RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 C9orf84Q5VXU9 1444 aa12.61□□□□□ -0.39
SCN5A-204ENST00000414099 ERLIN1O75477 346 aa12.61□□□□□ -0.39
SCN5A-204ENST00000414099 CCDC57Q2TAC2 916 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 AQRO60306 1485 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCN5A-204ENST00000414099 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 CDKL5O76039 1030 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 C22orf23Q9BZE7 217 aa12.6□□□□□ -0.39
SCN5A-204ENST00000414099 TMOD2Q9NZR1 351 aa12.59□□□□□ -0.39
SCN5A-204ENST00000414099 HMGXB3Q12766 1538 aa12.59□□□□□ -0.39
SCN5A-204ENST00000414099 IGF1RP08069 1367 aa12.59□□□□□ -0.39
SCN5A-204ENST00000414099 SMC2O95347 1197 aa12.59□□□□□ -0.39
SCN5A-204ENST00000414099 STARD3NLO95772 234 aa12.59□□□□□ -0.39
SCN5A-204ENST00000414099 MTHFSP49914 203 aa12.59□□□□□ -0.39
SCN5A-204ENST00000414099 AXDND1Q5T1B0 1012 aaPredicted RBP12.58□□□□□ -0.4
SCN5A-204ENST00000414099 CCDC181Q5TID7 509 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 TOP2BQ02880 1626 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 RTEL1-TNFRSF6BF6WH68 1400 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 TRIM5Q9C035 493 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 ATAD2Q6PL18 1390 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 DEF6Q9H4E7 631 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.4
SCN5A-204ENST00000414099 RBM5P52756 815 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCN5A-204ENST00000414099 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
SCN5A-204ENST00000414099 PPFIBP1Q86W92 1011 aa12.57□□□□□ -0.4
SCN5A-204ENST00000414099 GCC1Q96CN9 775 aa12.57□□□□□ -0.4
SCN5A-204ENST00000414099 MPHOSPH10O00566 681 aaKnown RBP12.57□□□□□ -0.4
SCN5A-204ENST00000414099 SURF6O75683 361 aaKnown RBP12.57□□□□□ -0.4
SCN5A-204ENST00000414099 CCDC141Q6ZP82 1450 aa12.57□□□□□ -0.4
SCN5A-204ENST00000414099 CCDC91Q7Z6B0 441 aa12.57□□□□□ -0.4
SCN5A-204ENST00000414099 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
SCN5A-204ENST00000414099 CCDC69A6NI79 296 aa12.57□□□□□ -0.4
SCN5A-204ENST00000414099 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
SCN5A-204ENST00000414099 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
SCN5A-204ENST00000414099 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
SCN5A-204ENST00000414099 CTNNA3Q9UI47 895 aa12.56□□□□□ -0.4
SCN5A-204ENST00000414099 NOL7Q9UMY1 257 aaKnown RBP12.56□□□□□ -0.4
SCN5A-204ENST00000414099 GGNBP2Q9H3C7 697 aa12.56□□□□□ -0.4
SCN5A-204ENST00000414099 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
SCN5A-204ENST00000414099 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
SCN5A-204ENST00000414099 TNIP1Q15025 636 aa12.56□□□□□ -0.4
SCN5A-204ENST00000414099 JAKMIP3Q5VZ66 844 aa12.56□□□□□ -0.4
SCN5A-204ENST00000414099 HDGFL1Q5TGJ6 251 aa12.55□□□□□ -0.4
SCN5A-204ENST00000414099 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
SCN5A-204ENST00000414099 TAF3Q5VWG9 929 aa12.55□□□□□ -0.4
SCN5A-204ENST00000414099 SLC26A8Q96RN1 970 aa12.55□□□□□ -0.4
SCN5A-204ENST00000414099 IQGAP2Q13576 1575 aa12.55□□□□□ -0.4
SCN5A-204ENST00000414099 IGHMBP2P38935 993 aaKnown RBP12.55□□□□□ -0.4
SCN5A-204ENST00000414099 DNAJC2Q99543 621 aaKnown RBP12.55□□□□□ -0.4
SCN5A-204ENST00000414099 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
SCN5A-204ENST00000414099 LNPKQ9C0E8 428 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 FAM135AQ9P2D6 1515 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 FEZ1Q99689 392 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 CDK19Q9BWU1 502 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 PDCL3Q9H2J4 239 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
SCN5A-204ENST00000414099 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
SCN5A-204ENST00000414099 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
SCN5A-204ENST00000414099 WASF1Q92558 559 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 ZNF428Q96B54 188 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 SYNJ1O43426 1573 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
SCN5A-204ENST00000414099 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
SCN5A-204ENST00000414099 ANKRD62A6NC57 917 aa12.53□□□□□ -0.4
SCN5A-204ENST00000414099 ZPR1O75312 459 aa12.53□□□□□ -0.4
SCN5A-204ENST00000414099 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
SCN5A-204ENST00000414099 MCM3P25205 808 aa12.53□□□□□ -0.4
SCN5A-204ENST00000414099 CETN2P41208 172 aa12.53□□□□□ -0.4
SCN5A-204ENST00000414099 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
SCN5A-204ENST00000414099 MTMR7Q9Y216 660 aa12.53□□□□□ -0.4
SCN5A-204ENST00000414099 STAMBPO95630 424 aa12.52□□□□□ -0.4
SCN5A-204ENST00000414099 DDX54Q8TDD1 881 aaKnown RBP12.52□□□□□ -0.4
SCN5A-204ENST00000414099 KIAA1107Q9UPP5 1409 aa12.52□□□□□ -0.4
SCN5A-204ENST00000414099 STK38Q15208 465 aa12.52□□□□□ -0.4
SCN5A-204ENST00000414099 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
SCN5A-204ENST00000414099 KRT32Q14532 448 aa12.52□□□□□ -0.41
SCN5A-204ENST00000414099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.52□□□□□ -0.41
SCN5A-204ENST00000414099 FAM177BA6PVY3 158 aa12.52□□□□□ -0.41
SCN5A-204ENST00000414099 NEBLO76041 1014 aa12.52□□□□□ -0.41
SCN5A-204ENST00000414099 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.41
SCN5A-204ENST00000414099 TROQ12816 1431 aaPredicted RBP12.52□□□□□ -0.41
SCN5A-204ENST00000414099 SERPINC1P01008 464 aa12.52□□□□□ -0.41
SCN5A-204ENST00000414099 BTBD11A6QL63 1104 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 ERBINQ96RT1 1412 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 PRKAR2BP31323 418 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 FOSBP53539 338 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 ZSCAN29Q8IWY8 852 aaPredicted RBP12.51□□□□□ -0.41
SCN5A-204ENST00000414099 AKAP2Q9Y2D5 859 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 CYP46A1Q9Y6A2 500 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms