RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 ARHGEF10O15013 1369 aa13.49□□□□□ -0.25
SNORD88C-201ENST00000408061 FBLN1P23142 703 aa13.49□□□□□ -0.25
SNORD88C-201ENST00000408061 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
SNORD88C-201ENST00000408061 IP6K1Q92551 441 aa13.49□□□□□ -0.25
SNORD88C-201ENST00000408061 MYH16Q9H6N6 1097 aa13.49□□□□□ -0.25
SNORD88C-201ENST00000408061 RCAN3Q9UKA8 241 aa13.49□□□□□ -0.25
SNORD88C-201ENST00000408061 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
SNORD88C-201ENST00000408061 PEAK1Q9H792 1746 aa13.48□□□□□ -0.25
SNORD88C-201ENST00000408061 GCP02774 474 aa13.48□□□□□ -0.25
SNORD88C-201ENST00000408061 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
SNORD88C-201ENST00000408061 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
SNORD88C-201ENST00000408061 NFE2L2Q16236 605 aa13.48□□□□□ -0.25
SNORD88C-201ENST00000408061 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
SNORD88C-201ENST00000408061 NFAT5O94916 1531 aa13.48□□□□□ -0.25
SNORD88C-201ENST00000408061 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
SNORD88C-201ENST00000408061 HOXC9P31274 260 aa13.47□□□□□ -0.25
SNORD88C-201ENST00000408061 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
SNORD88C-201ENST00000408061 KDRP35968 1356 aa13.46□□□□□ -0.25
SNORD88C-201ENST00000408061 ABCC6O95255 1503 aa13.46□□□□□ -0.25
SNORD88C-201ENST00000408061 RIPK4P57078 832 aa13.46□□□□□ -0.25
SNORD88C-201ENST00000408061 FKBP8Q14318 412 aa13.46□□□□□ -0.25
SNORD88C-201ENST00000408061 BRINP3Q76B58 766 aa13.46□□□□□ -0.25
SNORD88C-201ENST00000408061 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
SNORD88C-201ENST00000408061 LTN1O94822 1766 aa13.45□□□□□ -0.26
SNORD88C-201ENST00000408061 SPATA31A3Q5VYP0 1347 aa13.45□□□□□ -0.26
SNORD88C-201ENST00000408061 IGSF1Q8N6C5 1336 aa13.45□□□□□ -0.26
SNORD88C-201ENST00000408061 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
SNORD88C-201ENST00000408061 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
SNORD88C-201ENST00000408061 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
SNORD88C-201ENST00000408061 PXDNQ92626 1479 aa13.44□□□□□ -0.26
SNORD88C-201ENST00000408061 NEUROD2Q15784 382 aa13.44□□□□□ -0.26
SNORD88C-201ENST00000408061 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
SNORD88C-201ENST00000408061 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
SNORD88C-201ENST00000408061 HMOX1P09601 288 aa13.43□□□□□ -0.26
SNORD88C-201ENST00000408061 MED1Q15648 1581 aaPredicted RBP13.43□□□□□ -0.26
SNORD88C-201ENST00000408061 NUTM2GQ5VZR2 741 aa13.43□□□□□ -0.26
SNORD88C-201ENST00000408061 TRIM35Q9UPQ4 493 aa13.43□□□□□ -0.26
SNORD88C-201ENST00000408061 PLEKHG2Q9H7P9 1386 aa13.43□□□□□ -0.26
SNORD88C-201ENST00000408061 SOX12O15370 315 aa13.42□□□□□ -0.26
SNORD88C-201ENST00000408061 LMOD2Q6P5Q4 547 aa13.42□□□□□ -0.26
SNORD88C-201ENST00000408061 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
SNORD88C-201ENST00000408061 EYA1Q99502 592 aa13.42□□□□□ -0.26
SNORD88C-201ENST00000408061 RRP7AQ9Y3A4 280 aaKnown RBP13.42□□□□□ -0.26
SNORD88C-201ENST00000408061 GAS2L2Q8NHY3 880 aa13.41□□□□□ -0.26
SNORD88C-201ENST00000408061 PHACTR3Q96KR7 559 aa13.41□□□□□ -0.26
SNORD88C-201ENST00000408061 LTBP4Q8N2S1 1624 aa13.4□□□□□ -0.26
SNORD88C-201ENST00000408061 RRP1P56182 461 aaKnown RBP13.4□□□□□ -0.26
SNORD88C-201ENST00000408061 GNAI1P63096 354 aa13.4□□□□□ -0.26
SNORD88C-201ENST00000408061 CPDO75976 1380 aa13.4□□□□□ -0.26
SNORD88C-201ENST00000408061 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
SNORD88C-201ENST00000408061 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
SNORD88C-201ENST00000408061 HAP1P54257 671 aaPredicted RBP13.39□□□□□ -0.27
SNORD88C-201ENST00000408061 XPCQ01831 940 aaPredicted RBP13.39□□□□□ -0.27
SNORD88C-201ENST00000408061 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
SNORD88C-201ENST00000408061 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
SNORD88C-201ENST00000408061 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
SNORD88C-201ENST00000408061 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
SNORD88C-201ENST00000408061 PPP4R2Q9NY27 417 aa13.38□□□□□ -0.27
SNORD88C-201ENST00000408061 NCAPD2Q15021 1401 aa13.38□□□□□ -0.27
SNORD88C-201ENST00000408061 CRYBG1Q9Y4K1 1723 aa13.36□□□□□ -0.27
SNORD88C-201ENST00000408061 ZNF853P0CG23 659 aa13.36□□□□□ -0.27
SNORD88C-201ENST00000408061 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
SNORD88C-201ENST00000408061 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
SNORD88C-201ENST00000408061 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
SNORD88C-201ENST00000408061 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
SNORD88C-201ENST00000408061 FAM208AQ9UK61 1670 aaKnown RBP13.36□□□□□ -0.27
SNORD88C-201ENST00000408061 MS4A1P11836 297 aa13.35□□□□□ -0.27
SNORD88C-201ENST00000408061 AEBP1Q8IUX7 1158 aa13.35□□□□□ -0.27
SNORD88C-201ENST00000408061 RTF1Q92541 710 aaKnown RBP13.35□□□□□ -0.27
SNORD88C-201ENST00000408061 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
SNORD88C-201ENST00000408061 AAMPQ13685 434 aa13.34□□□□□ -0.27
SNORD88C-201ENST00000408061 ANKRD24Q8TF21 1146 aa13.34□□□□□ -0.27
SNORD88C-201ENST00000408061 COL18A1P39060 1754 aa13.34□□□□□ -0.27
SNORD88C-201ENST00000408061 AHDC1Q5TGY3 1603 aaPredicted RBP13.34□□□□□ -0.27
SNORD88C-201ENST00000408061 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
SNORD88C-201ENST00000408061 TOM1O60784 492 aa13.33□□□□□ -0.28
SNORD88C-201ENST00000408061 PDE3AQ14432 1141 aa13.33□□□□□ -0.28
SNORD88C-201ENST00000408061 PLEKHO1Q53GL0 409 aaPredicted RBP13.33□□□□□ -0.28
SNORD88C-201ENST00000408061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNORD88C-201ENST00000408061 GNAT3A8MTJ3 354 aa13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 RARSP54136 660 aaKnown RBP13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 BRPF1P55201 1214 aaPredicted RBP13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 ZC3H6P61129 1189 aaKnown RBP13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 MTHFSDQ2M296 383 aaKnown RBP13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 ALDH1L2Q3SY69 923 aa13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 ERBB3P21860 1342 aa13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
SNORD88C-201ENST00000408061 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
SNORD88C-201ENST00000408061 CHL1O00533 1208 aa13.3□□□□□ -0.28
SNORD88C-201ENST00000408061 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
SNORD88C-201ENST00000408061 LMO7Q8WWI1 1683 aa13.3□□□□□ -0.28
SNORD88C-201ENST00000408061 KIAA0232Q92628 1395 aa13.3□□□□□ -0.28
SNORD88C-201ENST00000408061 ROBO1Q9Y6N7 1651 aa13.29□□□□□ -0.28
SNORD88C-201ENST00000408061 ZBTB7CA1YPR0 619 aa13.29□□□□□ -0.28
SNORD88C-201ENST00000408061 IPO8O15397 1037 aaKnown RBP13.29□□□□□ -0.28
SNORD88C-201ENST00000408061 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms