RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 GLI2P10070 1586 aa4.05□□□□□ -1.76
CUL3-204ENST00000409777 TUBGCP6Q96RT7 1819 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 TTLL13PA6NNM8 815 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 ZMYND10O75800 440 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 ZNF777Q9ULD5 760 aaPredicted RBP4.04□□□□□ -1.76
CUL3-204ENST00000409777 NSD2O96028 1365 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 SNPHO15079 494 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 MAP3K13O43283 966 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 PPP1R37O75864 691 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 PDIA4P13667 645 aaKnown RBP4.04□□□□□ -1.76
CUL3-204ENST00000409777 CLUAP1Q96AJ1 413 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 NOS1P29475 1434 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 PPIP5K1Q6PFW1 1433 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 UGGT1Q9NYU2 1555 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 ZBTB7CA1YPR0 619 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 POTEFA5A3E0 1075 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 SEC24BO95487 1268 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 POTEJP0CG39 1038 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 WDR63Q8IWG1 891 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 EFCAB3Q8N7B9 438 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 CHMP7Q8WUX9 453 aaPredicted RBP4.04□□□□□ -1.76
CUL3-204ENST00000409777 CARD14Q9BXL6 1004 aa4.04□□□□□ -1.76
CUL3-204ENST00000409777 NEXMIFQ5QGS0 1516 aa4.03□□□□□ -1.76
CUL3-204ENST00000409777 POTEMA6NI47 508 aa4.03□□□□□ -1.76
CUL3-204ENST00000409777 CT47B1P0C2W7 299 aaPredicted RBP4.03□□□□□ -1.76
CUL3-204ENST00000409777 WWC1Q8IX03 1113 aa4.03□□□□□ -1.76
CUL3-204ENST00000409777 CCDC82Q8N4S0 544 aa4.03□□□□□ -1.76
CUL3-204ENST00000409777 ISY1Q9ULR0 285 aaKnown RBP4.03□□□□□ -1.76
CUL3-204ENST00000409777 TESPA1A2RU30 521 aaPredicted RBP4.03□□□□□ -1.76
CUL3-204ENST00000409777 L1TD1Q5T7N2 865 aaKnown RBP4.03□□□□□ -1.76
CUL3-204ENST00000409777 POLR3GLQ9BT43 218 aa4.03□□□□□ -1.76
CUL3-204ENST00000409777 TMEM121BQ9BXQ6 578 aaPredicted RBP4.03□□□□□ -1.76
CUL3-204ENST00000409777 RRAGDQ9NQL2 400 aaPredicted RBP4.03□□□□□ -1.76
CUL3-204ENST00000409777 KNSTRNQ9Y448 316 aa4.03□□□□□ -1.76
CUL3-204ENST00000409777 N4BP2Q86UW6 1770 aaPredicted RBP4.03□□□□□ -1.76
CUL3-204ENST00000409777 SETD1AO15047 1707 aaKnown RBP4.03□□□□□ -1.76
CUL3-204ENST00000409777 PIK3R4Q99570 1358 aa4.03□□□□□ -1.77
CUL3-204ENST00000409777 BCAR3O75815 825 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 ZFYVE9O95405 1425 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 SLC4A3P48751 1232 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 RARSP54136 660 aaKnown RBP4.02□□□□□ -1.77
CUL3-204ENST00000409777 WDR43Q15061 677 aaKnown RBP eCLIP4.02□□□□□ -1.77
CUL3-204ENST00000409777 CLCN1P35523 988 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 IRX5P78411 483 aaPredicted RBP4.02□□□□□ -1.77
CUL3-204ENST00000409777 HDAC1Q13547 482 aaPredicted RBP4.02□□□□□ -1.77
CUL3-204ENST00000409777 CAMK2BQ13554 666 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 POTEGQ6S5H5 508 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 CLEC17AQ6ZS10 378 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 PMFBP1Q8TBY8 1022 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 MS4A4AQ96JQ5 239 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 TBC1D2Q9BYX2 928 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 POGKQ9P215 609 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 PHF8Q9UPP1 1060 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 IBTKQ9P2D0 1353 aaPredicted RBP4.02□□□□□ -1.77
CUL3-204ENST00000409777 CENPJQ9HC77 1338 aaPredicted RBP4.02□□□□□ -1.77
CUL3-204ENST00000409777 ASXL2Q76L83 1435 aa4.02□□□□□ -1.77
CUL3-204ENST00000409777 SENP3-EIF4A1A0A087X0R7 540 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 E2F4Q16254 413 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 CRISPLD2Q9H0B8 497 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 KDM4CQ9H3R0 1056 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 KNDC1Q76NI1 1749 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 NCKAP5LQ9HCH0 1330 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 CD109Q6YHK3 1445 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 APAF1O14727 1248 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 BECN1Q14457 450 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 KCTD17Q8N5Z5 321 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 SNX21Q969T3 373 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 TRPC6Q9Y210 931 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 PCDHB15Q9Y5E8 787 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 CD163L1Q9NR16 1453 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 IL16Q14005 1332 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 XRCC6P12956 609 aaKnown RBP eCLIP4.01□□□□□ -1.772e-9■■■■■ 39
CUL3-204ENST00000409777 RBM25P49756 843 aaKnown RBP4.01□□□□□ -1.77
CUL3-204ENST00000409777 CABP2Q9NPB3 220 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 NRKQ7Z2Y5 1582 aa4.01□□□□□ -1.77
CUL3-204ENST00000409777 PNPLA6Q8IY17 1366 aa4□□□□□ -1.77
CUL3-204ENST00000409777 ABCC11Q96J66 1382 aa4□□□□□ -1.77
CUL3-204ENST00000409777 RLBP1P12271 317 aa4□□□□□ -1.77
CUL3-204ENST00000409777 SMC5Q8IY18 1101 aa4□□□□□ -1.77
CUL3-204ENST00000409777 RUNDC1Q96C34 613 aa4□□□□□ -1.77
CUL3-204ENST00000409777 NSD3Q9BZ95 1437 aa4□□□□□ -1.77
CUL3-204ENST00000409777 MLH3Q9UHC1 1453 aa4□□□□□ -1.77
CUL3-204ENST00000409777 ANKRD36BQ8N2N9 1353 aa4□□□□□ -1.77
CUL3-204ENST00000409777 MCM4P33991 863 aa4□□□□□ -1.77
CUL3-204ENST00000409777 OCEL1Q9H607 264 aa4□□□□□ -1.77
CUL3-204ENST00000409777 PTCH1Q13635 1447 aa4□□□□□ -1.77
CUL3-204ENST00000409777 TMEM131LA2VDJ0 1609 aa4□□□□□ -1.77
CUL3-204ENST00000409777 RGL3Q3MIN7 710 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 EFCAB2Q5VUJ9 269 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 PLEKHF1Q96S99 279 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 PDZRN3Q9UPQ7 1066 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 PTPRMP28827 1452 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 DLG5Q8TDM6 1919 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 KIF13AQ9H1H9 1805 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 MYO5BQ9ULV0 1848 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 MVPQ14764 893 aaKnown RBP3.99□□□□□ -1.77
CUL3-204ENST00000409777 LCE2DQ5TA82 110 aaPredicted RBP3.99□□□□□ -1.77
CUL3-204ENST00000409777 PANK1Q8TE04 598 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 L3MBTL3Q96JM7 780 aaPredicted RBP3.99□□□□□ -1.77
CUL3-204ENST00000409777 FAM117AQ9C073 453 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms