RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 ARHGEF25Q86VW2 580 aa23.64■■□□□ 1.37
SF1-207ENST00000413951 TIMELESSQ9UNS1 1208 aa23.64■■□□□ 1.37
SF1-207ENST00000413951 CPSF1Q10570 1443 aaKnown RBP23.63■■□□□ 1.37
SF1-207ENST00000413951 OVOS2A0A0G2JMS6 1433 aa23.62■■□□□ 1.37
SF1-207ENST00000413951 OVOS2A0A0J9YW53 1432 aa23.62■■□□□ 1.37
SF1-207ENST00000413951 OVOS2Q6IE36 1432 aa23.62■■□□□ 1.37
SF1-207ENST00000413951 PARP4Q9UKK3 1724 aaKnown RBP23.62■■□□□ 1.37
SF1-207ENST00000413951 PIK3C2AO00443 1686 aa23.61■■□□□ 1.37
SF1-207ENST00000413951 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
SF1-207ENST00000413951 CSB-PGBD3P0DP91 1061 aa23.61■■□□□ 1.37
SF1-207ENST00000413951 HDGFL2Q7Z4V5 671 aaPredicted RBP23.59■■□□□ 1.37
SF1-207ENST00000413951 PUS7Q96PZ0 661 aaKnown RBP23.59■■□□□ 1.37
SF1-207ENST00000413951 CARD10Q9BWT7 1032 aa23.58■■□□□ 1.37
SF1-207ENST00000413951 AXIN2Q9Y2T1 843 aa23.58■■□□□ 1.37
SF1-207ENST00000413951 AKAP12Q02952 1782 aa23.57■■□□□ 1.36
SF1-207ENST00000413951 ABCC6O95255 1503 aa23.56■■□□□ 1.36
SF1-207ENST00000413951 SOX12O15370 315 aa23.56■■□□□ 1.36
SF1-207ENST00000413951 TMC1Q8TDI8 760 aa23.56■■□□□ 1.36
SF1-207ENST00000413951 TERF2IPQ9NYB0 399 aa23.56■■□□□ 1.36
SF1-207ENST00000413951 USP31Q70CQ4 1352 aa23.55■■□□□ 1.36
SF1-207ENST00000413951 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
SF1-207ENST00000413951 PLSCR1O15162 318 aa23.55■■□□□ 1.36
SF1-207ENST00000413951 BCL11BQ9C0K0 894 aaPredicted RBP23.54■■□□□ 1.36
SF1-207ENST00000413951 COL18A1P39060 1754 aa23.53■■□□□ 1.36
SF1-207ENST00000413951 BCL9O00512 1426 aa23.53■■□□□ 1.36
SF1-207ENST00000413951 EXOC5O00471 708 aa23.53■■□□□ 1.36
SF1-207ENST00000413951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.53■■□□□ 1.36
SF1-207ENST00000413951 LRRC37A3O60309 1634 aa23.5■■□□□ 1.35
SF1-207ENST00000413951 RREB1Q92766 1687 aa23.5■■□□□ 1.35
SF1-207ENST00000413951 NINLQ9Y2I6 1382 aa23.5■■□□□ 1.35
SF1-207ENST00000413951 NFAT5O94916 1531 aa23.49■■□□□ 1.35
SF1-207ENST00000413951 MON2Q7Z3U7 1717 aa23.49■■□□□ 1.35
SF1-207ENST00000413951 EDC4Q6P2E9 1401 aaKnown RBP23.49■■□□□ 1.35
SF1-207ENST00000413951 MARCH10Q8NA82 808 aaPredicted RBP23.47■■□□□ 1.35
SF1-207ENST00000413951 SLC12A5Q9H2X9 1139 aa23.47■■□□□ 1.35
SF1-207ENST00000413951 PEAK1Q9H792 1746 aa23.47■■□□□ 1.35
SF1-207ENST00000413951 NME9Q86XW9 330 aa23.46■■□□□ 1.35
SF1-207ENST00000413951 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
SF1-207ENST00000413951 ERBB3P21860 1342 aa23.45■■□□□ 1.34
SF1-207ENST00000413951 SPON1Q9HCB6 807 aa23.45■■□□□ 1.34
SF1-207ENST00000413951 RGPD3A6NKT7 1758 aaPredicted RBP23.45■■□□□ 1.34
SF1-207ENST00000413951 RGPD4Q7Z3J3 1758 aa23.45■■□□□ 1.34
SF1-207ENST00000413951 CD163L1Q9NR16 1453 aa23.44■■□□□ 1.34
SF1-207ENST00000413951 NLRP2Q9NX02 1062 aa23.44■■□□□ 1.34
SF1-207ENST00000413951 USP54Q70EL1 1684 aa23.43■■□□□ 1.34
SF1-207ENST00000413951 PPP1R1BQ9UD71 204 aaPredicted RBP23.42■■□□□ 1.34
SF1-207ENST00000413951 WNK3Q9BYP7 1800 aa23.42■■□□□ 1.34
SF1-207ENST00000413951 A0A1W2PP64 1363 aa23.41■■□□□ 1.34
SF1-207ENST00000413951 KCNQ2O43526 872 aa23.41■■□□□ 1.34
SF1-207ENST00000413951 IL2RBP14784 551 aa23.41■■□□□ 1.34
SF1-207ENST00000413951 TNS2Q63HR2 1409 aa23.41■■□□□ 1.34
SF1-207ENST00000413951 ANKRD24Q8TF21 1146 aa23.4■■□□□ 1.34
SF1-207ENST00000413951 ST20-MTHFSA0A0A6YYL1 179 aa23.39■■□□□ 1.33
SF1-207ENST00000413951 DCAF8L1A6NGE4 600 aa23.39■■□□□ 1.33
SF1-207ENST00000413951 SBF2Q86WG5 1849 aa23.38■■□□□ 1.33
SF1-207ENST00000413951 RGPD5Q99666 1765 aa23.38■■□□□ 1.33
SF1-207ENST00000413951 COG3Q96JB2 828 aa23.38■■□□□ 1.33
SF1-207ENST00000413951 TESK2Q96S53 571 aa23.38■■□□□ 1.33
SF1-207ENST00000413951 IP6K1Q92551 441 aa23.36■■□□□ 1.33
SF1-207ENST00000413951 STK32BQ9NY57 414 aa23.36■■□□□ 1.33
SF1-207ENST00000413951 TMF1P82094 1093 aa23.35■■□□□ 1.33
SF1-207ENST00000413951 TXNRD1Q16881 649 aa23.35■■□□□ 1.33
SF1-207ENST00000413951 CDCA8Q53HL2 280 aa23.34■■□□□ 1.33
SF1-207ENST00000413951 PTF1AQ7RTS3 328 aa23.33■■□□□ 1.33
SF1-207ENST00000413951 PROM2Q8N271 834 aa23.33■■□□□ 1.33
SF1-207ENST00000413951 LTN1O94822 1766 aa23.32■■□□□ 1.32
SF1-207ENST00000413951 ANKRD36BQ8N2N9 1353 aa23.31■■□□□ 1.32
SF1-207ENST00000413951 AMPHP49418 695 aa23.3■■□□□ 1.32
SF1-207ENST00000413951 ANO8Q9HCE9 1232 aaPredicted RBP23.3■■□□□ 1.32
SF1-207ENST00000413951 SLC15A2Q16348 729 aa23.29■■□□□ 1.32
SF1-207ENST00000413951 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
SF1-207ENST00000413951 NHSQ6T4R5 1651 aa23.26■■□□□ 1.31
SF1-207ENST00000413951 FAM208AQ9UK61 1670 aaKnown RBP23.26■■□□□ 1.31
SF1-207ENST00000413951 LTV1Q96GA3 475 aaPredicted RBP23.26■■□□□ 1.31
SF1-207ENST00000413951 MAP3K19Q56UN5 1328 aa23.26■■□□□ 1.31
SF1-207ENST00000413951 USP47Q96K76 1375 aa23.26■■□□□ 1.31
SF1-207ENST00000413951 HOXC9P31274 260 aa23.25■■□□□ 1.31
SF1-207ENST00000413951 RTL1A6NKG5 1358 aa23.25■■□□□ 1.31
SF1-207ENST00000413951 DDX54Q8TDD1 881 aaKnown RBP23.23■■□□□ 1.31
SF1-207ENST00000413951 ZBTB7AO95365 584 aa23.22■■□□□ 1.31
SF1-207ENST00000413951 MTFR1LQ9H019 292 aa23.22■■□□□ 1.31
SF1-207ENST00000413951 CGNL1Q0VF96 1302 aa23.22■■□□□ 1.31
SF1-207ENST00000413951 SMG6Q86US8 1419 aaKnown RBP23.22■■□□□ 1.31
SF1-207ENST00000413951 SLC27A3Q5K4L6 730 aa23.21■■□□□ 1.31
SF1-207ENST00000413951 CASZ1Q86V15 1759 aa23.2■■□□□ 1.3
SF1-207ENST00000413951 FYB1O15117 783 aa23.2■■□□□ 1.3
SF1-207ENST00000413951 HMGB2P26583 209 aaKnown RBP23.2■■□□□ 1.3
SF1-207ENST00000413951 ZCRB1Q8TBF4 217 aaKnown RBP23.19■■□□□ 1.3
SF1-207ENST00000413951 KIF24Q5T7B8 1368 aa23.18■■□□□ 1.3
SF1-207ENST00000413951 YY1P25490 414 aa23.18■■□□□ 1.3
SF1-207ENST00000413951 GGNBP2Q9H3C7 697 aa23.17■■□□□ 1.3
SF1-207ENST00000413951 ATF5Q9Y2D1 282 aaPredicted RBP23.17■■□□□ 1.3
SF1-207ENST00000413951 PTGER2P43116 358 aa23.16■■□□□ 1.3
SF1-207ENST00000413951 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
SF1-207ENST00000413951 PDGFDQ9GZP0 370 aaPredicted RBP23.16■■□□□ 1.3
SF1-207ENST00000413951 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
SF1-207ENST00000413951 RRS1Q15050 365 aaKnown RBP23.14■■□□□ 1.29
SF1-207ENST00000413951 SLC16A10Q8TF71 515 aa23.13■■□□□ 1.29
SF1-207ENST00000413951 BTAF1O14981 1849 aa23.12■■□□□ 1.29
SF1-207ENST00000413951 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms