RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 PLSCR1O15162 318 aa13.04□□□□□ -0.32
MRPL48-204ENST00000411840 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
MRPL48-204ENST00000411840 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
MRPL48-204ENST00000411840 WDR17Q8IZU2 1322 aa13.04□□□□□ -0.32
MRPL48-204ENST00000411840 SOX12O15370 315 aa13.03□□□□□ -0.32
MRPL48-204ENST00000411840 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
MRPL48-204ENST00000411840 OVOS2A0A0G2JMS6 1433 aa13.03□□□□□ -0.32
MRPL48-204ENST00000411840 OVOS2A0A0J9YW53 1432 aa13.03□□□□□ -0.32
MRPL48-204ENST00000411840 OVOS2Q6IE36 1432 aa13.03□□□□□ -0.32
MRPL48-204ENST00000411840 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.32
MRPL48-204ENST00000411840 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
MRPL48-204ENST00000411840 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.33
MRPL48-204ENST00000411840 CDCA7Q9BWT1 371 aaPredicted RBP13.02□□□□□ -0.33
MRPL48-204ENST00000411840 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.33
MRPL48-204ENST00000411840 SPON1Q9HCB6 807 aa13.02□□□□□ -0.33
MRPL48-204ENST00000411840 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.33
MRPL48-204ENST00000411840 KCNQ2O43526 872 aa13.01□□□□□ -0.33
MRPL48-204ENST00000411840 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
MRPL48-204ENST00000411840 CARD10Q9BWT7 1032 aa13.01□□□□□ -0.33
MRPL48-204ENST00000411840 TTC21AQ8NDW8 1320 aa13.01□□□□□ -0.33
MRPL48-204ENST00000411840 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
MRPL48-204ENST00000411840 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
MRPL48-204ENST00000411840 KTN1Q86UP2 1357 aaKnown RBP13□□□□□ -0.33
MRPL48-204ENST00000411840 PPP1R1BQ9UD71 204 aaPredicted RBP13□□□□□ -0.33
MRPL48-204ENST00000411840 RREB1Q92766 1687 aa12.99□□□□□ -0.33
MRPL48-204ENST00000411840 EXOC5O00471 708 aa12.99□□□□□ -0.33
MRPL48-204ENST00000411840 PROM2Q8N271 834 aa12.99□□□□□ -0.33
MRPL48-204ENST00000411840 PIK3C2AO00443 1686 aa12.99□□□□□ -0.33
MRPL48-204ENST00000411840 TRPM1Q7Z4N2 1603 aa12.98□□□□□ -0.33
MRPL48-204ENST00000411840 NUP188Q5SRE5 1749 aa12.97□□□□□ -0.33
MRPL48-204ENST00000411840 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
MRPL48-204ENST00000411840 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.97□□□□□ -0.33
MRPL48-204ENST00000411840 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
MRPL48-204ENST00000411840 COL18A1P39060 1754 aa12.97□□□□□ -0.33
MRPL48-204ENST00000411840 BCL9O00512 1426 aa12.96□□□□□ -0.33
MRPL48-204ENST00000411840 LRRC37A3O60309 1634 aa12.96□□□□□ -0.33
MRPL48-204ENST00000411840 PDGFDQ9GZP0 370 aaPredicted RBP12.96□□□□□ -0.33
MRPL48-204ENST00000411840 TXNRD1Q16881 649 aa12.95□□□□□ -0.34
MRPL48-204ENST00000411840 TMC1Q8TDI8 760 aa12.95□□□□□ -0.34
MRPL48-204ENST00000411840 CARD11Q9BXL7 1154 aa12.95□□□□□ -0.34
MRPL48-204ENST00000411840 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
MRPL48-204ENST00000411840 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
MRPL48-204ENST00000411840 NFAT5O94916 1531 aa12.94□□□□□ -0.34
MRPL48-204ENST00000411840 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
MRPL48-204ENST00000411840 YY1P25490 414 aa12.94□□□□□ -0.34
MRPL48-204ENST00000411840 NME9Q86XW9 330 aa12.94□□□□□ -0.34
MRPL48-204ENST00000411840 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
MRPL48-204ENST00000411840 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
MRPL48-204ENST00000411840 HDGFL2Q7Z4V5 671 aaPredicted RBP12.93□□□□□ -0.34
MRPL48-204ENST00000411840 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
MRPL48-204ENST00000411840 STK32BQ9NY57 414 aa12.93□□□□□ -0.34
MRPL48-204ENST00000411840 SBNO2Q9Y2G9 1366 aa12.93□□□□□ -0.34
MRPL48-204ENST00000411840 SLC15A2Q16348 729 aa12.92□□□□□ -0.34
MRPL48-204ENST00000411840 NINLQ9Y2I6 1382 aa12.92□□□□□ -0.34
MRPL48-204ENST00000411840 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
MRPL48-204ENST00000411840 ERBB3P21860 1342 aa12.91□□□□□ -0.34
MRPL48-204ENST00000411840 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
MRPL48-204ENST00000411840 ACSBG1Q96GR2 724 aa12.91□□□□□ -0.34
MRPL48-204ENST00000411840 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
MRPL48-204ENST00000411840 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
MRPL48-204ENST00000411840 IL2RBP14784 551 aa12.9□□□□□ -0.34
MRPL48-204ENST00000411840 PTGER2P43116 358 aa12.9□□□□□ -0.34
MRPL48-204ENST00000411840 RGPD3A6NKT7 1758 aaPredicted RBP12.89□□□□□ -0.35
MRPL48-204ENST00000411840 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
MRPL48-204ENST00000411840 RGPD4Q7Z3J3 1758 aa12.89□□□□□ -0.35
MRPL48-204ENST00000411840 TNS2Q63HR2 1409 aa12.89□□□□□ -0.35
MRPL48-204ENST00000411840 ABCC6O95255 1503 aa12.89□□□□□ -0.35
MRPL48-204ENST00000411840 PUS7Q96PZ0 661 aaKnown RBP12.89□□□□□ -0.35
MRPL48-204ENST00000411840 EDC4Q6P2E9 1401 aaKnown RBP12.88□□□□□ -0.35
MRPL48-204ENST00000411840 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
MRPL48-204ENST00000411840 SBF2Q86WG5 1849 aa12.86□□□□□ -0.35
MRPL48-204ENST00000411840 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
MRPL48-204ENST00000411840 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
MRPL48-204ENST00000411840 IP6K1Q92551 441 aa12.86□□□□□ -0.35
MRPL48-204ENST00000411840 WNK3Q9BYP7 1800 aa12.85□□□□□ -0.35
MRPL48-204ENST00000411840 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
MRPL48-204ENST00000411840 RGPD5Q99666 1765 aa12.85□□□□□ -0.35
MRPL48-204ENST00000411840 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
MRPL48-204ENST00000411840 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
MRPL48-204ENST00000411840 SYT17Q9BSW7 474 aa12.85□□□□□ -0.35
MRPL48-204ENST00000411840 MON2Q7Z3U7 1717 aa12.85□□□□□ -0.35
MRPL48-204ENST00000411840 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
MRPL48-204ENST00000411840 TESK2Q96S53 571 aa12.84□□□□□ -0.35
MRPL48-204ENST00000411840 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
MRPL48-204ENST00000411840 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
MRPL48-204ENST00000411840 LRRC4BQ9NT99 713 aa12.84□□□□□ -0.35
MRPL48-204ENST00000411840 COG3Q96JB2 828 aa12.83□□□□□ -0.36
MRPL48-204ENST00000411840 ARXQ96QS3 562 aa12.83□□□□□ -0.36
MRPL48-204ENST00000411840 UTRNP46939 3433 aa12.83□□□□□ -0.36
MRPL48-204ENST00000411840 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
MRPL48-204ENST00000411840 FBLN1P23142 703 aa12.82□□□□□ -0.36
MRPL48-204ENST00000411840 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
MRPL48-204ENST00000411840 USP54Q70EL1 1684 aa12.82□□□□□ -0.36
MRPL48-204ENST00000411840 NHSQ6T4R5 1651 aa12.81□□□□□ -0.36
MRPL48-204ENST00000411840 HOXC9P31274 260 aa12.81□□□□□ -0.36
MRPL48-204ENST00000411840 AMPHP49418 695 aa12.81□□□□□ -0.36
MRPL48-204ENST00000411840 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
MRPL48-204ENST00000411840 MAP3K19Q56UN5 1328 aa12.81□□□□□ -0.36
MRPL48-204ENST00000411840 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
MRPL48-204ENST00000411840 SLC27A3Q5K4L6 730 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms