RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 DDB1Q16531 1140 aa13.95□□□□□ -0.18
RFFL-203ENST00000413582 BCL11BQ9C0K0 894 aaPredicted RBP13.95□□□□□ -0.18
RFFL-203ENST00000413582 RGPD5Q99666 1765 aa13.94□□□□□ -0.18
RFFL-203ENST00000413582 ZBTB7CA1YPR0 619 aa13.94□□□□□ -0.18
RFFL-203ENST00000413582 SRPK2P78362 688 aaKnown RBP13.94□□□□□ -0.18
RFFL-203ENST00000413582 CPSF1Q10570 1443 aaKnown RBP13.94□□□□□ -0.18
RFFL-203ENST00000413582 UTRNP46939 3433 aa13.93□□□□□ -0.18
RFFL-203ENST00000413582 ZBTB7AO95365 584 aa13.93□□□□□ -0.18
RFFL-203ENST00000413582 PTGER2P43116 358 aa13.93□□□□□ -0.18
RFFL-203ENST00000413582 TOM1L2Q6ZVM7 507 aa13.93□□□□□ -0.18
RFFL-203ENST00000413582 PROM2Q8N271 834 aa13.93□□□□□ -0.18
RFFL-203ENST00000413582 MARCH10Q8NA82 808 aaPredicted RBP13.93□□□□□ -0.18
RFFL-203ENST00000413582 CABP2Q9NPB3 220 aa13.93□□□□□ -0.18
RFFL-203ENST00000413582 CHD4Q14839 1912 aa13.93□□□□□ -0.18
RFFL-203ENST00000413582 WDR17Q8IZU2 1322 aa13.92□□□□□ -0.18
RFFL-203ENST00000413582 CENPJQ9HC77 1338 aaPredicted RBP13.92□□□□□ -0.18
RFFL-203ENST00000413582 NLRP6P59044 892 aa13.92□□□□□ -0.18
RFFL-203ENST00000413582 NBPF1Q3BBV0 1214 aa13.92□□□□□ -0.18
RFFL-203ENST00000413582 TRPM1Q7Z4N2 1603 aa13.91□□□□□ -0.18
RFFL-203ENST00000413582 AXIN2Q9Y2T1 843 aa13.91□□□□□ -0.18
RFFL-203ENST00000413582 NHSQ6T4R5 1651 aa13.91□□□□□ -0.18
RFFL-203ENST00000413582 PAPPAQ13219 1627 aa13.9□□□□□ -0.18
RFFL-203ENST00000413582 ZNF784Q8NCA9 323 aaPredicted RBP13.9□□□□□ -0.18
RFFL-203ENST00000413582 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
RFFL-203ENST00000413582 NFAT5O94916 1531 aa13.9□□□□□ -0.19
RFFL-203ENST00000413582 TNS2Q63HR2 1409 aa13.9□□□□□ -0.19
RFFL-203ENST00000413582 CABP1Q9NZU7 370 aa13.89□□□□□ -0.19
RFFL-203ENST00000413582 ABCC6O95255 1503 aa13.89□□□□□ -0.19
RFFL-203ENST00000413582 TXNRD1Q16881 649 aa13.88□□□□□ -0.19
RFFL-203ENST00000413582 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
RFFL-203ENST00000413582 FHDC1Q9C0D6 1143 aaPredicted RBP13.88□□□□□ -0.19
RFFL-203ENST00000413582 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
RFFL-203ENST00000413582 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
RFFL-203ENST00000413582 SLC15A2Q16348 729 aa13.87□□□□□ -0.19
RFFL-203ENST00000413582 ARHGEF25Q86VW2 580 aa13.87□□□□□ -0.19
RFFL-203ENST00000413582 SYT17Q9BSW7 474 aa13.87□□□□□ -0.19
RFFL-203ENST00000413582 CARD10Q9BWT7 1032 aa13.87□□□□□ -0.19
RFFL-203ENST00000413582 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
RFFL-203ENST00000413582 BTAF1O14981 1849 aa13.85□□□□□ -0.19
RFFL-203ENST00000413582 CCDC7Q96M83 1385 aa13.85□□□□□ -0.19
RFFL-203ENST00000413582 MAP3K5Q99683 1374 aa13.84□□□□□ -0.19
RFFL-203ENST00000413582 KCNH5Q8NCM2 988 aa13.84□□□□□ -0.19
RFFL-203ENST00000413582 USP54Q70EL1 1684 aa13.84□□□□□ -0.19
RFFL-203ENST00000413582 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
RFFL-203ENST00000413582 MON2Q7Z3U7 1717 aa13.84□□□□□ -0.19
RFFL-203ENST00000413582 SOX12O15370 315 aa13.83□□□□□ -0.2
RFFL-203ENST00000413582 CSB-PGBD3P0DP91 1061 aa13.83□□□□□ -0.2
RFFL-203ENST00000413582 EXOC5O00471 708 aa13.82□□□□□ -0.2
RFFL-203ENST00000413582 EVC2Q86UK5 1308 aa13.82□□□□□ -0.2
RFFL-203ENST00000413582 TTC21AQ8NDW8 1320 aa13.82□□□□□ -0.2
RFFL-203ENST00000413582 QSER1Q2KHR3 1735 aa13.81□□□□□ -0.2
RFFL-203ENST00000413582 KAT6BQ8WYB5 2073 aa13.81□□□□□ -0.2
RFFL-203ENST00000413582 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
RFFL-203ENST00000413582 LTN1O94822 1766 aa13.81□□□□□ -0.2
RFFL-203ENST00000413582 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
RFFL-203ENST00000413582 ARXQ96QS3 562 aa13.8□□□□□ -0.2
RFFL-203ENST00000413582 ERBB3P21860 1342 aa13.8□□□□□ -0.2
RFFL-203ENST00000413582 TUBGCP6Q96RT7 1819 aa13.79□□□□□ -0.2
RFFL-203ENST00000413582 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
RFFL-203ENST00000413582 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
RFFL-203ENST00000413582 ACSBG1Q96GR2 724 aa13.79□□□□□ -0.2
RFFL-203ENST00000413582 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
RFFL-203ENST00000413582 USP31Q70CQ4 1352 aa13.77□□□□□ -0.21
RFFL-203ENST00000413582 KTN1Q86UP2 1357 aaKnown RBP13.77□□□□□ -0.21
RFFL-203ENST00000413582 GOLGB1Q14789 3259 aaKnown RBP13.76□□□□□ -0.21
RFFL-203ENST00000413582 KCNA4P22459 653 aa13.76□□□□□ -0.21
RFFL-203ENST00000413582 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
RFFL-203ENST00000413582 SHANK3Q9BYB0 1731 aa13.76□□□□□ -0.21
RFFL-203ENST00000413582 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
RFFL-203ENST00000413582 IL2RBP14784 551 aa13.75□□□□□ -0.21
RFFL-203ENST00000413582 NLRP2Q9NX02 1062 aa13.75□□□□□ -0.21
RFFL-203ENST00000413582 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
RFFL-203ENST00000413582 FAM208AQ9UK61 1670 aaKnown RBP13.74□□□□□ -0.21
RFFL-203ENST00000413582 ROCK2O75116 1388 aaKnown RBP13.73□□□□□ -0.21
RFFL-203ENST00000413582 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
RFFL-203ENST00000413582 L3MBTL2Q969R5 705 aa13.73□□□□□ -0.21
RFFL-203ENST00000413582 LY75O60449 1722 aa13.73□□□□□ -0.21
RFFL-203ENST00000413582 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
RFFL-203ENST00000413582 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
RFFL-203ENST00000413582 CEP350Q5VT06 3117 aa13.72□□□□□ -0.21
RFFL-203ENST00000413582 GPR162Q16538 588 aa13.72□□□□□ -0.21
RFFL-203ENST00000413582 NME9Q86XW9 330 aa13.71□□□□□ -0.21
RFFL-203ENST00000413582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.71□□□□□ -0.21
RFFL-203ENST00000413582 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
RFFL-203ENST00000413582 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
RFFL-203ENST00000413582 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
RFFL-203ENST00000413582 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
RFFL-203ENST00000413582 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
RFFL-203ENST00000413582 POLD1P28340 1107 aa13.69□□□□□ -0.22
RFFL-203ENST00000413582 NLGN2Q8NFZ4 835 aa13.69□□□□□ -0.22
RFFL-203ENST00000413582 EDC4Q6P2E9 1401 aaKnown RBP13.69□□□□□ -0.22
RFFL-203ENST00000413582 NSD2O96028 1365 aa13.69□□□□□ -0.22
RFFL-203ENST00000413582 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
RFFL-203ENST00000413582 ANKRD36BQ8N2N9 1353 aa13.67□□□□□ -0.22
RFFL-203ENST00000413582 RGPD2P0DJD1 1756 aa13.66□□□□□ -0.22
RFFL-203ENST00000413582 KCNQ4P56696 695 aa13.66□□□□□ -0.22
RFFL-203ENST00000413582 TFCP2L1Q9NZI6 479 aa13.66□□□□□ -0.22
RFFL-203ENST00000413582 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
RFFL-203ENST00000413582 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
RFFL-203ENST00000413582 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms