RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
TUBA3D-202ENST00000409047 YY1P25490 414 aa19.03■□□□□ 0.64
TUBA3D-202ENST00000409047 NLRP6P59044 892 aa19.03■□□□□ 0.64
TUBA3D-202ENST00000409047 PDGFDQ9GZP0 370 aaPredicted RBP19.03■□□□□ 0.64
TUBA3D-202ENST00000409047 NINLQ9Y2I6 1382 aa19.03■□□□□ 0.64
TUBA3D-202ENST00000409047 AKAP12Q02952 1782 aa19.02■□□□□ 0.64
TUBA3D-202ENST00000409047 MARCH10Q8NA82 808 aaPredicted RBP19.02■□□□□ 0.64
TUBA3D-202ENST00000409047 CPSF1Q10570 1443 aaKnown RBP19.01■□□□□ 0.63
TUBA3D-202ENST00000409047 DDB1Q16531 1140 aa19.01■□□□□ 0.63
TUBA3D-202ENST00000409047 BCL11BQ9C0K0 894 aaPredicted RBP19.01■□□□□ 0.63
TUBA3D-202ENST00000409047 WDR17Q8IZU2 1322 aa19■□□□□ 0.63
TUBA3D-202ENST00000409047 ZBTB7CA1YPR0 619 aa18.99■□□□□ 0.63
TUBA3D-202ENST00000409047 TOM1L2Q6ZVM7 507 aa18.99■□□□□ 0.63
TUBA3D-202ENST00000409047 ARHGEF25Q86VW2 580 aa18.99■□□□□ 0.63
TUBA3D-202ENST00000409047 NFAT5O94916 1531 aa18.99■□□□□ 0.63
TUBA3D-202ENST00000409047 TRPM1Q7Z4N2 1603 aa18.98■□□□□ 0.63
TUBA3D-202ENST00000409047 MYOM1P52179 1685 aa18.98■□□□□ 0.63
TUBA3D-202ENST00000409047 PPP1R1BQ9UD71 204 aaPredicted RBP18.97■□□□□ 0.63
TUBA3D-202ENST00000409047 PTGER2P43116 358 aa18.96■□□□□ 0.63
TUBA3D-202ENST00000409047 TTC21BQ7Z4L5 1316 aa18.96■□□□□ 0.63
TUBA3D-202ENST00000409047 CARD10Q9BWT7 1032 aa18.94■□□□□ 0.62
TUBA3D-202ENST00000409047 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
TUBA3D-202ENST00000409047 CDCA7Q9BWT1 371 aaPredicted RBP18.93■□□□□ 0.62
TUBA3D-202ENST00000409047 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
TUBA3D-202ENST00000409047 TXNRD1Q16881 649 aa18.92■□□□□ 0.62
TUBA3D-202ENST00000409047 EVC2Q86UK5 1308 aa18.92■□□□□ 0.62
TUBA3D-202ENST00000409047 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
TUBA3D-202ENST00000409047 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
TUBA3D-202ENST00000409047 ABCC6O95255 1503 aa18.91■□□□□ 0.62
TUBA3D-202ENST00000409047 PAPPAQ13219 1627 aa18.91■□□□□ 0.62
TUBA3D-202ENST00000409047 USP54Q70EL1 1684 aa18.91■□□□□ 0.62
TUBA3D-202ENST00000409047 TNS2Q63HR2 1409 aa18.91■□□□□ 0.62
TUBA3D-202ENST00000409047 KCNH5Q8NCM2 988 aa18.9■□□□□ 0.62
TUBA3D-202ENST00000409047 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
TUBA3D-202ENST00000409047 ZNF692Q9BU19 519 aaPredicted RBP18.9■□□□□ 0.62
TUBA3D-202ENST00000409047 TTC21AQ8NDW8 1320 aa18.9■□□□□ 0.62
TUBA3D-202ENST00000409047 SOX12O15370 315 aa18.89■□□□□ 0.61
TUBA3D-202ENST00000409047 SLC15A2Q16348 729 aa18.88■□□□□ 0.61
TUBA3D-202ENST00000409047 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
TUBA3D-202ENST00000409047 CCDC7Q96M83 1385 aa18.87■□□□□ 0.61
TUBA3D-202ENST00000409047 CD163L1Q9NR16 1453 aa18.87■□□□□ 0.61
TUBA3D-202ENST00000409047 EXOC5O00471 708 aa18.86■□□□□ 0.61
TUBA3D-202ENST00000409047 LTN1O94822 1766 aa18.86■□□□□ 0.61
TUBA3D-202ENST00000409047 USP31Q70CQ4 1352 aa18.85■□□□□ 0.61
TUBA3D-202ENST00000409047 GOLGB1Q14789 3259 aaKnown RBP18.85■□□□□ 0.61
TUBA3D-202ENST00000409047 CSB-PGBD3P0DP91 1061 aa18.85■□□□□ 0.61
TUBA3D-202ENST00000409047 BTAF1O14981 1849 aa18.85■□□□□ 0.61
TUBA3D-202ENST00000409047 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
TUBA3D-202ENST00000409047 ERBB3P21860 1342 aa18.84■□□□□ 0.61
TUBA3D-202ENST00000409047 SIN3AQ96ST3 1273 aa18.84■□□□□ 0.61
TUBA3D-202ENST00000409047 SYT17Q9BSW7 474 aa18.84■□□□□ 0.61
TUBA3D-202ENST00000409047 FHDC1Q9C0D6 1143 aaPredicted RBP18.84■□□□□ 0.61
TUBA3D-202ENST00000409047 STK32BQ9NY57 414 aa18.84■□□□□ 0.61
TUBA3D-202ENST00000409047 CHD4Q14839 1912 aa18.84■□□□□ 0.61
TUBA3D-202ENST00000409047 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.61
TUBA3D-202ENST00000409047 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.61
TUBA3D-202ENST00000409047 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
TUBA3D-202ENST00000409047 ZNF784Q8NCA9 323 aaPredicted RBP18.82■□□□□ 0.6
TUBA3D-202ENST00000409047 MTFR1LQ9H019 292 aa18.82■□□□□ 0.6
TUBA3D-202ENST00000409047 ACSBG1Q96GR2 724 aa18.81■□□□□ 0.6
TUBA3D-202ENST00000409047 NME9Q86XW9 330 aa18.8■□□□□ 0.6
TUBA3D-202ENST00000409047 KAT6BQ8WYB5 2073 aa18.8■□□□□ 0.6
TUBA3D-202ENST00000409047 COL24A1Q17RW2 1714 aa18.8■□□□□ 0.6
TUBA3D-202ENST00000409047 ZNF827Q17R98 1081 aa18.79■□□□□ 0.6
TUBA3D-202ENST00000409047 LRRC4BQ9NT99 713 aa18.79■□□□□ 0.6
TUBA3D-202ENST00000409047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.78■□□□□ 0.6
TUBA3D-202ENST00000409047 MAP3K5Q99683 1374 aa18.78■□□□□ 0.6
TUBA3D-202ENST00000409047 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.6
TUBA3D-202ENST00000409047 IL2RBP14784 551 aa18.77■□□□□ 0.6
TUBA3D-202ENST00000409047 NLRP2Q9NX02 1062 aa18.76■□□□□ 0.59
TUBA3D-202ENST00000409047 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
TUBA3D-202ENST00000409047 ANKRD24Q8TF21 1146 aa18.75■□□□□ 0.59
TUBA3D-202ENST00000409047 ARXQ96QS3 562 aa18.74■□□□□ 0.59
TUBA3D-202ENST00000409047 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
TUBA3D-202ENST00000409047 SLC12A5Q9H2X9 1139 aa18.73■□□□□ 0.59
TUBA3D-202ENST00000409047 SHANK3Q9BYB0 1731 aa18.73■□□□□ 0.59
TUBA3D-202ENST00000409047 EDC4Q6P2E9 1401 aaKnown RBP18.73■□□□□ 0.59
TUBA3D-202ENST00000409047 NEUROD1Q13562 356 aa18.72■□□□□ 0.59
TUBA3D-202ENST00000409047 A0A1W2PP64 1363 aa18.71■□□□□ 0.59
TUBA3D-202ENST00000409047 FAM208AQ9UK61 1670 aaKnown RBP18.71■□□□□ 0.59
TUBA3D-202ENST00000409047 LY75O60449 1722 aa18.71■□□□□ 0.59
TUBA3D-202ENST00000409047 RGPD2P0DJD1 1756 aa18.7■□□□□ 0.58
TUBA3D-202ENST00000409047 PNPLA7Q6ZV29 1317 aa18.69■□□□□ 0.58
TUBA3D-202ENST00000409047 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
TUBA3D-202ENST00000409047 NSD2O96028 1365 aa18.68■□□□□ 0.58
TUBA3D-202ENST00000409047 IP6K1Q92551 441 aa18.68■□□□□ 0.58
TUBA3D-202ENST00000409047 TMC1Q8TDI8 760 aa18.67■□□□□ 0.58
TUBA3D-202ENST00000409047 KCNQ4P56696 695 aa18.66■□□□□ 0.58
TUBA3D-202ENST00000409047 SLC27A3Q5K4L6 730 aa18.66■□□□□ 0.58
TUBA3D-202ENST00000409047 HDGFL2Q7Z4V5 671 aaPredicted RBP18.66■□□□□ 0.58
TUBA3D-202ENST00000409047 CEP350Q5VT06 3117 aa18.65■□□□□ 0.58
TUBA3D-202ENST00000409047 SLC16A10Q8TF71 515 aa18.65■□□□□ 0.58
TUBA3D-202ENST00000409047 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
TUBA3D-202ENST00000409047 C1QTNF8P60827 252 aa18.64■□□□□ 0.57
TUBA3D-202ENST00000409047 DDX54Q8TDD1 881 aaKnown RBP18.64■□□□□ 0.57
TUBA3D-202ENST00000409047 ANKRD36BQ8N2N9 1353 aa18.64■□□□□ 0.57
TUBA3D-202ENST00000409047 MEGF6O75095 1541 aa18.64■□□□□ 0.57
TUBA3D-202ENST00000409047 FBLN1P23142 703 aa18.63■□□□□ 0.57
TUBA3D-202ENST00000409047 PUS7Q96PZ0 661 aaKnown RBP18.63■□□□□ 0.57
TUBA3D-202ENST00000409047 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms