RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 AXIN2Q9Y2T1 843 aa35.11■■■■□ 3.21
HLA-C-204ENST00000415537 RGPD5Q99666 1765 aa35.1■■■■□ 3.21
HLA-C-204ENST00000415537 EDC4Q6P2E9 1401 aaKnown RBP35.1■■■■□ 3.21
HLA-C-204ENST00000415537 USP31Q70CQ4 1352 aa35.1■■■■□ 3.21
HLA-C-204ENST00000415537 NME9Q86XW9 330 aa35.09■■■■□ 3.21
HLA-C-204ENST00000415537 A0A1W2PP64 1363 aa35.09■■■■□ 3.21
HLA-C-204ENST00000415537 NINLQ9Y2I6 1382 aa35.09■■■■□ 3.21
HLA-C-204ENST00000415537 NFAT5O94916 1531 aa35.08■■■■□ 3.21
HLA-C-204ENST00000415537 USP47Q96K76 1375 aa35.08■■■■□ 3.21
HLA-C-204ENST00000415537 USP54Q70EL1 1684 aa35.07■■■■□ 3.2
HLA-C-204ENST00000415537 WDR17Q8IZU2 1322 aa35.06■■■■□ 3.2
HLA-C-204ENST00000415537 PARP4Q9UKK3 1724 aaKnown RBP35.06■■■■□ 3.2
HLA-C-204ENST00000415537 CSB-PGBD3P0DP91 1061 aa35.05■■■■□ 3.2
HLA-C-204ENST00000415537 TMF1P82094 1093 aa35.05■■■■□ 3.2
HLA-C-204ENST00000415537 TRIM37O94972 964 aa35.03■■■■□ 3.2
HLA-C-204ENST00000415537 EN1Q05925 392 aaPredicted RBP35.03■■■■□ 3.2
HLA-C-204ENST00000415537 TNS1Q9HBL0 1735 aaKnown RBP35.03■■■■□ 3.2
HLA-C-204ENST00000415537 ABCC6O95255 1503 aa35■■■■□ 3.19
HLA-C-204ENST00000415537 LTN1O94822 1766 aa34.99■■■■□ 3.19
HLA-C-204ENST00000415537 DDB1Q16531 1140 aa34.97■■■■□ 3.19
HLA-C-204ENST00000415537 DISP2A7MBM2 1401 aa34.97■■■■□ 3.19
HLA-C-204ENST00000415537 CDCA7Q9BWT1 371 aaPredicted RBP34.96■■■■□ 3.19
HLA-C-204ENST00000415537 CARD10Q9BWT7 1032 aa34.96■■■■□ 3.19
HLA-C-204ENST00000415537 WNK3Q9BYP7 1800 aa34.96■■■■□ 3.19
HLA-C-204ENST00000415537 C11orf95C9JLR9 678 aaPredicted RBP34.95■■■■□ 3.19
HLA-C-204ENST00000415537 CDCA8Q53HL2 280 aa34.95■■■■□ 3.19
HLA-C-204ENST00000415537 APBA3O96018 575 aa34.94■■■■□ 3.18
HLA-C-204ENST00000415537 LRRC37A3O60309 1634 aa34.93■■■■□ 3.18
HLA-C-204ENST00000415537 OVOS2A0A0J9YW53 1432 aa34.92■■■■□ 3.18
HLA-C-204ENST00000415537 OVOS2Q6IE36 1432 aa34.92■■■■□ 3.18
HLA-C-204ENST00000415537 ANKRD36BQ8N2N9 1353 aa34.92■■■■□ 3.18
HLA-C-204ENST00000415537 EZH2Q15910 746 aaKnown RBP34.9■■■■□ 3.18
HLA-C-204ENST00000415537 CCER1Q8TC90 406 aaPredicted RBP34.9■■■■□ 3.18
HLA-C-204ENST00000415537 COG3Q96JB2 828 aa34.9■■■■□ 3.18
HLA-C-204ENST00000415537 OVOS2A0A0G2JMS6 1433 aa34.89■■■■□ 3.18
HLA-C-204ENST00000415537 CCDC7Q96M83 1385 aa34.89■■■■□ 3.18
HLA-C-204ENST00000415537 ERBB3P21860 1342 aa34.87■■■■□ 3.17
HLA-C-204ENST00000415537 CAMKK2Q96RR4 588 aa34.87■■■■□ 3.17
HLA-C-204ENST00000415537 NLRP2Q9NX02 1062 aa34.85■■■■□ 3.17
HLA-C-204ENST00000415537 PARD3Q8TEW0 1356 aa34.84■■■■□ 3.17
HLA-C-204ENST00000415537 PEAK1Q9H792 1746 aa34.84■■■■□ 3.17
HLA-C-204ENST00000415537 PSDA5PKW4 1024 aaPredicted RBP34.83■■■■□ 3.17
HLA-C-204ENST00000415537 EXOC5O00471 708 aa34.83■■■■□ 3.17
HLA-C-204ENST00000415537 ANKRD24Q8TF21 1146 aa34.83■■■■□ 3.17
HLA-C-204ENST00000415537 SBF2Q86WG5 1849 aa34.81■■■■□ 3.16
HLA-C-204ENST00000415537 IP6K1Q92551 441 aa34.8■■■■□ 3.16
HLA-C-204ENST00000415537 MARCH10Q8NA82 808 aaPredicted RBP34.79■■■■□ 3.16
HLA-C-204ENST00000415537 SRCAPQ6ZRS2 3230 aa34.77■■■■□ 3.16
HLA-C-204ENST00000415537 FYB1O15117 783 aa34.75■■■■□ 3.15
HLA-C-204ENST00000415537 AMPHP49418 695 aa34.75■■■■□ 3.15
HLA-C-204ENST00000415537 R3HDM1Q15032 1099 aaKnown RBP34.75■■■■□ 3.15
HLA-C-204ENST00000415537 GGNBP2Q9H3C7 697 aa34.75■■■■□ 3.15
HLA-C-204ENST00000415537 RREB1Q92766 1687 aa34.74■■■■□ 3.15
HLA-C-204ENST00000415537 IL2RBP14784 551 aa34.74■■■■□ 3.15
HLA-C-204ENST00000415537 LTV1Q96GA3 475 aaPredicted RBP34.73■■■■□ 3.15
HLA-C-204ENST00000415537 MAP3K19Q56UN5 1328 aa34.73■■■■□ 3.15
HLA-C-204ENST00000415537 KIF20BQ96Q89 1820 aa34.72■■■■□ 3.15
HLA-C-204ENST00000415537 FBLN1P23142 703 aa34.72■■■■□ 3.15
HLA-C-204ENST00000415537 BCL11BQ9C0K0 894 aaPredicted RBP34.72■■■■□ 3.15
HLA-C-204ENST00000415537 FAM208AQ9UK61 1670 aaKnown RBP34.72■■■■□ 3.15
HLA-C-204ENST00000415537 BCL9O00512 1426 aa34.72■■■■□ 3.15
HLA-C-204ENST00000415537 TNS2Q63HR2 1409 aa34.72■■■■□ 3.15
HLA-C-204ENST00000415537 MYOM1P52179 1685 aa34.71■■■■□ 3.15
HLA-C-204ENST00000415537 HOXC9P31274 260 aa34.7■■■■□ 3.15
HLA-C-204ENST00000415537 NBPF14Q5TI25 921 aa34.7■■■■□ 3.15
HLA-C-204ENST00000415537 NUP188Q5SRE5 1749 aa34.69■■■■□ 3.14
HLA-C-204ENST00000415537 PLSCR1O15162 318 aa34.67■■■■□ 3.14
HLA-C-204ENST00000415537 EIF4G2P78344 907 aaKnown RBP eCLIP34.67■■■■□ 3.14
HLA-C-204ENST00000415537 POLR3GLQ9BT43 218 aa34.66■■■■□ 3.14
HLA-C-204ENST00000415537 RGPD3A6NKT7 1758 aaPredicted RBP34.66■■■■□ 3.14
HLA-C-204ENST00000415537 RGPD4Q7Z3J3 1758 aa34.66■■■■□ 3.14
HLA-C-204ENST00000415537 LRP5O75197 1615 aa34.66■■■■□ 3.14
HLA-C-204ENST00000415537 RRS1Q15050 365 aaKnown RBP34.65■■■■□ 3.14
HLA-C-204ENST00000415537 RTL1A6NKG5 1358 aa34.63■■■■□ 3.13
HLA-C-204ENST00000415537 PTF1AQ7RTS3 328 aa34.63■■■■□ 3.13
HLA-C-204ENST00000415537 CARD14Q9BXL6 1004 aa34.63■■■■□ 3.13
HLA-C-204ENST00000415537 NSD3Q9BZ95 1437 aa34.63■■■■□ 3.13
HLA-C-204ENST00000415537 KAT6BQ8WYB5 2073 aa34.59■■■■□ 3.13
HLA-C-204ENST00000415537 RGPD2P0DJD1 1756 aa34.59■■■■□ 3.13
HLA-C-204ENST00000415537 HSPA5P11021 654 aaKnown RBP34.59■■■■□ 3.13
HLA-C-204ENST00000415537 SMG6Q86US8 1419 aaKnown RBP34.56■■■■□ 3.12
HLA-C-204ENST00000415537 ACSBG1Q96GR2 724 aa34.56■■■■□ 3.12
HLA-C-204ENST00000415537 KCNQ2O43526 872 aa34.55■■■■□ 3.12
HLA-C-204ENST00000415537 NHSQ6T4R5 1651 aa34.54■■■■□ 3.12
HLA-C-204ENST00000415537 DDX54Q8TDD1 881 aaKnown RBP34.53■■■■□ 3.12
HLA-C-204ENST00000415537 CGNL1Q0VF96 1302 aa34.53■■■■□ 3.12
HLA-C-204ENST00000415537 FLT4P35916 1363 aa34.51■■■■□ 3.12
HLA-C-204ENST00000415537 KIF24Q5T7B8 1368 aa34.5■■■■□ 3.11
HLA-C-204ENST00000415537 HSP90AB2PQ58FF8 381 aa34.49■■■■□ 3.11
HLA-C-204ENST00000415537 NBPF6Q5VWK0 638 aa34.49■■■■□ 3.11
HLA-C-204ENST00000415537 NBPF4Q96M43 638 aa34.49■■■■□ 3.11
HLA-C-204ENST00000415537 INSRP06213 1382 aa34.49■■■■□ 3.11
HLA-C-204ENST00000415537 PROM2Q8N271 834 aa34.48■■■■□ 3.11
HLA-C-204ENST00000415537 TXNRD1Q16881 649 aa34.47■■■■□ 3.11
HLA-C-204ENST00000415537 ZCRB1Q8TBF4 217 aaKnown RBP34.46■■■■□ 3.11
HLA-C-204ENST00000415537 USHBP1Q8N6Y0 703 aa34.45■■■■□ 3.11
HLA-C-204ENST00000415537 EMILIN1Q9Y6C2 1016 aa34.45■■■■□ 3.11
HLA-C-204ENST00000415537 BTAF1O14981 1849 aa34.44■■■■□ 3.1
HLA-C-204ENST00000415537 MAP2P11137 1827 aaKnown RBP34.44■■■■□ 3.1
HLA-C-204ENST00000415537 PPM1GO15355 546 aaPredicted RBP34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms