RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 ABCC2Q92887 1545 aa17.1■□□□□ 0.33
ITGA6-202ENST00000409080 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
ITGA6-202ENST00000409080 DNAJC2Q99543 621 aaKnown RBP17.1■□□□□ 0.33
ITGA6-202ENST00000409080 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
ITGA6-202ENST00000409080 TSR1Q2NL82 804 aaKnown RBP17.1■□□□□ 0.33
ITGA6-202ENST00000409080 LNPKQ9C0E8 428 aa17.1■□□□□ 0.33
ITGA6-202ENST00000409080 SCAF11Q99590 1463 aaKnown RBP17.09■□□□□ 0.33
ITGA6-202ENST00000409080 NSD2O96028 1365 aa17.09■□□□□ 0.33
ITGA6-202ENST00000409080 CDC45O75419 566 aa17.09■□□□□ 0.33
ITGA6-202ENST00000409080 KIAA0556O60303 1618 aa17.08■□□□□ 0.33
ITGA6-202ENST00000409080 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.33
ITGA6-202ENST00000409080 GCC1Q96CN9 775 aa17.08■□□□□ 0.33
ITGA6-202ENST00000409080 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.33
ITGA6-202ENST00000409080 PANK1Q8TE04 598 aa17.08■□□□□ 0.32
ITGA6-202ENST00000409080 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
ITGA6-202ENST00000409080 NME9Q86XW9 330 aa17.07■□□□□ 0.32
ITGA6-202ENST00000409080 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
ITGA6-202ENST00000409080 TPM3P06753 285 aa17.07■□□□□ 0.32
ITGA6-202ENST00000409080 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
ITGA6-202ENST00000409080 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
ITGA6-202ENST00000409080 NOC3LQ8WTT2 800 aaKnown RBP17.07■□□□□ 0.32
ITGA6-202ENST00000409080 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
ITGA6-202ENST00000409080 TPM1P09493 284 aa17.07■□□□□ 0.32
ITGA6-202ENST00000409080 RIMS2Q9UQ26 1411 aa17.06■□□□□ 0.32
ITGA6-202ENST00000409080 NUP153P49790 1475 aaKnown RBP17.06■□□□□ 0.32
ITGA6-202ENST00000409080 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
ITGA6-202ENST00000409080 ANKRD20A12PQ8NF67 263 aa17.06■□□□□ 0.32
ITGA6-202ENST00000409080 TTC21AQ8NDW8 1320 aa17.06■□□□□ 0.32
ITGA6-202ENST00000409080 RBM19Q9Y4C8 960 aaKnown RBP17.06■□□□□ 0.32
ITGA6-202ENST00000409080 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
ITGA6-202ENST00000409080 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
ITGA6-202ENST00000409080 PTCD1O75127 700 aaKnown RBP17.05■□□□□ 0.32
ITGA6-202ENST00000409080 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
ITGA6-202ENST00000409080 IFNL2Q8IZJ0 200 aa17.05■□□□□ 0.32
ITGA6-202ENST00000409080 SMC3Q9UQE7 1217 aa17.05■□□□□ 0.32
ITGA6-202ENST00000409080 SYCP2Q9BX26 1530 aa17.05■□□□□ 0.32
ITGA6-202ENST00000409080 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
ITGA6-202ENST00000409080 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
ITGA6-202ENST00000409080 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
ITGA6-202ENST00000409080 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
ITGA6-202ENST00000409080 AK7Q96M32 723 aa17.04■□□□□ 0.32
ITGA6-202ENST00000409080 A0A087WZG4 1122 aa17.04■□□□□ 0.32
ITGA6-202ENST00000409080 ABCC11Q96J66 1382 aa17.03■□□□□ 0.32
ITGA6-202ENST00000409080 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
ITGA6-202ENST00000409080 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
ITGA6-202ENST00000409080 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
ITGA6-202ENST00000409080 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
ITGA6-202ENST00000409080 FMNL2Q96PY5 1086 aa17.03■□□□□ 0.32
ITGA6-202ENST00000409080 R3HCC1Q9Y3T6 440 aaKnown RBP17.03■□□□□ 0.32
ITGA6-202ENST00000409080 PDE4AP27815 886 aa17.02■□□□□ 0.32
ITGA6-202ENST00000409080 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.32
ITGA6-202ENST00000409080 ACEP12821 1306 aa17.02■□□□□ 0.32
ITGA6-202ENST00000409080 NUP160Q12769 1436 aa17.02■□□□□ 0.32
ITGA6-202ENST00000409080 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
ITGA6-202ENST00000409080 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.31
ITGA6-202ENST00000409080 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.31
ITGA6-202ENST00000409080 BECN2A8MW95 431 aa17.01■□□□□ 0.31
ITGA6-202ENST00000409080 LRRCC1Q9C099 1032 aa17.01■□□□□ 0.31
ITGA6-202ENST00000409080 BCL11BQ9C0K0 894 aaPredicted RBP17.01■□□□□ 0.31
ITGA6-202ENST00000409080 SKOR2Q2VWA4 1001 aaPredicted RBP17.01■□□□□ 0.31
ITGA6-202ENST00000409080 GZF1Q9H116 711 aaPredicted RBP17■□□□□ 0.31
ITGA6-202ENST00000409080 IFT57Q9NWB7 429 aa17■□□□□ 0.31
ITGA6-202ENST00000409080 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
ITGA6-202ENST00000409080 LMTK3Q96Q04 1460 aa17■□□□□ 0.31
ITGA6-202ENST00000409080 PRM3Q9NNZ6 103 aa17■□□□□ 0.31
ITGA6-202ENST00000409080 AKAP2Q9Y2D5 859 aa17■□□□□ 0.31
ITGA6-202ENST00000409080 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
ITGA6-202ENST00000409080 ATF7IPQ6VMQ6 1270 aa16.99■□□□□ 0.31
ITGA6-202ENST00000409080 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
ITGA6-202ENST00000409080 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
ITGA6-202ENST00000409080 SIL1Q9H173 461 aa16.99■□□□□ 0.31
ITGA6-202ENST00000409080 ZSCAN29Q8IWY8 852 aaPredicted RBP16.99■□□□□ 0.31
ITGA6-202ENST00000409080 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
ITGA6-202ENST00000409080 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
ITGA6-202ENST00000409080 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
ITGA6-202ENST00000409080 DUSP27Q5VZP5 1158 aa16.98■□□□□ 0.31
ITGA6-202ENST00000409080 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
ITGA6-202ENST00000409080 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
ITGA6-202ENST00000409080 NAP1L5Q96NT1 182 aaPredicted RBP16.98■□□□□ 0.31
ITGA6-202ENST00000409080 SRGAP3O43295 1099 aa16.97■□□□□ 0.31
ITGA6-202ENST00000409080 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
ITGA6-202ENST00000409080 HYPKQ9NX55 129 aa16.97■□□□□ 0.31
ITGA6-202ENST00000409080 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
ITGA6-202ENST00000409080 RRP12Q5JTH9 1297 aaKnown RBP16.97■□□□□ 0.31
ITGA6-202ENST00000409080 WWC2Q6AWC2 1192 aa16.97■□□□□ 0.31
ITGA6-202ENST00000409080 RAI14Q9P0K7 980 aa16.97■□□□□ 0.31
ITGA6-202ENST00000409080 VPS37CA5D8V6 355 aaPredicted RBP16.97■□□□□ 0.31
ITGA6-202ENST00000409080 GOLGA6L3A6NEY3 463 aa16.97■□□□□ 0.31
ITGA6-202ENST00000409080 ATP10AO60312 1499 aa16.97■□□□□ 0.31
ITGA6-202ENST00000409080 TRAPPC8Q9Y2L5 1435 aa16.97■□□□□ 0.31
ITGA6-202ENST00000409080 ATP2B2Q01814 1243 aa16.97■□□□□ 0.31
ITGA6-202ENST00000409080 BICD2Q8TD16 824 aa16.96■□□□□ 0.31
ITGA6-202ENST00000409080 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
ITGA6-202ENST00000409080 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.31
ITGA6-202ENST00000409080 EMILIN1Q9Y6C2 1016 aa16.96■□□□□ 0.31
ITGA6-202ENST00000409080 HSPA2P54652 639 aa16.95■□□□□ 0.3
ITGA6-202ENST00000409080 C8orf37Q96NL8 207 aa16.95■□□□□ 0.3
ITGA6-202ENST00000409080 LRP2BPQ9P2M1 347 aa16.95■□□□□ 0.3
ITGA6-202ENST00000409080 METTL24Q5JXM2 366 aa16.95■□□□□ 0.3
ITGA6-202ENST00000409080 RPAP2Q8IXW5 612 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms