RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 NME9Q86XW9 330 aa25.87■■□□□ 1.73
PTPN18-203ENST00000409022 THSD7AQ9UPZ6 1657 aa25.87■■□□□ 1.73
PTPN18-203ENST00000409022 CSB-PGBD3P0DP91 1061 aa25.85■■□□□ 1.73
PTPN18-203ENST00000409022 FAM196AQ6ZSG2 479 aa25.85■■□□□ 1.73
PTPN18-203ENST00000409022 ZRANB1Q9UGI0 708 aa25.85■■□□□ 1.73
PTPN18-203ENST00000409022 BAG6P46379 1132 aa25.84■■□□□ 1.73
PTPN18-203ENST00000409022 WDR17Q8IZU2 1322 aa25.84■■□□□ 1.73
PTPN18-203ENST00000409022 ANKRD36BQ8N2N9 1353 aa25.82■■□□□ 1.72
PTPN18-203ENST00000409022 C11orf95C9JLR9 678 aaPredicted RBP25.82■■□□□ 1.72
PTPN18-203ENST00000409022 CDCA7Q9BWT1 371 aaPredicted RBP25.82■■□□□ 1.72
PTPN18-203ENST00000409022 AXIN2Q9Y2T1 843 aa25.81■■□□□ 1.72
PTPN18-203ENST00000409022 NFAT5O94916 1531 aa25.8■■□□□ 1.72
PTPN18-203ENST00000409022 ABCC6O95255 1503 aa25.8■■□□□ 1.72
PTPN18-203ENST00000409022 COG3Q96JB2 828 aa25.8■■□□□ 1.72
PTPN18-203ENST00000409022 DEFB132Q7Z7B7 95 aa25.79■■□□□ 1.72
PTPN18-203ENST00000409022 FAM182BQ5T319 152 aa25.78■■□□□ 1.72
PTPN18-203ENST00000409022 CARD10Q9BWT7 1032 aa25.77■■□□□ 1.72
PTPN18-203ENST00000409022 OVOS2A0A0J9YW53 1432 aa25.76■■□□□ 1.71
PTPN18-203ENST00000409022 OVOS2Q6IE36 1432 aa25.76■■□□□ 1.71
PTPN18-203ENST00000409022 USP54Q70EL1 1684 aa25.75■■□□□ 1.71
PTPN18-203ENST00000409022 DDB1Q16531 1140 aa25.75■■□□□ 1.71
PTPN18-203ENST00000409022 CCDC7Q96M83 1385 aa25.74■■□□□ 1.71
PTPN18-203ENST00000409022 COL18A1P39060 1754 aa25.74■■□□□ 1.71
PTPN18-203ENST00000409022 EIF4G2P78344 907 aaKnown RBP eCLIP25.73■■□□□ 1.71
PTPN18-203ENST00000409022 TRIM37O94972 964 aa25.71■■□□□ 1.71
PTPN18-203ENST00000409022 ERBB3P21860 1342 aa25.7■■□□□ 1.71
PTPN18-203ENST00000409022 RGPD1P0DJD0 1748 aa25.69■■□□□ 1.7
PTPN18-203ENST00000409022 NLRP2Q9NX02 1062 aa25.69■■□□□ 1.7
PTPN18-203ENST00000409022 ANKRD24Q8TF21 1146 aa25.68■■□□□ 1.7
PTPN18-203ENST00000409022 IP6K1Q92551 441 aa25.68■■□□□ 1.7
PTPN18-203ENST00000409022 OVOS2A0A0G2JMS6 1433 aa25.68■■□□□ 1.7
PTPN18-203ENST00000409022 DISP2A7MBM2 1401 aa25.68■■□□□ 1.7
PTPN18-203ENST00000409022 PARP4Q9UKK3 1724 aaKnown RBP25.68■■□□□ 1.7
PTPN18-203ENST00000409022 APBA3O96018 575 aa25.67■■□□□ 1.7
PTPN18-203ENST00000409022 EN1Q05925 392 aaPredicted RBP25.67■■□□□ 1.7
PTPN18-203ENST00000409022 EXOC5O00471 708 aa25.66■■□□□ 1.7
PTPN18-203ENST00000409022 AMPHP49418 695 aa25.66■■□□□ 1.7
PTPN18-203ENST00000409022 FYB1O15117 783 aa25.65■■□□□ 1.7
PTPN18-203ENST00000409022 PARD3Q8TEW0 1356 aa25.65■■□□□ 1.7
PTPN18-203ENST00000409022 GGNBP2Q9H3C7 697 aa25.64■■□□□ 1.7
PTPN18-203ENST00000409022 POLR3GLQ9BT43 218 aa25.63■■□□□ 1.69
PTPN18-203ENST00000409022 MAP3K19Q56UN5 1328 aa25.63■■□□□ 1.69
PTPN18-203ENST00000409022 HSPA5P11021 654 aaKnown RBP25.62■■□□□ 1.69
PTPN18-203ENST00000409022 IL2RBP14784 551 aa25.61■■□□□ 1.69
PTPN18-203ENST00000409022 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
PTPN18-203ENST00000409022 LRRC37A3O60309 1634 aa25.59■■□□□ 1.69
PTPN18-203ENST00000409022 LTN1O94822 1766 aa25.59■■□□□ 1.69
PTPN18-203ENST00000409022 HOXC9P31274 260 aa25.59■■□□□ 1.69
PTPN18-203ENST00000409022 NSD3Q9BZ95 1437 aa25.59■■□□□ 1.69
PTPN18-203ENST00000409022 EZH2Q15910 746 aaKnown RBP25.58■■□□□ 1.69
PTPN18-203ENST00000409022 LTV1Q96GA3 475 aaPredicted RBP25.58■■□□□ 1.69
PTPN18-203ENST00000409022 CAMKK2Q96RR4 588 aa25.58■■□□□ 1.69
PTPN18-203ENST00000409022 CGNL1Q0VF96 1302 aa25.58■■□□□ 1.69
PTPN18-203ENST00000409022 RGPD5Q99666 1765 aa25.57■■□□□ 1.68
PTPN18-203ENST00000409022 BCL9O00512 1426 aa25.57■■□□□ 1.68
PTPN18-203ENST00000409022 MARCH10Q8NA82 808 aaPredicted RBP25.57■■□□□ 1.68
PTPN18-203ENST00000409022 TNS2Q63HR2 1409 aa25.56■■□□□ 1.68
PTPN18-203ENST00000409022 CARD14Q9BXL6 1004 aa25.56■■□□□ 1.68
PTPN18-203ENST00000409022 BCL11BQ9C0K0 894 aaPredicted RBP25.56■■□□□ 1.68
PTPN18-203ENST00000409022 SMG6Q86US8 1419 aaKnown RBP25.55■■□□□ 1.68
PTPN18-203ENST00000409022 TNS1Q9HBL0 1735 aaKnown RBP25.55■■□□□ 1.68
PTPN18-203ENST00000409022 RRS1Q15050 365 aaKnown RBP25.54■■□□□ 1.68
PTPN18-203ENST00000409022 KIF24Q5T7B8 1368 aa25.54■■□□□ 1.68
PTPN18-203ENST00000409022 NBPF14Q5TI25 921 aa25.53■■□□□ 1.68
PTPN18-203ENST00000409022 WNK3Q9BYP7 1800 aa25.53■■□□□ 1.68
PTPN18-203ENST00000409022 FBLN1P23142 703 aa25.52■■□□□ 1.68
PTPN18-203ENST00000409022 PLSCR1O15162 318 aa25.5■■□□□ 1.67
PTPN18-203ENST00000409022 FLT4P35916 1363 aa25.5■■□□□ 1.67
PTPN18-203ENST00000409022 MYOM1P52179 1685 aa25.5■■□□□ 1.67
PTPN18-203ENST00000409022 PEAK1Q9H792 1746 aa25.49■■□□□ 1.67
PTPN18-203ENST00000409022 FAM208AQ9UK61 1670 aaKnown RBP25.48■■□□□ 1.67
PTPN18-203ENST00000409022 PSDA5PKW4 1024 aaPredicted RBP25.48■■□□□ 1.67
PTPN18-203ENST00000409022 INSRP06213 1382 aa25.47■■□□□ 1.67
PTPN18-203ENST00000409022 KIF20BQ96Q89 1820 aa25.47■■□□□ 1.67
PTPN18-203ENST00000409022 R3HDM1Q15032 1099 aaKnown RBP25.46■■□□□ 1.67
PTPN18-203ENST00000409022 PANK3Q9H999 370 aa25.45■■□□□ 1.66
PTPN18-203ENST00000409022 PPM1GO15355 546 aaPredicted RBP25.43■■□□□ 1.66
PTPN18-203ENST00000409022 HSP90AB2PQ58FF8 381 aa25.43■■□□□ 1.66
PTPN18-203ENST00000409022 RAPGEF4Q8WZA2 1011 aa25.43■■□□□ 1.66
PTPN18-203ENST00000409022 DDX54Q8TDD1 881 aaKnown RBP25.42■■□□□ 1.66
PTPN18-203ENST00000409022 NBPF6Q5VWK0 638 aa25.41■■□□□ 1.66
PTPN18-203ENST00000409022 ZCRB1Q8TBF4 217 aaKnown RBP25.41■■□□□ 1.66
PTPN18-203ENST00000409022 NBPF4Q96M43 638 aa25.41■■□□□ 1.66
PTPN18-203ENST00000409022 NSD2O96028 1365 aa25.41■■□□□ 1.66
PTPN18-203ENST00000409022 EMILIN1Q9Y6C2 1016 aa25.4■■□□□ 1.66
PTPN18-203ENST00000409022 TATP17735 454 aaPredicted RBP25.39■■□□□ 1.66
PTPN18-203ENST00000409022 ACSBG1Q96GR2 724 aa25.39■■□□□ 1.66
PTPN18-203ENST00000409022 KNSTRNQ9Y448 316 aa25.38■■□□□ 1.65
PTPN18-203ENST00000409022 PTF1AQ7RTS3 328 aa25.37■■□□□ 1.65
PTPN18-203ENST00000409022 SRCAPQ6ZRS2 3230 aa25.37■■□□□ 1.65
PTPN18-203ENST00000409022 WASHC2AQ641Q2 1341 aa25.37■■□□□ 1.65
PTPN18-203ENST00000409022 RGPD3A6NKT7 1758 aaPredicted RBP25.36■■□□□ 1.65
PTPN18-203ENST00000409022 RGPD4Q7Z3J3 1758 aa25.36■■□□□ 1.65
PTPN18-203ENST00000409022 RREB1Q92766 1687 aa25.36■■□□□ 1.65
PTPN18-203ENST00000409022 KCNQ2O43526 872 aa25.36■■□□□ 1.65
PTPN18-203ENST00000409022 SBF2Q86WG5 1849 aa25.35■■□□□ 1.65
PTPN18-203ENST00000409022 USHBP1Q8N6Y0 703 aa25.35■■□□□ 1.65
PTPN18-203ENST00000409022 TNNT2P45379 298 aaPredicted RBP25.34■■□□□ 1.65
PTPN18-203ENST00000409022 TXNRD1Q16881 649 aa25.34■■□□□ 1.65
PTPN18-203ENST00000409022 POLKQ9UBT6 870 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms