RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 RGPD5Q99666 1765 aa15□□□□□ -0.01
LINC00330-201ENST00000414562 SHPRHQ149N8 1683 aa14.99□□□□□ -0.01
LINC00330-201ENST00000414562 PPM1GO15355 546 aaPredicted RBP14.99□□□□□ -0.01
LINC00330-201ENST00000414562 HSP90AB2PQ58FF8 381 aa14.99□□□□□ -0.01
LINC00330-201ENST00000414562 INSRP06213 1382 aa14.99□□□□□ -0.01
LINC00330-201ENST00000414562 NEFLP07196 543 aa14.99□□□□□ -0.01
LINC00330-201ENST00000414562 ADAMTS8Q9UP79 889 aa14.99□□□□□ -0.01
LINC00330-201ENST00000414562 CHRNA2Q15822 529 aa14.98□□□□□ -0.01
LINC00330-201ENST00000414562 KIAA0232Q92628 1395 aa14.97□□□□□ -0.01
LINC00330-201ENST00000414562 BLMP54132 1417 aaPredicted RBP14.97□□□□□ -0.01
LINC00330-201ENST00000414562 ZBTB7CA1YPR0 619 aa14.97□□□□□ -0.01
LINC00330-201ENST00000414562 CFAP53Q96M91 514 aa14.97□□□□□ -0.01
LINC00330-201ENST00000414562 SALL2Q9Y467 1007 aaPredicted RBP14.97□□□□□ -0.01
LINC00330-201ENST00000414562 HOXC9P31274 260 aa14.96□□□□□ -0.01
LINC00330-201ENST00000414562 KCNH5Q8NCM2 988 aa14.95□□□□□ -0.02
LINC00330-201ENST00000414562 FAM83GA6ND36 823 aa14.95□□□□□ -0.02
LINC00330-201ENST00000414562 CDK12Q9NYV4 1490 aaPredicted RBP14.95□□□□□ -0.02
LINC00330-201ENST00000414562 RGPD2P0DJD1 1756 aa14.94□□□□□ -0.02
LINC00330-201ENST00000414562 IL13P35225 146 aa14.93□□□□□ -0.02
LINC00330-201ENST00000414562 EIF4A2Q14240 407 aaKnown RBP14.93□□□□□ -0.02
LINC00330-201ENST00000414562 IP6K1Q92551 441 aa14.93□□□□□ -0.02
LINC00330-201ENST00000414562 LRP6O75581 1613 aa14.93□□□□□ -0.02
LINC00330-201ENST00000414562 CAMTA1Q9Y6Y1 1673 aa14.93□□□□□ -0.02
LINC00330-201ENST00000414562 CPDO75976 1380 aa14.93□□□□□ -0.02
LINC00330-201ENST00000414562 NUTM2BA6NNL0 878 aaPredicted RBP14.93□□□□□ -0.02
LINC00330-201ENST00000414562 NUTM2EB1AL46 878 aaPredicted RBP14.93□□□□□ -0.02
LINC00330-201ENST00000414562 NUTM2AQ8IVF1 878 aaPredicted RBP14.93□□□□□ -0.02
LINC00330-201ENST00000414562 SUPT16HQ9Y5B9 1047 aaKnown RBP14.93□□□□□ -0.02
LINC00330-201ENST00000414562 LMO7Q8WWI1 1683 aa14.92□□□□□ -0.02
LINC00330-201ENST00000414562 JCADQ9P266 1359 aa14.92□□□□□ -0.02
LINC00330-201ENST00000414562 AMPHP49418 695 aa14.92□□□□□ -0.02
LINC00330-201ENST00000414562 FLT4P35916 1363 aa14.92□□□□□ -0.02
LINC00330-201ENST00000414562 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
LINC00330-201ENST00000414562 FKBP8Q14318 412 aa14.92□□□□□ -0.02
LINC00330-201ENST00000414562 LTV1Q96GA3 475 aaPredicted RBP14.91□□□□□ -0.02
LINC00330-201ENST00000414562 NUDCQ9Y266 331 aa14.91□□□□□ -0.02
LINC00330-201ENST00000414562 RGPD1P0DJD0 1748 aa14.9□□□□□ -0.02
LINC00330-201ENST00000414562 PDE3BQ13370 1112 aa14.9□□□□□ -0.02
LINC00330-201ENST00000414562 CCDC146Q8IYE0 955 aa14.9□□□□□ -0.02
LINC00330-201ENST00000414562 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
LINC00330-201ENST00000414562 DIAPH1O60610 1272 aaKnown RBP14.89□□□□□ -0.03
LINC00330-201ENST00000414562 PRDM11Q9NQV5 511 aa14.89□□□□□ -0.03
LINC00330-201ENST00000414562 AEBP1Q8IUX7 1158 aa14.88□□□□□ -0.03
LINC00330-201ENST00000414562 RTL1A6NKG5 1358 aa14.88□□□□□ -0.03
LINC00330-201ENST00000414562 HAP1P54257 671 aaPredicted RBP14.88□□□□□ -0.03
LINC00330-201ENST00000414562 EYA1Q99502 592 aa14.88□□□□□ -0.03
LINC00330-201ENST00000414562 KIF24Q5T7B8 1368 aa14.88□□□□□ -0.03
LINC00330-201ENST00000414562 NBPF6Q5VWK0 638 aa14.87□□□□□ -0.03
LINC00330-201ENST00000414562 USHBP1Q8N6Y0 703 aa14.87□□□□□ -0.03
LINC00330-201ENST00000414562 NBPF4Q96M43 638 aa14.87□□□□□ -0.03
LINC00330-201ENST00000414562 ANKRD24Q8TF21 1146 aa14.87□□□□□ -0.03
LINC00330-201ENST00000414562 U2SURPO15042 1029 aaKnown RBP14.86□□□□□ -0.03
LINC00330-201ENST00000414562 HMOX1P09601 288 aa14.86□□□□□ -0.03
LINC00330-201ENST00000414562 ERBB3P21860 1342 aa14.85□□□□□ -0.03
LINC00330-201ENST00000414562 COL14A1Q05707 1796 aaKnown RBP14.85□□□□□ -0.03
LINC00330-201ENST00000414562 PLCH1Q4KWH8 1693 aa14.85□□□□□ -0.03
LINC00330-201ENST00000414562 COL5A2P05997 1499 aaPredicted RBP14.85□□□□□ -0.03
LINC00330-201ENST00000414562 APAF1O14727 1248 aa14.85□□□□□ -0.03
LINC00330-201ENST00000414562 BTG4Q9NY30 223 aa14.85□□□□□ -0.03
LINC00330-201ENST00000414562 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
LINC00330-201ENST00000414562 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.03
LINC00330-201ENST00000414562 PLEKHF1Q96S99 279 aa14.83□□□□□ -0.03
LINC00330-201ENST00000414562 SPATA31A6Q5VVP1 1343 aa14.83□□□□□ -0.04
LINC00330-201ENST00000414562 IGSF1Q8N6C5 1336 aa14.83□□□□□ -0.04
LINC00330-201ENST00000414562 NRAPQ86VF7 1730 aa14.83□□□□□ -0.04
LINC00330-201ENST00000414562 LARP1Q6PKG0 1096 aaKnown RBP14.83□□□□□ -0.04
LINC00330-201ENST00000414562 RUNDC1Q96C34 613 aa14.83□□□□□ -0.04
LINC00330-201ENST00000414562 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.04
LINC00330-201ENST00000414562 FAM208AQ9UK61 1670 aaKnown RBP14.82□□□□□ -0.04
LINC00330-201ENST00000414562 SLIT2O94813 1529 aa14.82□□□□□ -0.04
LINC00330-201ENST00000414562 ABCC6O95255 1503 aa14.82□□□□□ -0.04
LINC00330-201ENST00000414562 SULT6B1Q6IMI4 303 aa14.82□□□□□ -0.04
LINC00330-201ENST00000414562 PHACTR3Q96KR7 559 aa14.82□□□□□ -0.04
LINC00330-201ENST00000414562 NGEFQ8N5V2 710 aa14.82□□□□□ -0.04
LINC00330-201ENST00000414562 CDCA7LQ96GN5 454 aa14.82□□□□□ -0.04
LINC00330-201ENST00000414562 STRN4Q9NRL3 753 aa14.82□□□□□ -0.04
LINC00330-201ENST00000414562 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
LINC00330-201ENST00000414562 BCL9LQ86UU0 1499 aa14.81□□□□□ -0.04
LINC00330-201ENST00000414562 IRX6P78412 446 aaPredicted RBP14.81□□□□□ -0.04
LINC00330-201ENST00000414562 C8orf37Q96NL8 207 aa14.81□□□□□ -0.04
LINC00330-201ENST00000414562 RTN4Q9NQC3 1192 aaKnown RBP14.81□□□□□ -0.04
LINC00330-201ENST00000414562 KDRP35968 1356 aa14.8□□□□□ -0.04
LINC00330-201ENST00000414562 WDR17Q8IZU2 1322 aa14.8□□□□□ -0.04
LINC00330-201ENST00000414562 PRKAR2BP31323 418 aa14.79□□□□□ -0.04
LINC00330-201ENST00000414562 GOLGA2Q08379 1002 aa14.79□□□□□ -0.04
LINC00330-201ENST00000414562 FNBP4Q8N3X1 1017 aaPredicted RBP14.78□□□□□ -0.04
LINC00330-201ENST00000414562 NLRP2Q9NX02 1062 aa14.78□□□□□ -0.04
LINC00330-201ENST00000414562 NGLY1Q96IV0 654 aa14.78□□□□□ -0.04
LINC00330-201ENST00000414562 NEUROD2Q15784 382 aa14.77□□□□□ -0.04
LINC00330-201ENST00000414562 TCP11L2Q8N4U5 519 aa14.77□□□□□ -0.04
LINC00330-201ENST00000414562 ZNF521Q96K83 1311 aa14.77□□□□□ -0.04
LINC00330-201ENST00000414562 NWD2Q9ULI1 1742 aa14.77□□□□□ -0.04
LINC00330-201ENST00000414562 FCHSD2O94868 740 aa14.76□□□□□ -0.05
LINC00330-201ENST00000414562 CSB-PGBD3P0DP91 1061 aa14.76□□□□□ -0.05
LINC00330-201ENST00000414562 PNNQ9H307 717 aaKnown RBP14.76□□□□□ -0.05
LINC00330-201ENST00000414562 RCAN3Q9UKA8 241 aa14.76□□□□□ -0.05
LINC00330-201ENST00000414562 RRP7AQ9Y3A4 280 aaKnown RBP14.76□□□□□ -0.05
LINC00330-201ENST00000414562 MEGF6O75095 1541 aa14.76□□□□□ -0.05
LINC00330-201ENST00000414562 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
LINC00330-201ENST00000414562 UBE2Q2Q8WVN8 375 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms