RNA–Protein interactions for RNA: ENST00000409740.3

SLC3A1-206, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 1,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-206ENST00000409740 ZNF521Q96K83 1311 aa9.36□□□□□ -0.91
SLC3A1-206ENST00000409740 LMO7Q8WWI1 1683 aa9.36□□□□□ -0.91
SLC3A1-206ENST00000409740 COL16A1Q07092 1604 aaPredicted RBP9.35□□□□□ -0.91
SLC3A1-206ENST00000409740 COL22A1Q8NFW1 1626 aaPredicted RBP9.35□□□□□ -0.91
SLC3A1-206ENST00000409740 EIF4A2Q14240 407 aaKnown RBP9.35□□□□□ -0.91
SLC3A1-206ENST00000409740 HSP90AB2PQ58FF8 381 aa9.35□□□□□ -0.91
SLC3A1-206ENST00000409740 RUNDC1Q96C34 613 aa9.35□□□□□ -0.91
SLC3A1-206ENST00000409740 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
SLC3A1-206ENST00000409740 NUDCQ9Y266 331 aa9.35□□□□□ -0.91
SLC3A1-206ENST00000409740 ABCC6O95255 1503 aa9.34□□□□□ -0.91
SLC3A1-206ENST00000409740 KIF24Q5T7B8 1368 aa9.34□□□□□ -0.91
SLC3A1-206ENST00000409740 PLEKHG5O94827 1062 aa9.34□□□□□ -0.91
SLC3A1-206ENST00000409740 LMOD2Q6P5Q4 547 aa9.34□□□□□ -0.91
SLC3A1-206ENST00000409740 PLEKHF1Q96S99 279 aa9.34□□□□□ -0.91
SLC3A1-206ENST00000409740 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
SLC3A1-206ENST00000409740 RRP7AQ9Y3A4 280 aaKnown RBP9.34□□□□□ -0.91
SLC3A1-206ENST00000409740 ARHGEF10O15013 1369 aa9.33□□□□□ -0.92
SLC3A1-206ENST00000409740 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
SLC3A1-206ENST00000409740 SPATA31A3Q5VYP0 1347 aa9.33□□□□□ -0.92
SLC3A1-206ENST00000409740 HMOX1P09601 288 aa9.33□□□□□ -0.92
SLC3A1-206ENST00000409740 HOXC9P31274 260 aa9.33□□□□□ -0.92
SLC3A1-206ENST00000409740 CDCA7LQ96GN5 454 aa9.33□□□□□ -0.92
SLC3A1-206ENST00000409740 LRRC37A3O60309 1634 aa9.33□□□□□ -0.92
SLC3A1-206ENST00000409740 PRKAR2BP31323 418 aa9.32□□□□□ -0.92
SLC3A1-206ENST00000409740 AMPHP49418 695 aa9.32□□□□□ -0.92
SLC3A1-206ENST00000409740 AEBP1Q8IUX7 1158 aa9.32□□□□□ -0.92
SLC3A1-206ENST00000409740 TCP11L2Q8N4U5 519 aa9.32□□□□□ -0.92
SLC3A1-206ENST00000409740 GCP02774 474 aa9.31□□□□□ -0.92
SLC3A1-206ENST00000409740 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
SLC3A1-206ENST00000409740 IGSF1Q8N6C5 1336 aa9.31□□□□□ -0.92
SLC3A1-206ENST00000409740 MAPK8IP3Q9UPT6 1336 aa9.31□□□□□ -0.92
SLC3A1-206ENST00000409740 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
SLC3A1-206ENST00000409740 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
SLC3A1-206ENST00000409740 KCNH5Q8NCM2 988 aa9.31□□□□□ -0.92
SLC3A1-206ENST00000409740 PLCH1Q4KWH8 1693 aa9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 NCAPD2Q15021 1401 aa9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 KDRP35968 1356 aa9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 FCHSD2O94868 740 aa9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 PDE3BQ13370 1112 aa9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 WNK3Q9BYP7 1800 aa9.3□□□□□ -0.92
SLC3A1-206ENST00000409740 TMPOP42166 694 aaKnown RBP9.29□□□□□ -0.92
SLC3A1-206ENST00000409740 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
SLC3A1-206ENST00000409740 WWC1Q8IX03 1113 aa9.29□□□□□ -0.92
SLC3A1-206ENST00000409740 IP6K1Q92551 441 aa9.29□□□□□ -0.92
SLC3A1-206ENST00000409740 LTV1Q96GA3 475 aaPredicted RBP9.29□□□□□ -0.92
SLC3A1-206ENST00000409740 PHACTR3Q96KR7 559 aa9.29□□□□□ -0.92
SLC3A1-206ENST00000409740 EYA1Q99502 592 aa9.29□□□□□ -0.92
SLC3A1-206ENST00000409740 PKD1L3Q7Z443 1732 aa9.29□□□□□ -0.92
SLC3A1-206ENST00000409740 ZC3H6P61129 1189 aaKnown RBP9.28□□□□□ -0.92
SLC3A1-206ENST00000409740 GOLGA2Q08379 1002 aa9.28□□□□□ -0.92
SLC3A1-206ENST00000409740 NGEFQ8N5V2 710 aa9.28□□□□□ -0.92
SLC3A1-206ENST00000409740 PARP4Q9UKK3 1724 aaKnown RBP9.28□□□□□ -0.92
SLC3A1-206ENST00000409740 CPDO75976 1380 aa9.28□□□□□ -0.92
SLC3A1-206ENST00000409740 KIAA0232Q92628 1395 aa9.28□□□□□ -0.92
SLC3A1-206ENST00000409740 COL14A1Q05707 1796 aaKnown RBP9.27□□□□□ -0.92
SLC3A1-206ENST00000409740 NRAPQ86VF7 1730 aa9.27□□□□□ -0.93
SLC3A1-206ENST00000409740 SHANK3Q9BYB0 1731 aa9.27□□□□□ -0.93
SLC3A1-206ENST00000409740 SLFN5Q08AF3 891 aa9.27□□□□□ -0.93
SLC3A1-206ENST00000409740 CCDC27Q2M243 656 aa9.27□□□□□ -0.93
SLC3A1-206ENST00000409740 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
SLC3A1-206ENST00000409740 USHBP1Q8N6Y0 703 aa9.27□□□□□ -0.93
SLC3A1-206ENST00000409740 TRIM35Q9UPQ4 493 aa9.27□□□□□ -0.93
SLC3A1-206ENST00000409740 SUPT16HQ9Y5B9 1047 aaKnown RBP9.27□□□□□ -0.93
SLC3A1-206ENST00000409740 NFE2L2Q16236 605 aa9.26□□□□□ -0.93
SLC3A1-206ENST00000409740 LRRC59Q96AG4 307 aaKnown RBP9.26□□□□□ -0.93
SLC3A1-206ENST00000409740 PNNQ9H307 717 aaKnown RBP9.26□□□□□ -0.93
SLC3A1-206ENST00000409740 AXIN2Q9Y2T1 843 aa9.26□□□□□ -0.93
SLC3A1-206ENST00000409740 ERBB3P21860 1342 aa9.26□□□□□ -0.93
SLC3A1-206ENST00000409740 SIPA1L3O60292 1781 aaPredicted RBP9.25□□□□□ -0.93
SLC3A1-206ENST00000409740 RIPK4P57078 832 aa9.25□□□□□ -0.93
SLC3A1-206ENST00000409740 CHRNA2Q15822 529 aa9.25□□□□□ -0.93
SLC3A1-206ENST00000409740 NCBP3Q53F19 620 aaKnown RBP9.25□□□□□ -0.93
SLC3A1-206ENST00000409740 TRMT2AQ8IZ69 625 aaKnown RBP9.25□□□□□ -0.93
SLC3A1-206ENST00000409740 ANKRD24Q8TF21 1146 aa9.25□□□□□ -0.93
SLC3A1-206ENST00000409740 COL5A2P05997 1499 aaPredicted RBP9.25□□□□□ -0.93
SLC3A1-206ENST00000409740 ADAMTS7Q9UKP4 1686 aa9.25□□□□□ -0.93
SLC3A1-206ENST00000409740 E9PSI1 815 aa9.24□□□□□ -0.93
SLC3A1-206ENST00000409740 NEFMP07197 916 aa9.24□□□□□ -0.93
SLC3A1-206ENST00000409740 NBPF6Q5VWK0 638 aa9.24□□□□□ -0.93
SLC3A1-206ENST00000409740 NBPF4Q96M43 638 aa9.24□□□□□ -0.93
SLC3A1-206ENST00000409740 THUMPD2Q9BTF0 503 aaKnown RBP9.24□□□□□ -0.93
SLC3A1-206ENST00000409740 SCN11AQ9UI33 1791 aa9.24□□□□□ -0.93
SLC3A1-206ENST00000409740 MEGF6O75095 1541 aa9.24□□□□□ -0.93
SLC3A1-206ENST00000409740 KDM3BQ7LBC6 1761 aa9.24□□□□□ -0.93
SLC3A1-206ENST00000409740 IRX6P78412 446 aaPredicted RBP9.23□□□□□ -0.93
SLC3A1-206ENST00000409740 WDR63Q8IWG1 891 aa9.23□□□□□ -0.93
SLC3A1-206ENST00000409740 RNF123Q5XPI4 1314 aa9.23□□□□□ -0.93
SLC3A1-206ENST00000409740 NWD2Q9ULI1 1742 aa9.23□□□□□ -0.93
SLC3A1-206ENST00000409740 FAM83GA6ND36 823 aa9.22□□□□□ -0.93
SLC3A1-206ENST00000409740 PIP4K2BP78356 416 aa9.22□□□□□ -0.93
SLC3A1-206ENST00000409740 RCAN3Q9UKA8 241 aa9.22□□□□□ -0.93
SLC3A1-206ENST00000409740 FANCIQ9NVI1 1328 aa9.22□□□□□ -0.93
SLC3A1-206ENST00000409740 DCTN1Q14203 1278 aa9.22□□□□□ -0.93
SLC3A1-206ENST00000409740 MTHFSDQ2M296 383 aaKnown RBP9.22□□□□□ -0.93
SLC3A1-206ENST00000409740 TSR2Q969E8 191 aaKnown RBP9.22□□□□□ -0.93
SLC3A1-206ENST00000409740 PRDM11Q9NQV5 511 aa9.22□□□□□ -0.93
SLC3A1-206ENST00000409740 UBAP1LF5GYI3 381 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms