RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
LMCD1-203ENST00000415597 CARD10Q9BWT7 1032 aa15.16■□□□□ 0.02
LMCD1-203ENST00000415597 SLIT3O75094 1523 aa15.16■□□□□ 0.02
LMCD1-203ENST00000415597 OVOS2A0A0G2JMS6 1433 aa15.16■□□□□ 0.02
LMCD1-203ENST00000415597 OVOS2A0A0J9YW53 1432 aa15.16■□□□□ 0.02
LMCD1-203ENST00000415597 OVOS2Q6IE36 1432 aa15.16■□□□□ 0.02
LMCD1-203ENST00000415597 AXIN2Q9Y2T1 843 aa15.15■□□□□ 0.02
LMCD1-203ENST00000415597 CPSF1Q10570 1443 aaKnown RBP15.15■□□□□ 0.02
LMCD1-203ENST00000415597 LMO7Q8WWI1 1683 aa15.15■□□□□ 0.02
LMCD1-203ENST00000415597 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
LMCD1-203ENST00000415597 CCDC7Q96M83 1385 aa15.13■□□□□ 0.01
LMCD1-203ENST00000415597 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
LMCD1-203ENST00000415597 SLC12A5Q9H2X9 1139 aa15.13■□□□□ 0.01
LMCD1-203ENST00000415597 PLSCR1O15162 318 aa15.12■□□□□ 0.01
LMCD1-203ENST00000415597 NLRP2Q9NX02 1062 aa15.12■□□□□ 0.01
LMCD1-203ENST00000415597 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
LMCD1-203ENST00000415597 USP31Q70CQ4 1352 aa15.11■□□□□ 0.01
LMCD1-203ENST00000415597 NME9Q86XW9 330 aa15.1■□□□□ 0.01
LMCD1-203ENST00000415597 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
LMCD1-203ENST00000415597 SPON1Q9HCB6 807 aa15.09■□□□□ 0.01
LMCD1-203ENST00000415597 LRP5O75197 1615 aa15.09■□□□□ 0.01
LMCD1-203ENST00000415597 PIK3C2AO00443 1686 aa15.09■□□□□ 0.01
LMCD1-203ENST00000415597 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
LMCD1-203ENST00000415597 EDC4Q6P2E9 1401 aaKnown RBP15.09■□□□□ 0.01
LMCD1-203ENST00000415597 ST20-MTHFSA0A0A6YYL1 179 aa15.08■□□□□ 0
LMCD1-203ENST00000415597 CDCA8Q53HL2 280 aa15.08■□□□□ 0
LMCD1-203ENST00000415597 MARCH10Q8NA82 808 aaPredicted RBP15.08■□□□□ 0
LMCD1-203ENST00000415597 COG3Q96JB2 828 aa15.08■□□□□ 0
LMCD1-203ENST00000415597 TNS1Q9HBL0 1735 aaKnown RBP15.08■□□□□ 0
LMCD1-203ENST00000415597 PARP4Q9UKK3 1724 aaKnown RBP15.08■□□□□ 0
LMCD1-203ENST00000415597 IL2RBP14784 551 aa15.07■□□□□ 0
LMCD1-203ENST00000415597 TMF1P82094 1093 aa15.07■□□□□ 0
LMCD1-203ENST00000415597 ANKRD24Q8TF21 1146 aa15.07■□□□□ 0
LMCD1-203ENST00000415597 AKAP12Q02952 1782 aa15.06■□□□□ 0
LMCD1-203ENST00000415597 ERBB3P21860 1342 aa15.06■□□□□ 0
LMCD1-203ENST00000415597 KCNQ2O43526 872 aa15.05■□□□□ -0
LMCD1-203ENST00000415597 AMPHP49418 695 aa15.05■□□□□ -0
LMCD1-203ENST00000415597 ABCC6O95255 1503 aa15.05■□□□□ -0
LMCD1-203ENST00000415597 BCL9O00512 1426 aa15.04■□□□□ -0
LMCD1-203ENST00000415597 A0A1W2PP64 1363 aa15.04■□□□□ -0
LMCD1-203ENST00000415597 STK32BQ9NY57 414 aa15.04■□□□□ -0
LMCD1-203ENST00000415597 SRCAPQ6ZRS2 3230 aa15.04■□□□□ -0
LMCD1-203ENST00000415597 COL18A1P39060 1754 aa15.03■□□□□ -0
LMCD1-203ENST00000415597 IP6K1Q92551 441 aa15.03■□□□□ -0
LMCD1-203ENST00000415597 TESK2Q96S53 571 aa15.03■□□□□ -0
LMCD1-203ENST00000415597 NFAT5O94916 1531 aa15.02■□□□□ -0
LMCD1-203ENST00000415597 TXNRD1Q16881 649 aa15.02■□□□□ -0
LMCD1-203ENST00000415597 LTV1Q96GA3 475 aaPredicted RBP15.02■□□□□ -0
LMCD1-203ENST00000415597 MON2Q7Z3U7 1717 aa15.01□□□□□ -0.01
LMCD1-203ENST00000415597 TIMELESSQ9UNS1 1208 aa15.01□□□□□ -0.01
LMCD1-203ENST00000415597 CD163L1Q9NR16 1453 aa15.01□□□□□ -0.01
LMCD1-203ENST00000415597 LRRC37A3O60309 1634 aa15□□□□□ -0.01
LMCD1-203ENST00000415597 ACSBG1Q96GR2 724 aa15□□□□□ -0.01
LMCD1-203ENST00000415597 TNS2Q63HR2 1409 aa15□□□□□ -0.01
LMCD1-203ENST00000415597 DDX54Q8TDD1 881 aaKnown RBP14.99□□□□□ -0.01
LMCD1-203ENST00000415597 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
LMCD1-203ENST00000415597 PTF1AQ7RTS3 328 aa14.98□□□□□ -0.01
LMCD1-203ENST00000415597 USP47Q96K76 1375 aa14.98□□□□□ -0.01
LMCD1-203ENST00000415597 RREB1Q92766 1687 aa14.97□□□□□ -0.01
LMCD1-203ENST00000415597 SLC15A2Q16348 729 aa14.97□□□□□ -0.01
LMCD1-203ENST00000415597 PROM2Q8N271 834 aa14.97□□□□□ -0.01
LMCD1-203ENST00000415597 RGPD5Q99666 1765 aa14.97□□□□□ -0.01
LMCD1-203ENST00000415597 HMGB2P26583 209 aaKnown RBP14.96□□□□□ -0.01
LMCD1-203ENST00000415597 HOXC9P31274 260 aa14.96□□□□□ -0.01
LMCD1-203ENST00000415597 NUP188Q5SRE5 1749 aa14.96□□□□□ -0.01
LMCD1-203ENST00000415597 PEAK1Q9H792 1746 aa14.96□□□□□ -0.01
LMCD1-203ENST00000415597 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
LMCD1-203ENST00000415597 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
LMCD1-203ENST00000415597 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
LMCD1-203ENST00000415597 SMG6Q86US8 1419 aaKnown RBP14.94□□□□□ -0.02
LMCD1-203ENST00000415597 FYB1O15117 783 aa14.94□□□□□ -0.02
LMCD1-203ENST00000415597 ZBTB7AO95365 584 aa14.94□□□□□ -0.02
LMCD1-203ENST00000415597 ZCRB1Q8TBF4 217 aaKnown RBP14.94□□□□□ -0.02
LMCD1-203ENST00000415597 RAPGEF4Q8WZA2 1011 aa14.94□□□□□ -0.02
LMCD1-203ENST00000415597 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
LMCD1-203ENST00000415597 GGNBP2Q9H3C7 697 aa14.94□□□□□ -0.02
LMCD1-203ENST00000415597 KAT6BQ8WYB5 2073 aa14.94□□□□□ -0.02
LMCD1-203ENST00000415597 SBF2Q86WG5 1849 aa14.94□□□□□ -0.02
LMCD1-203ENST00000415597 CLSPNQ9HAW4 1339 aa14.93□□□□□ -0.02
LMCD1-203ENST00000415597 RGPD3A6NKT7 1758 aaPredicted RBP14.93□□□□□ -0.02
LMCD1-203ENST00000415597 RGPD4Q7Z3J3 1758 aa14.93□□□□□ -0.02
LMCD1-203ENST00000415597 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
LMCD1-203ENST00000415597 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
LMCD1-203ENST00000415597 CGNL1Q0VF96 1302 aa14.92□□□□□ -0.02
LMCD1-203ENST00000415597 WNK3Q9BYP7 1800 aa14.92□□□□□ -0.02
LMCD1-203ENST00000415597 MTFR1LQ9H019 292 aa14.92□□□□□ -0.02
LMCD1-203ENST00000415597 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
LMCD1-203ENST00000415597 RTL1A6NKG5 1358 aa14.92□□□□□ -0.02
LMCD1-203ENST00000415597 LTN1O94822 1766 aa14.92□□□□□ -0.02
LMCD1-203ENST00000415597 TATP17735 454 aaPredicted RBP14.91□□□□□ -0.02
LMCD1-203ENST00000415597 RRS1Q15050 365 aaKnown RBP14.91□□□□□ -0.02
LMCD1-203ENST00000415597 FBLN1P23142 703 aa14.9□□□□□ -0.02
LMCD1-203ENST00000415597 YY1P25490 414 aa14.9□□□□□ -0.02
LMCD1-203ENST00000415597 PRIM1P49642 420 aaKnown RBP14.89□□□□□ -0.03
LMCD1-203ENST00000415597 SLC16A10Q8TF71 515 aa14.88□□□□□ -0.03
LMCD1-203ENST00000415597 POLR3GLQ9BT43 218 aa14.88□□□□□ -0.03
LMCD1-203ENST00000415597 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
LMCD1-203ENST00000415597 PPM1GO15355 546 aaPredicted RBP14.87□□□□□ -0.03
LMCD1-203ENST00000415597 NBPF6Q5VWK0 638 aa14.87□□□□□ -0.03
LMCD1-203ENST00000415597 NBPF4Q96M43 638 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms