□□ 0.6
PHRF1-203ENST00000416188 ERC1Q8IUD2 1116 aa18.77■□□□□ 0.6
PHRF1-203ENST00000416188 DCTN1Q14203 1278 aa18.77■□□□□ 0.59
PHRF1-203ENST00000416188 ZNF592Q92610 1267 aa18.77■□□□□ 0.59
PHRF1-203ENST00000416188 ZNF219Q9P2Y4 722 aaPredicted RBP18.77■□□□□ 0.59
PHRF1-203ENST00000416188 TTC21BQ7Z4L5 1316 aa18.77■□□□□ 0.59
PHRF1-203ENST00000416188 CDC45O75419 566 aa18.77■□□□□ 0.59
PHRF1-203ENST00000416188 THUMPD2Q9BTF0 503 aaKnown RBP18.76■□□□□ 0.59
PHRF1-203ENST00000416188 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
PHRF1-203ENST00000416188 TMPOP42166 694 aaKnown RBP18.76■□□□□ 0.59
PHRF1-203ENST00000416188 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
PHRF1-203ENST00000416188 WDR63Q8IWG1 891 aa18.75■□□□□ 0.59
PHRF1-203ENST00000416188 RFC4P35249 363 aa18.75■□□□□ 0.59
PHRF1-203ENST00000416188 NOB1Q9ULX3 412 aaKnown RBP18.75■□□□□ 0.59
PHRF1-203ENST00000416188 TNNT3P45378 269 aaPredicted RBP18.75■□□□□ 0.59
PHRF1-203ENST00000416188 TPM2P07951 284 aa18.74■□□□□ 0.59
PHRF1-203ENST00000416188 NEO1Q92859 1461 aa18.74■□□□□ 0.59
PHRF1-203ENST00000416188 NBPF14Q5TI25 921 aa18.74■□□□□ 0.59
PHRF1-203ENST00000416188 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
PHRF1-203ENST00000416188 TEX13AQ9BXU3 409 aaPredicted RBP18.73■□□□□ 0.59
PHRF1-203ENST00000416188 CEP126Q9P2H0 1117 aa18.73■□□□□ 0.59
PHRF1-203ENST00000416188 NINLQ9Y2I6 1382 aa18.73■□□□□ 0.59
PHRF1-203ENST00000416188 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
PHRF1-203ENST00000416188 DUSP27Q5VZP5 1158 aa18.73■□□□□ 0.59
PHRF1-203ENST00000416188 SLC3A2P08195 630 aaKnown RBP18.72■□□□□ 0.59
PHRF1-203ENST00000416188 PCMTD1Q96MG8 357 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms