RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 ANKRD1Q15327 319 aa12.74□□□□□ -0.37
PBRM1-205ENST00000409057 LRRCC1Q9C099 1032 aa12.74□□□□□ -0.37
PBRM1-205ENST00000409057 PCF11O94913 1555 aaKnown RBP12.73□□□□□ -0.37
PBRM1-205ENST00000409057 STK38Q15208 465 aa12.73□□□□□ -0.37
PBRM1-205ENST00000409057 ABCA10Q8WWZ4 1543 aa12.73□□□□□ -0.37
PBRM1-205ENST00000409057 FCHSD2O94868 740 aa12.73□□□□□ -0.37
PBRM1-205ENST00000409057 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
PBRM1-205ENST00000409057 FILIP1LQ4L180 1135 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 CAGE1Q8TC20 777 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 MPNDQ8N594 471 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 SRCIN1Q9C0H9 1055 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
PBRM1-205ENST00000409057 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 H0YHG0 523 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 JMYQ8N9B5 988 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 SMARCE1Q969G3 411 aa12.72□□□□□ -0.37
PBRM1-205ENST00000409057 MAP3K1Q13233 1512 aa12.71□□□□□ -0.37
PBRM1-205ENST00000409057 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
PBRM1-205ENST00000409057 PDIA4P13667 645 aaKnown RBP12.71□□□□□ -0.37
PBRM1-205ENST00000409057 ESCO1Q5FWF5 840 aa12.71□□□□□ -0.37
PBRM1-205ENST00000409057 LARP1BQ659C4 914 aaKnown RBP12.71□□□□□ -0.37
PBRM1-205ENST00000409057 RAPGEF3O95398 923 aa12.7□□□□□ -0.38
PBRM1-205ENST00000409057 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
PBRM1-205ENST00000409057 ABCC5O15440 1437 aa12.7□□□□□ -0.38
PBRM1-205ENST00000409057 OFD1O75665 1012 aa12.7□□□□□ -0.38
PBRM1-205ENST00000409057 DNAJC2Q99543 621 aaKnown RBP12.7□□□□□ -0.38
PBRM1-205ENST00000409057 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
PBRM1-205ENST00000409057 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
PBRM1-205ENST00000409057 SART3Q15020 963 aaKnown RBP12.7□□□□□ -0.38
PBRM1-205ENST00000409057 RAD21O60216 631 aa12.7□□□□□ -0.38
PBRM1-205ENST00000409057 TTLL5Q6EMB2 1281 aa12.7□□□□□ -0.38
PBRM1-205ENST00000409057 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
PBRM1-205ENST00000409057 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
PBRM1-205ENST00000409057 ZSCAN31Q96LW9 406 aaPredicted RBP12.69□□□□□ -0.38
PBRM1-205ENST00000409057 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
PBRM1-205ENST00000409057 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
PBRM1-205ENST00000409057 SERPINC1P01008 464 aa12.69□□□□□ -0.38
PBRM1-205ENST00000409057 DCTN1Q14203 1278 aa12.69□□□□□ -0.38
PBRM1-205ENST00000409057 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
PBRM1-205ENST00000409057 RRS1Q15050 365 aaKnown RBP12.69□□□□□ -0.38
PBRM1-205ENST00000409057 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
PBRM1-205ENST00000409057 ME1P48163 572 aa12.68□□□□□ -0.38
PBRM1-205ENST00000409057 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
PBRM1-205ENST00000409057 IQGAP2Q13576 1575 aa12.68□□□□□ -0.38
PBRM1-205ENST00000409057 C20orf194Q5TEA3 1177 aa12.68□□□□□ -0.38
PBRM1-205ENST00000409057 PDCL2Q8N4E4 241 aa12.68□□□□□ -0.38
PBRM1-205ENST00000409057 PTPN23Q9H3S7 1636 aa12.68□□□□□ -0.38
PBRM1-205ENST00000409057 NCOA1Q15788 1441 aa12.68□□□□□ -0.38
PBRM1-205ENST00000409057 SYCE3A1L190 88 aa12.68□□□□□ -0.38
PBRM1-205ENST00000409057 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 CAMSAP2Q08AD1 1489 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
PBRM1-205ENST00000409057 ATP2B1P20020 1258 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 SPATA32Q96LK8 384 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 BLOC1S2Q6QNY1 142 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 THEMISQ8N1K5 641 aaPredicted RBP12.67□□□□□ -0.38
PBRM1-205ENST00000409057 CFAP45Q9UL16 551 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 PPP6R1Q9UPN7 881 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
PBRM1-205ENST00000409057 RRP12Q5JTH9 1297 aaKnown RBP12.67□□□□□ -0.38
PBRM1-205ENST00000409057 CEP57L1Q8IYX8 460 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 TRIM34Q9BYJ4 488 aa12.67□□□□□ -0.38
PBRM1-205ENST00000409057 TATP17735 454 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-205ENST00000409057 TBC1D2Q9BYX2 928 aa12.66□□□□□ -0.38
PBRM1-205ENST00000409057 AXDND1Q5T1B0 1012 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-205ENST00000409057 SLC26A8Q96RN1 970 aa12.66□□□□□ -0.38
PBRM1-205ENST00000409057 TCEAL9Q9UHQ7 104 aa12.66□□□□□ -0.38
PBRM1-205ENST00000409057 ERLIN1O75477 346 aa12.66□□□□□ -0.38
PBRM1-205ENST00000409057 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
PBRM1-205ENST00000409057 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-205ENST00000409057 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
PBRM1-205ENST00000409057 SRGAP3O43295 1099 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 CBFA2T2O43439 604 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 STK3Q13188 491 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 PRM3Q9NNZ6 103 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 PDRG1Q9NUG6 133 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
PBRM1-205ENST00000409057 PPFIBP1Q86W92 1011 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 THUMPD2Q9BTF0 503 aaKnown RBP12.65□□□□□ -0.38
PBRM1-205ENST00000409057 TXLNAP40222 546 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
PBRM1-205ENST00000409057 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.39
PBRM1-205ENST00000409057 EIF3JO75822 258 aaKnown RBP12.64□□□□□ -0.39
PBRM1-205ENST00000409057 EPS15P42566 896 aa12.64□□□□□ -0.39
PBRM1-205ENST00000409057 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
PBRM1-205ENST00000409057 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
PBRM1-205ENST00000409057 FILIP1Q7Z7B0 1213 aa12.64□□□□□ -0.39
PBRM1-205ENST00000409057 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
PBRM1-205ENST00000409057 FYB1O15117 783 aa12.64□□□□□ -0.39
PBRM1-205ENST00000409057 SIL1Q9H173 461 aa12.64□□□□□ -0.39
PBRM1-205ENST00000409057 MAGEC2Q9UBF1 373 aaPredicted RBP12.64□□□□□ -0.39
PBRM1-205ENST00000409057 MYO6Q9UM54 1294 aa12.64□□□□□ -0.39
PBRM1-205ENST00000409057 CT47A1Q5JQC4 288 aaPredicted RBP12.64□□□□□ -0.39
PBRM1-205ENST00000409057 IL1RAPL2Q9NP60 686 aa12.64□□□□□ -0.39
PBRM1-205ENST00000409057 ZNHIT6Q9NWK9 470 aaKnown RBP12.64□□□□□ -0.39
PBRM1-205ENST00000409057 PLB1Q6P1J6 1458 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms