RNA–Protein interactions for RNA: ENST00000407293.5

KRTCAP3-202, Transcript of keratinocyte associated protein 3, humanhuman

TSL 2 BASIC

Gene KRTCAP3, Length 942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-202ENST00000407293 SOX12O15370 315 aa25.48■■□□□ 1.67
KRTCAP3-202ENST00000407293 CPSF1Q10570 1443 aaKnown RBP25.47■■□□□ 1.67
KRTCAP3-202ENST00000407293 KCNH5Q8NCM2 988 aa25.47■■□□□ 1.67
KRTCAP3-202ENST00000407293 LRRC37A3O60309 1634 aa25.47■■□□□ 1.67
KRTCAP3-202ENST00000407293 PTF1AQ7RTS3 328 aa25.46■■□□□ 1.67
KRTCAP3-202ENST00000407293 TTC21AQ8NDW8 1320 aa25.44■■□□□ 1.66
KRTCAP3-202ENST00000407293 MARCH10Q8NA82 808 aaPredicted RBP25.44■■□□□ 1.66
KRTCAP3-202ENST00000407293 AKAP12Q02952 1782 aa25.44■■□□□ 1.66
KRTCAP3-202ENST00000407293 PLSCR1O15162 318 aa25.43■■□□□ 1.66
KRTCAP3-202ENST00000407293 BCL11BQ9C0K0 894 aaPredicted RBP25.43■■□□□ 1.66
KRTCAP3-202ENST00000407293 SBF2Q86WG5 1849 aa25.42■■□□□ 1.66
KRTCAP3-202ENST00000407293 CSB-PGBD3P0DP91 1061 aa25.42■■□□□ 1.66
KRTCAP3-202ENST00000407293 CDCA7Q9BWT1 371 aaPredicted RBP25.42■■□□□ 1.66
KRTCAP3-202ENST00000407293 CARD10Q9BWT7 1032 aa25.42■■□□□ 1.66
KRTCAP3-202ENST00000407293 KTN1Q86UP2 1357 aaKnown RBP25.42■■□□□ 1.66
KRTCAP3-202ENST00000407293 RGPD5Q99666 1765 aa25.41■■□□□ 1.66
KRTCAP3-202ENST00000407293 NFAT5O94916 1531 aa25.39■■□□□ 1.66
KRTCAP3-202ENST00000407293 SPON1Q9HCB6 807 aa25.39■■□□□ 1.66
KRTCAP3-202ENST00000407293 WNK3Q9BYP7 1800 aa25.38■■□□□ 1.65
KRTCAP3-202ENST00000407293 KCNQ2O43526 872 aa25.38■■□□□ 1.65
KRTCAP3-202ENST00000407293 PROM2Q8N271 834 aa25.38■■□□□ 1.65
KRTCAP3-202ENST00000407293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.37■■□□□ 1.65
KRTCAP3-202ENST00000407293 ANO8Q9HCE9 1232 aaPredicted RBP25.37■■□□□ 1.65
KRTCAP3-202ENST00000407293 BCL9O00512 1426 aa25.37■■□□□ 1.65
KRTCAP3-202ENST00000407293 RGPD3A6NKT7 1758 aaPredicted RBP25.36■■□□□ 1.65
KRTCAP3-202ENST00000407293 RGPD4Q7Z3J3 1758 aa25.36■■□□□ 1.65
KRTCAP3-202ENST00000407293 EXOC5O00471 708 aa25.35■■□□□ 1.65
KRTCAP3-202ENST00000407293 CARD11Q9BXL7 1154 aa25.34■■□□□ 1.65
KRTCAP3-202ENST00000407293 PPP1R1BQ9UD71 204 aaPredicted RBP25.34■■□□□ 1.65
KRTCAP3-202ENST00000407293 SBNO2Q9Y2G9 1366 aa25.33■■□□□ 1.65
KRTCAP3-202ENST00000407293 USP31Q70CQ4 1352 aa25.32■■□□□ 1.64
KRTCAP3-202ENST00000407293 MON2Q7Z3U7 1717 aa25.32■■□□□ 1.64
KRTCAP3-202ENST00000407293 NME9Q86XW9 330 aa25.32■■□□□ 1.64
KRTCAP3-202ENST00000407293 CD163L1Q9NR16 1453 aa25.32■■□□□ 1.64
KRTCAP3-202ENST00000407293 CCDC7Q96M83 1385 aa25.31■■□□□ 1.64
KRTCAP3-202ENST00000407293 TMC1Q8TDI8 760 aa25.31■■□□□ 1.64
KRTCAP3-202ENST00000407293 PDGFDQ9GZP0 370 aaPredicted RBP25.31■■□□□ 1.64
KRTCAP3-202ENST00000407293 SLC12A5Q9H2X9 1139 aa25.3■■□□□ 1.64
KRTCAP3-202ENST00000407293 ABCC6O95255 1503 aa25.29■■□□□ 1.64
KRTCAP3-202ENST00000407293 TXNRD1Q16881 649 aa25.28■■□□□ 1.64
KRTCAP3-202ENST00000407293 ERBB3P21860 1342 aa25.28■■□□□ 1.64
KRTCAP3-202ENST00000407293 NLRP2Q9NX02 1062 aa25.27■■□□□ 1.64
KRTCAP3-202ENST00000407293 HDGFL2Q7Z4V5 671 aaPredicted RBP25.26■■□□□ 1.63
KRTCAP3-202ENST00000407293 TNS2Q63HR2 1409 aa25.26■■□□□ 1.63
KRTCAP3-202ENST00000407293 CASZ1Q86V15 1759 aa25.26■■□□□ 1.63
KRTCAP3-202ENST00000407293 NINLQ9Y2I6 1382 aa25.25■■□□□ 1.63
KRTCAP3-202ENST00000407293 USP54Q70EL1 1684 aa25.24■■□□□ 1.63
KRTCAP3-202ENST00000407293 ZBTB7AO95365 584 aa25.24■■□□□ 1.63
KRTCAP3-202ENST00000407293 YY1P25490 414 aa25.23■■□□□ 1.63
KRTCAP3-202ENST00000407293 ACSBG1Q96GR2 724 aa25.23■■□□□ 1.63
KRTCAP3-202ENST00000407293 IL2RBP14784 551 aa25.22■■□□□ 1.63
KRTCAP3-202ENST00000407293 ANKRD24Q8TF21 1146 aa25.22■■□□□ 1.63
KRTCAP3-202ENST00000407293 STK32BQ9NY57 414 aa25.22■■□□□ 1.63
KRTCAP3-202ENST00000407293 EDC4Q6P2E9 1401 aaKnown RBP25.21■■□□□ 1.63
KRTCAP3-202ENST00000407293 SLC15A2Q16348 729 aa25.21■■□□□ 1.63
KRTCAP3-202ENST00000407293 LTN1O94822 1766 aa25.21■■□□□ 1.63
KRTCAP3-202ENST00000407293 A0A1W2PP64 1363 aa25.2■■□□□ 1.63
KRTCAP3-202ENST00000407293 TERF2IPQ9NYB0 399 aa25.2■■□□□ 1.62
KRTCAP3-202ENST00000407293 ATF5Q9Y2D1 282 aaPredicted RBP25.2■■□□□ 1.62
KRTCAP3-202ENST00000407293 PTGER2P43116 358 aa25.19■■□□□ 1.62
KRTCAP3-202ENST00000407293 TONSLQ96HA7 1378 aa25.18■■□□□ 1.62
KRTCAP3-202ENST00000407293 PUS7Q96PZ0 661 aaKnown RBP25.18■■□□□ 1.62
KRTCAP3-202ENST00000407293 NHSQ6T4R5 1651 aa25.17■■□□□ 1.62
KRTCAP3-202ENST00000407293 DCAF8L1A6NGE4 600 aa25.17■■□□□ 1.62
KRTCAP3-202ENST00000407293 IP6K1Q92551 441 aa25.14■■□□□ 1.62
KRTCAP3-202ENST00000407293 TESK2Q96S53 571 aa25.14■■□□□ 1.62
KRTCAP3-202ENST00000407293 ST20-MTHFSA0A0A6YYL1 179 aa25.12■■□□□ 1.61
KRTCAP3-202ENST00000407293 LTV1Q96GA3 475 aaPredicted RBP25.12■■□□□ 1.61
KRTCAP3-202ENST00000407293 MYOM1P52179 1685 aa25.12■■□□□ 1.61
KRTCAP3-202ENST00000407293 MTFR1LQ9H019 292 aa25.11■■□□□ 1.61
KRTCAP3-202ENST00000407293 TRIM26Q12899 539 aaPredicted RBP25.1■■□□□ 1.61
KRTCAP3-202ENST00000407293 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
KRTCAP3-202ENST00000407293 SGIP1Q9BQI5 828 aa25.1■■□□□ 1.61
KRTCAP3-202ENST00000407293 FBLN1P23142 703 aa25.09■■□□□ 1.61
KRTCAP3-202ENST00000407293 FHDC1Q9C0D6 1143 aaPredicted RBP25.09■■□□□ 1.61
KRTCAP3-202ENST00000407293 LRRC4BQ9NT99 713 aa25.09■■□□□ 1.61
KRTCAP3-202ENST00000407293 BTAF1O14981 1849 aa25.09■■□□□ 1.61
KRTCAP3-202ENST00000407293 KAT6BQ8WYB5 2073 aa25.08■■□□□ 1.61
KRTCAP3-202ENST00000407293 COG3Q96JB2 828 aa25.08■■□□□ 1.61
KRTCAP3-202ENST00000407293 SYT17Q9BSW7 474 aa25.08■■□□□ 1.61
KRTCAP3-202ENST00000407293 ZNF827Q17R98 1081 aa25.07■■□□□ 1.6
KRTCAP3-202ENST00000407293 PAPPAQ13219 1627 aa25.07■■□□□ 1.6
KRTCAP3-202ENST00000407293 UTRNP46939 3433 aa25.07■■□□□ 1.6
KRTCAP3-202ENST00000407293 MAP3K19Q56UN5 1328 aa25.07■■□□□ 1.6
KRTCAP3-202ENST00000407293 HOXC9P31274 260 aa25.05■■□□□ 1.6
KRTCAP3-202ENST00000407293 AMPHP49418 695 aa25.03■■□□□ 1.6
KRTCAP3-202ENST00000407293 ARXQ96QS3 562 aa25.02■■□□□ 1.6
KRTCAP3-202ENST00000407293 FAM208AQ9UK61 1670 aaKnown RBP25.01■■□□□ 1.59
KRTCAP3-202ENST00000407293 SLC24A1O60721 1099 aa25.01■■□□□ 1.59
KRTCAP3-202ENST00000407293 AKT1S1Q96B36 256 aa25.01■■□□□ 1.59
KRTCAP3-202ENST00000407293 PRIM1P49642 420 aaKnown RBP25■■□□□ 1.59
KRTCAP3-202ENST00000407293 SLC27A3Q5K4L6 730 aa25■■□□□ 1.59
KRTCAP3-202ENST00000407293 ANKRD36BQ8N2N9 1353 aa25■■□□□ 1.59
KRTCAP3-202ENST00000407293 SYTL4Q96C24 671 aaPredicted RBP24.99■■□□□ 1.59
KRTCAP3-202ENST00000407293 KCNQ4P56696 695 aa24.98■■□□□ 1.59
KRTCAP3-202ENST00000407293 ZCRB1Q8TBF4 217 aaKnown RBP24.98■■□□□ 1.59
KRTCAP3-202ENST00000407293 FYB1O15117 783 aa24.97■■□□□ 1.59
KRTCAP3-202ENST00000407293 RRS1Q15050 365 aaKnown RBP24.97■■□□□ 1.59
KRTCAP3-202ENST00000407293 RGPD2P0DJD1 1756 aa24.96■■□□□ 1.59
KRTCAP3-202ENST00000407293 GGNBP2Q9H3C7 697 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms