RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 XRCC6P12956 609 aaKnown RBP eCLIP17.86■□□□□ 0.45
ATRIP-204ENST00000412052 PNNQ9H307 717 aaKnown RBP17.86■□□□□ 0.45
ATRIP-204ENST00000412052 RRAGDQ9NQL2 400 aaPredicted RBP17.86■□□□□ 0.45
ATRIP-204ENST00000412052 CDC42BPGQ6DT37 1551 aa17.86■□□□□ 0.45
ATRIP-204ENST00000412052 KIF2CQ99661 725 aa17.85■□□□□ 0.45
ATRIP-204ENST00000412052 TRAK2O60296 914 aa17.85■□□□□ 0.45
ATRIP-204ENST00000412052 TWISTNBQ3B726 338 aaPredicted RBP17.85■□□□□ 0.45
ATRIP-204ENST00000412052 RBM25P49756 843 aaKnown RBP17.84■□□□□ 0.45
ATRIP-204ENST00000412052 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
ATRIP-204ENST00000412052 TBC1D9Q6ZT07 1266 aa17.84■□□□□ 0.45
ATRIP-204ENST00000412052 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
ATRIP-204ENST00000412052 METP08581 1390 aa17.83■□□□□ 0.44
ATRIP-204ENST00000412052 BMP2KLQ5H9B9 411 aa17.83■□□□□ 0.44
ATRIP-204ENST00000412052 CPS1P31327 1500 aa17.83■□□□□ 0.44
ATRIP-204ENST00000412052 ZNF853P0CG23 659 aa17.82■□□□□ 0.44
ATRIP-204ENST00000412052 PTCH1Q13635 1447 aa17.82■□□□□ 0.44
ATRIP-204ENST00000412052 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
ATRIP-204ENST00000412052 NUTM2FA1L443 756 aa17.82■□□□□ 0.44
ATRIP-204ENST00000412052 FAM43AQ8N2R8 423 aa17.82■□□□□ 0.44
ATRIP-204ENST00000412052 IFT57Q9NWB7 429 aa17.82■□□□□ 0.44
ATRIP-204ENST00000412052 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
ATRIP-204ENST00000412052 ABCC4O15439 1325 aa17.82■□□□□ 0.44
ATRIP-204ENST00000412052 DLG5Q8TDM6 1919 aa17.81■□□□□ 0.44
ATRIP-204ENST00000412052 GOLGA6L3A6NEY3 463 aa17.81■□□□□ 0.44
ATRIP-204ENST00000412052 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
ATRIP-204ENST00000412052 DDIT3P35638 169 aa17.81■□□□□ 0.44
ATRIP-204ENST00000412052 GNAI1P63096 354 aa17.81■□□□□ 0.44
ATRIP-204ENST00000412052 ATP7BP35670 1465 aa17.81■□□□□ 0.44
ATRIP-204ENST00000412052 FSD2A1L4K1 749 aa17.8■□□□□ 0.44
ATRIP-204ENST00000412052 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
ATRIP-204ENST00000412052 C16orf71Q8IYS4 520 aaPredicted RBP17.8■□□□□ 0.44
ATRIP-204ENST00000412052 RIMBP3CA6NJZ7 1639 aa17.8■□□□□ 0.44
ATRIP-204ENST00000412052 RIMBP3BA6NNM3 1639 aa17.8■□□□□ 0.44
ATRIP-204ENST00000412052 RIMBP3Q9UFD9 1639 aa17.8■□□□□ 0.44
ATRIP-204ENST00000412052 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
ATRIP-204ENST00000412052 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
ATRIP-204ENST00000412052 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
ATRIP-204ENST00000412052 GSPT1P15170 499 aaKnown RBP17.79■□□□□ 0.44
ATRIP-204ENST00000412052 FAM69CQ0P6D2 419 aa17.79■□□□□ 0.44
ATRIP-204ENST00000412052 L1TD1Q5T7N2 865 aaKnown RBP17.79■□□□□ 0.44
ATRIP-204ENST00000412052 NUDT16Q96DE0 195 aaKnown RBP17.79■□□□□ 0.44
ATRIP-204ENST00000412052 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
ATRIP-204ENST00000412052 CPSF1Q10570 1443 aaKnown RBP17.79■□□□□ 0.44
ATRIP-204ENST00000412052 APBB1O00213 710 aa17.79■□□□□ 0.44
ATRIP-204ENST00000412052 SOX12O15370 315 aa17.79■□□□□ 0.44
ATRIP-204ENST00000412052 OTUD7AQ8TE49 926 aaPredicted RBP17.79■□□□□ 0.44
ATRIP-204ENST00000412052 KNDC1Q76NI1 1749 aa17.79■□□□□ 0.44
ATRIP-204ENST00000412052 EIF5BO60841 1220 aaKnown RBP17.78■□□□□ 0.44
ATRIP-204ENST00000412052 GCC1Q96CN9 775 aa17.78■□□□□ 0.44
ATRIP-204ENST00000412052 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
ATRIP-204ENST00000412052 SETD1AO15047 1707 aaKnown RBP17.78■□□□□ 0.44
ATRIP-204ENST00000412052 TSPOAP1O95153 1857 aa17.78■□□□□ 0.44
ATRIP-204ENST00000412052 EDC4Q6P2E9 1401 aaKnown RBP17.78■□□□□ 0.44
ATRIP-204ENST00000412052 COG3Q96JB2 828 aa17.78■□□□□ 0.44
ATRIP-204ENST00000412052 MCM10Q7L590 875 aa17.77■□□□□ 0.43
ATRIP-204ENST00000412052 ARHGAP45Q92619 1136 aa17.77■□□□□ 0.43
ATRIP-204ENST00000412052 SNX21Q969T3 373 aa17.77■□□□□ 0.43
ATRIP-204ENST00000412052 PRR36Q9H6K5 1346 aa17.76■□□□□ 0.43
ATRIP-204ENST00000412052 ZNF428Q96B54 188 aa17.76■□□□□ 0.43
ATRIP-204ENST00000412052 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
ATRIP-204ENST00000412052 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
ATRIP-204ENST00000412052 HSP90AA1P07900 732 aaKnown RBP17.75■□□□□ 0.43
ATRIP-204ENST00000412052 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
ATRIP-204ENST00000412052 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
ATRIP-204ENST00000412052 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
ATRIP-204ENST00000412052 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
ATRIP-204ENST00000412052 NRXN3Q9Y4C0 1643 aa17.74■□□□□ 0.43
ATRIP-204ENST00000412052 PLEKHM2Q8IWE5 1019 aa17.74■□□□□ 0.43
ATRIP-204ENST00000412052 MIS18AQ9NYP9 233 aa17.74■□□□□ 0.43
ATRIP-204ENST00000412052 AK9Q5TCS8 1911 aa17.73■□□□□ 0.43
ATRIP-204ENST00000412052 EIF4A2Q14240 407 aaKnown RBP17.73■□□□□ 0.43
ATRIP-204ENST00000412052 GAS2L3Q86XJ1 694 aa17.73■□□□□ 0.43
ATRIP-204ENST00000412052 SSFA2P28290 1259 aa17.72■□□□□ 0.43
ATRIP-204ENST00000412052 CCDC61Q9Y6R9 512 aa17.72■□□□□ 0.43
ATRIP-204ENST00000412052 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
ATRIP-204ENST00000412052 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
ATRIP-204ENST00000412052 DDX11L8A8MPP1 907 aa17.71■□□□□ 0.43
ATRIP-204ENST00000412052 K7ELQ4 463 aaPredicted RBP17.71■□□□□ 0.43
ATRIP-204ENST00000412052 CDC45O75419 566 aa17.71■□□□□ 0.42
ATRIP-204ENST00000412052 AATKQ6ZMQ8 1374 aa17.7■□□□□ 0.42
ATRIP-204ENST00000412052 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
ATRIP-204ENST00000412052 RGS12O14924 1447 aa17.7■□□□□ 0.42
ATRIP-204ENST00000412052 MSH6P52701 1360 aa17.7■□□□□ 0.42
ATRIP-204ENST00000412052 MEIS3Q99687 375 aa17.7■□□□□ 0.42
ATRIP-204ENST00000412052 FOXO3O43524 673 aa17.69■□□□□ 0.42
ATRIP-204ENST00000412052 GRPEL1Q9HAV7 217 aa17.69■□□□□ 0.42
ATRIP-204ENST00000412052 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
ATRIP-204ENST00000412052 LMOD3Q0VAK6 560 aa17.69■□□□□ 0.42
ATRIP-204ENST00000412052 DCTPP1Q9H773 170 aa17.69■□□□□ 0.42
ATRIP-204ENST00000412052 SPATA31D1Q6ZQQ2 1576 aa17.68■□□□□ 0.42
ATRIP-204ENST00000412052 TTC22Q5TAA0 569 aa17.67■□□□□ 0.42
ATRIP-204ENST00000412052 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
ATRIP-204ENST00000412052 CHMP4BQ9H444 224 aaKnown RBP17.67■□□□□ 0.42
ATRIP-204ENST00000412052 ROBO2Q9HCK4 1378 aa17.67■□□□□ 0.42
ATRIP-204ENST00000412052 F6X3S4 739 aa17.66■□□□□ 0.42
ATRIP-204ENST00000412052 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
ATRIP-204ENST00000412052 PKP1Q13835 747 aa17.66■□□□□ 0.42
ATRIP-204ENST00000412052 INTS3Q68E01 1043 aaKnown RBP17.65■□□□□ 0.42
ATRIP-204ENST00000412052 G2E3Q7L622 706 aa17.65■□□□□ 0.42
ATRIP-204ENST00000412052 C3P01024 1663 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms