RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 NUTM2AQ8IVF1 878 aaPredicted RBP22.41■■□□□ 1.18
GCFC2-202ENST00000409857 LMO7Q8WWI1 1683 aa22.4■■□□□ 1.18
GCFC2-202ENST00000409857 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
GCFC2-202ENST00000409857 KIAA0232Q92628 1395 aa22.4■■□□□ 1.18
GCFC2-202ENST00000409857 PLEKHG5O94827 1062 aa22.4■■□□□ 1.18
GCFC2-202ENST00000409857 ARHGEF25Q86VW2 580 aa22.4■■□□□ 1.18
GCFC2-202ENST00000409857 NWD2Q9ULI1 1742 aa22.4■■□□□ 1.18
GCFC2-202ENST00000409857 PLCH1Q4KWH8 1693 aa22.4■■□□□ 1.18
GCFC2-202ENST00000409857 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
GCFC2-202ENST00000409857 RALBP1Q15311 655 aa22.38■■□□□ 1.17
GCFC2-202ENST00000409857 RTL1A6NKG5 1358 aa22.38■■□□□ 1.17
GCFC2-202ENST00000409857 ZC3H6P61129 1189 aaKnown RBP22.37■■□□□ 1.17
GCFC2-202ENST00000409857 PEAK1Q9H792 1746 aa22.37■■□□□ 1.17
GCFC2-202ENST00000409857 SOX12O15370 315 aa22.37■■□□□ 1.17
GCFC2-202ENST00000409857 ADAMTS2O95450 1211 aa22.36■■□□□ 1.17
GCFC2-202ENST00000409857 PRDM11Q9NQV5 511 aa22.36■■□□□ 1.17
GCFC2-202ENST00000409857 MAP3K19Q56UN5 1328 aa22.36■■□□□ 1.17
GCFC2-202ENST00000409857 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
GCFC2-202ENST00000409857 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
GCFC2-202ENST00000409857 POLKQ9UBT6 870 aa22.34■■□□□ 1.17
GCFC2-202ENST00000409857 NRAPQ86VF7 1730 aa22.34■■□□□ 1.17
GCFC2-202ENST00000409857 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.34■■□□□ 1.17
GCFC2-202ENST00000409857 SLIT2O94813 1529 aa22.34■■□□□ 1.17
GCFC2-202ENST00000409857 FBLN1P23142 703 aa22.33■■□□□ 1.17
GCFC2-202ENST00000409857 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.17
GCFC2-202ENST00000409857 BLMP54132 1417 aaPredicted RBP22.33■■□□□ 1.17
GCFC2-202ENST00000409857 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
GCFC2-202ENST00000409857 MEX3CQ5U5Q3 659 aaKnown RBP22.33■■□□□ 1.17
GCFC2-202ENST00000409857 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.16
GCFC2-202ENST00000409857 FLT4P35916 1363 aa22.32■■□□□ 1.16
GCFC2-202ENST00000409857 IP6K1Q92551 441 aa22.31■■□□□ 1.16
GCFC2-202ENST00000409857 CAMTA1Q9Y6Y1 1673 aa22.31■■□□□ 1.16
GCFC2-202ENST00000409857 PPP2R1AP30153 589 aa22.3■■□□□ 1.16
GCFC2-202ENST00000409857 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
GCFC2-202ENST00000409857 NUDCQ9Y266 331 aa22.3■■□□□ 1.16
GCFC2-202ENST00000409857 EMILIN1Q9Y6C2 1016 aa22.3■■□□□ 1.16
GCFC2-202ENST00000409857 FAM208AQ9UK61 1670 aaKnown RBP22.3■■□□□ 1.16
GCFC2-202ENST00000409857 AMPHP49418 695 aa22.3■■□□□ 1.16
GCFC2-202ENST00000409857 HOXC9P31274 260 aa22.29■■□□□ 1.16
GCFC2-202ENST00000409857 CHRNA2Q15822 529 aa22.29■■□□□ 1.16
GCFC2-202ENST00000409857 C8orf37Q96NL8 207 aa22.29■■□□□ 1.16
GCFC2-202ENST00000409857 MYBBP1AQ9BQG0 1328 aaKnown RBP22.29■■□□□ 1.16
GCFC2-202ENST00000409857 NGLY1Q96IV0 654 aa22.28■■□□□ 1.16
GCFC2-202ENST00000409857 INSRP06213 1382 aa22.28■■□□□ 1.16
GCFC2-202ENST00000409857 COL5A2P05997 1499 aaPredicted RBP22.27■■□□□ 1.16
GCFC2-202ENST00000409857 ZBTB7CA1YPR0 619 aa22.27■■□□□ 1.16
GCFC2-202ENST00000409857 MTHFSP49914 203 aa22.27■■□□□ 1.16
GCFC2-202ENST00000409857 AXIN2Q9Y2T1 843 aa22.26■■□□□ 1.15
GCFC2-202ENST00000409857 BCL9LQ86UU0 1499 aa22.26■■□□□ 1.15
GCFC2-202ENST00000409857 BTG4Q9NY30 223 aa22.26■■□□□ 1.15
GCFC2-202ENST00000409857 PNISRQ8TF01 805 aaKnown RBP22.24■■□□□ 1.15
GCFC2-202ENST00000409857 AFF2P51816 1311 aa22.23■■□□□ 1.15
GCFC2-202ENST00000409857 PPM1GO15355 546 aaPredicted RBP22.23■■□□□ 1.15
GCFC2-202ENST00000409857 COL3A1P02461 1466 aaPredicted RBP22.23■■□□□ 1.15
GCFC2-202ENST00000409857 RNF123Q5XPI4 1314 aa22.23■■□□□ 1.15
GCFC2-202ENST00000409857 HSP90AB2PQ58FF8 381 aa22.23■■□□□ 1.15
GCFC2-202ENST00000409857 UNC5CLQ8IV45 518 aa22.23■■□□□ 1.15
GCFC2-202ENST00000409857 CCDC136Q96JN2 1154 aa22.23■■□□□ 1.15
GCFC2-202ENST00000409857 ERBB3P21860 1342 aa22.22■■□□□ 1.15
GCFC2-202ENST00000409857 USP21Q9UK80 565 aa22.21■■□□□ 1.15
GCFC2-202ENST00000409857 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
GCFC2-202ENST00000409857 ANKRD24Q8TF21 1146 aa22.2■■□□□ 1.14
GCFC2-202ENST00000409857 CFAP53Q96M91 514 aa22.2■■□□□ 1.14
GCFC2-202ENST00000409857 RGPD2P0DJD1 1756 aa22.19■■□□□ 1.14
GCFC2-202ENST00000409857 RGPD1P0DJD0 1748 aa22.19■■□□□ 1.14
GCFC2-202ENST00000409857 EVA1CP58658 441 aa22.19■■□□□ 1.14
GCFC2-202ENST00000409857 ZNF772Q68DY9 489 aaPredicted RBP22.19■■□□□ 1.14
GCFC2-202ENST00000409857 ATRNO75882 1429 aa22.18■■□□□ 1.14
GCFC2-202ENST00000409857 CRB1P82279 1406 aa22.18■■□□□ 1.14
GCFC2-202ENST00000409857 VPS72Q15906 364 aa22.17■■□□□ 1.14
GCFC2-202ENST00000409857 NOP58Q9Y2X3 529 aaKnown RBP22.17■■□□□ 1.14
GCFC2-202ENST00000409857 EIF4A2Q14240 407 aaKnown RBP22.16■■□□□ 1.14
GCFC2-202ENST00000409857 STRN4Q9NRL3 753 aa22.16■■□□□ 1.14
GCFC2-202ENST00000409857 PRKCSHP14314 528 aaPredicted RBP22.15■■□□□ 1.14
GCFC2-202ENST00000409857 WNK3Q9BYP7 1800 aa22.15■■□□□ 1.14
GCFC2-202ENST00000409857 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
GCFC2-202ENST00000409857 IL13P35225 146 aa22.15■■□□□ 1.14
GCFC2-202ENST00000409857 NCAPD2Q15021 1401 aa22.15■■□□□ 1.14
GCFC2-202ENST00000409857 LARP1Q6PKG0 1096 aaKnown RBP22.15■■□□□ 1.14
GCFC2-202ENST00000409857 TRPC5Q9UL62 973 aaPredicted RBP22.15■■□□□ 1.14
GCFC2-202ENST00000409857 CSB-PGBD3P0DP91 1061 aa22.14■■□□□ 1.13
GCFC2-202ENST00000409857 SPATA31A5Q5VU36 1347 aa22.13■■□□□ 1.13
GCFC2-202ENST00000409857 SPATA31A7Q8IWB4 1347 aa22.13■■□□□ 1.13
GCFC2-202ENST00000409857 LTV1Q96GA3 475 aaPredicted RBP22.13■■□□□ 1.13
GCFC2-202ENST00000409857 CARD10Q9BWT7 1032 aa22.13■■□□□ 1.13
GCFC2-202ENST00000409857 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
GCFC2-202ENST00000409857 NBR1Q14596 966 aa22.12■■□□□ 1.13
GCFC2-202ENST00000409857 TOM1L2Q6ZVM7 507 aa22.12■■□□□ 1.13
GCFC2-202ENST00000409857 SPATA31A1Q5TZJ5 1347 aa22.12■■□□□ 1.13
GCFC2-202ENST00000409857 RGS17Q9UGC6 210 aaPredicted RBP22.12■■□□□ 1.13
GCFC2-202ENST00000409857 GLI3P10071 1580 aa22.11■■□□□ 1.13
GCFC2-202ENST00000409857 THRAP3Q9Y2W1 955 aaKnown RBP22.11■■□□□ 1.13
GCFC2-202ENST00000409857 IGSF1Q8N6C5 1336 aa22.1■■□□□ 1.13
GCFC2-202ENST00000409857 QTRT2Q9H974 415 aaKnown RBP22.1■■□□□ 1.13
GCFC2-202ENST00000409857 SALL2Q9Y467 1007 aaPredicted RBP22.1■■□□□ 1.13
GCFC2-202ENST00000409857 NLRP2Q9NX02 1062 aa22.1■■□□□ 1.13
GCFC2-202ENST00000409857 NBPF6Q5VWK0 638 aa22.09■■□□□ 1.13
GCFC2-202ENST00000409857 NBPF4Q96M43 638 aa22.09■■□□□ 1.13
GCFC2-202ENST00000409857 EYA1Q99502 592 aa22.09■■□□□ 1.13
GCFC2-202ENST00000409857 DEKP35659 375 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms