RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
PMS1-204ENST00000409823 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
PMS1-204ENST00000409823 PRDM11Q9NQV5 511 aa16.81■□□□□ 0.28
PMS1-204ENST00000409823 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
PMS1-204ENST00000409823 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
PMS1-204ENST00000409823 CDK12Q9NYV4 1490 aaPredicted RBP16.8■□□□□ 0.28
PMS1-204ENST00000409823 HMOX1P09601 288 aa16.8■□□□□ 0.28
PMS1-204ENST00000409823 IL13P35225 146 aa16.8■□□□□ 0.28
PMS1-204ENST00000409823 IP6K1Q92551 441 aa16.8■□□□□ 0.28
PMS1-204ENST00000409823 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
PMS1-204ENST00000409823 LTN1O94822 1766 aa16.79■□□□□ 0.28
PMS1-204ENST00000409823 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
PMS1-204ENST00000409823 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
PMS1-204ENST00000409823 SALL2Q9Y467 1007 aaPredicted RBP16.78■□□□□ 0.28
PMS1-204ENST00000409823 USHBP1Q8N6Y0 703 aa16.77■□□□□ 0.28
PMS1-204ENST00000409823 CRYBG1Q9Y4K1 1723 aa16.77■□□□□ 0.27
PMS1-204ENST00000409823 HNRNPUQ00839 825 aaKnown RBP eCLIP16.77■□□□□ 0.27
PMS1-204ENST00000409823 AEBP1Q8IUX7 1158 aa16.76■□□□□ 0.27
PMS1-204ENST00000409823 INSRP06213 1382 aa16.76■□□□□ 0.27
PMS1-204ENST00000409823 ANKRD24Q8TF21 1146 aa16.76■□□□□ 0.27
PMS1-204ENST00000409823 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
PMS1-204ENST00000409823 JCADQ9P266 1359 aa16.75■□□□□ 0.27
PMS1-204ENST00000409823 EYA1Q99502 592 aa16.75■□□□□ 0.27
PMS1-204ENST00000409823 SULT6B1Q6IMI4 303 aa16.74■□□□□ 0.27
PMS1-204ENST00000409823 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
PMS1-204ENST00000409823 CPDO75976 1380 aa16.74■□□□□ 0.27
PMS1-204ENST00000409823 CSB-PGBD3P0DP91 1061 aa16.74■□□□□ 0.27
PMS1-204ENST00000409823 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
PMS1-204ENST00000409823 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
PMS1-204ENST00000409823 NBPF6Q5VWK0 638 aa16.73■□□□□ 0.27
PMS1-204ENST00000409823 NBPF4Q96M43 638 aa16.73■□□□□ 0.27
PMS1-204ENST00000409823 BTG4Q9NY30 223 aa16.73■□□□□ 0.27
PMS1-204ENST00000409823 KIF24Q5T7B8 1368 aa16.73■□□□□ 0.27
PMS1-204ENST00000409823 ERBB3P21860 1342 aa16.72■□□□□ 0.27
PMS1-204ENST00000409823 PRKAR2BP31323 418 aa16.71■□□□□ 0.27
PMS1-204ENST00000409823 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
PMS1-204ENST00000409823 NLRP2Q9NX02 1062 aa16.71■□□□□ 0.27
PMS1-204ENST00000409823 C8orf37Q96NL8 207 aa16.71■□□□□ 0.26
PMS1-204ENST00000409823 RRP7AQ9Y3A4 280 aaKnown RBP16.71■□□□□ 0.26
PMS1-204ENST00000409823 COL22A1Q8NFW1 1626 aaPredicted RBP16.71■□□□□ 0.26
PMS1-204ENST00000409823 RGPD5Q99666 1765 aa16.7■□□□□ 0.26
PMS1-204ENST00000409823 APAF1O14727 1248 aa16.7■□□□□ 0.26
PMS1-204ENST00000409823 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
PMS1-204ENST00000409823 EVA1CP58658 441 aa16.7■□□□□ 0.26
PMS1-204ENST00000409823 RSPH6AQ9H0K4 717 aa16.7■□□□□ 0.26
PMS1-204ENST00000409823 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
PMS1-204ENST00000409823 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
PMS1-204ENST00000409823 PHACTR3Q96KR7 559 aa16.69■□□□□ 0.26
PMS1-204ENST00000409823 LARP1Q6PKG0 1096 aaKnown RBP16.68■□□□□ 0.26
PMS1-204ENST00000409823 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
PMS1-204ENST00000409823 FCHSD2O94868 740 aa16.67■□□□□ 0.26
PMS1-204ENST00000409823 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
PMS1-204ENST00000409823 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
PMS1-204ENST00000409823 COL18A1P39060 1754 aa16.67■□□□□ 0.26
PMS1-204ENST00000409823 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
PMS1-204ENST00000409823 NGLY1Q96IV0 654 aa16.67■□□□□ 0.26
PMS1-204ENST00000409823 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
PMS1-204ENST00000409823 LRP6O75581 1613 aa16.66■□□□□ 0.26
PMS1-204ENST00000409823 MEX3CQ5U5Q3 659 aaKnown RBP16.66■□□□□ 0.26
PMS1-204ENST00000409823 FBXO41Q8TF61 875 aa16.66■□□□□ 0.26
PMS1-204ENST00000409823 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
PMS1-204ENST00000409823 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
PMS1-204ENST00000409823 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
PMS1-204ENST00000409823 RGPD2P0DJD1 1756 aa16.65■□□□□ 0.26
PMS1-204ENST00000409823 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
PMS1-204ENST00000409823 LMO7Q8WWI1 1683 aa16.63■□□□□ 0.25
PMS1-204ENST00000409823 NEFMP07197 916 aa16.62■□□□□ 0.25
PMS1-204ENST00000409823 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
PMS1-204ENST00000409823 KDRP35968 1356 aa16.62■□□□□ 0.25
PMS1-204ENST00000409823 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
PMS1-204ENST00000409823 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
PMS1-204ENST00000409823 COL14A1Q05707 1796 aaKnown RBP16.6■□□□□ 0.25
PMS1-204ENST00000409823 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
PMS1-204ENST00000409823 RIPK4P57078 832 aa16.6■□□□□ 0.25
PMS1-204ENST00000409823 MTHFSDQ2M296 383 aaKnown RBP16.59■□□□□ 0.25
PMS1-204ENST00000409823 RAPGEF4Q8WZA2 1011 aa16.59■□□□□ 0.25
PMS1-204ENST00000409823 ABCC6O95255 1503 aa16.58■□□□□ 0.24
PMS1-204ENST00000409823 USP21Q9UK80 565 aa16.58■□□□□ 0.24
PMS1-204ENST00000409823 CARD10Q9BWT7 1032 aa16.57■□□□□ 0.24
PMS1-204ENST00000409823 DCTN1Q14203 1278 aa16.57■□□□□ 0.24
PMS1-204ENST00000409823 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
PMS1-204ENST00000409823 PLCH1Q4KWH8 1693 aa16.57■□□□□ 0.24
PMS1-204ENST00000409823 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
PMS1-204ENST00000409823 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
PMS1-204ENST00000409823 UNC5CLQ8IV45 518 aa16.56■□□□□ 0.24
PMS1-204ENST00000409823 CRB1P82279 1406 aa16.56■□□□□ 0.24
PMS1-204ENST00000409823 SLIT2O94813 1529 aa16.56■□□□□ 0.24
PMS1-204ENST00000409823 AFF2P51816 1311 aa16.56■□□□□ 0.24
PMS1-204ENST00000409823 FNBP4Q8N3X1 1017 aaPredicted RBP16.55■□□□□ 0.24
PMS1-204ENST00000409823 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
PMS1-204ENST00000409823 BCL9LQ86UU0 1499 aa16.55■□□□□ 0.24
PMS1-204ENST00000409823 MEGF6O75095 1541 aa16.55■□□□□ 0.24
PMS1-204ENST00000409823 WWC1Q8IX03 1113 aa16.55■□□□□ 0.24
PMS1-204ENST00000409823 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
PMS1-204ENST00000409823 EP400Q96L91 3159 aa16.54■□□□□ 0.24
PMS1-204ENST00000409823 TATP17735 454 aaPredicted RBP16.54■□□□□ 0.24
PMS1-204ENST00000409823 MCM10Q7L590 875 aa16.54■□□□□ 0.24
PMS1-204ENST00000409823 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
PMS1-204ENST00000409823 IL2RBP14784 551 aa16.53■□□□□ 0.24
PMS1-204ENST00000409823 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms