RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 NOC3LQ8WTT2 800 aaKnown RBP6.03□□□□□ -1.44
HDAC9-204ENST00000406451 SRCIN1Q9C0H9 1055 aa6.03□□□□□ -1.44
HDAC9-204ENST00000406451 CEP89Q96ST8 783 aa6.03□□□□□ -1.44
HDAC9-204ENST00000406451 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.03□□□□□ -1.44
HDAC9-204ENST00000406451 RBM19Q9Y4C8 960 aaKnown RBP6.03□□□□□ -1.44
HDAC9-204ENST00000406451 CT47B1P0C2W7 299 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-204ENST00000406451 TPM2P07951 284 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 CCDC47Q96A33 483 aaKnown RBP6.02□□□□□ -1.45
HDAC9-204ENST00000406451 HIP1O00291 1037 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 PTCD1O75127 700 aaKnown RBP6.02□□□□□ -1.45
HDAC9-204ENST00000406451 RBM5P52756 815 aaKnown RBP eCLIP6.02□□□□□ -1.45
HDAC9-204ENST00000406451 NME9Q86XW9 330 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 WDR63Q8IWG1 891 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 BRMS1Q9HCU9 246 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 SCAF11Q99590 1463 aaKnown RBP6.02□□□□□ -1.45
HDAC9-204ENST00000406451 EXOC5O00471 708 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 NFE2L2Q16236 605 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 RIMS2Q9UQ26 1411 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 CFAP43Q8NDM7 1665 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 NAP1L5Q96NT1 182 aaPredicted RBP6.02□□□□□ -1.45
HDAC9-204ENST00000406451 MTMR7Q9Y216 660 aa6.02□□□□□ -1.45
HDAC9-204ENST00000406451 NPHP3Q7Z494 1330 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 IGHMBP2P38935 993 aaKnown RBP6.01□□□□□ -1.45
HDAC9-204ENST00000406451 MPRIPQ6WCQ1 1025 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 SIL1Q9H173 461 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 NOB1Q9ULX3 412 aaKnown RBP6.01□□□□□ -1.45
HDAC9-204ENST00000406451 USHBP1Q8N6Y0 703 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 HOOK1Q9UJC3 728 aaKnown RBP6.01□□□□□ -1.45
HDAC9-204ENST00000406451 ABCA5Q8WWZ7 1642 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 XBP1P17861 261 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 PSMA5P28066 241 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 TSR1Q2NL82 804 aaKnown RBP6.01□□□□□ -1.45
HDAC9-204ENST00000406451 TTC21BQ7Z4L5 1316 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 CFAP74Q9C0B2 1584 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 DDX11L8A8MPP1 907 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 CDC45O75419 566 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 FOXD4L6Q3SYB3 417 aaPredicted RBP6.01□□□□□ -1.45
HDAC9-204ENST00000406451 FOXD4L3Q6VB84 417 aaPredicted RBP6.01□□□□□ -1.45
HDAC9-204ENST00000406451 ZNF428Q96B54 188 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 PRM3Q9NNZ6 103 aa6.01□□□□□ -1.45
HDAC9-204ENST00000406451 C14orf93Q9H972 538 aaKnown RBP6□□□□□ -1.45
HDAC9-204ENST00000406451 TPM3P06753 285 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 ATP2B2Q01814 1243 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 RRP12Q5JTH9 1297 aaKnown RBP6□□□□□ -1.45
HDAC9-204ENST00000406451 CNKSR2Q8WXI2 1034 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 NACAP1Q9BZK3 213 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 PDE4AP27815 886 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 CEP170Q5SW79 1584 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 PDE4CQ08493 712 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 IPO9Q96P70 1041 aaKnown RBP6□□□□□ -1.45
HDAC9-204ENST00000406451 SMC3Q9UQE7 1217 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 TPM1P09493 284 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 TMOD2Q9NZR1 351 aa6□□□□□ -1.45
HDAC9-204ENST00000406451 TMPOP42166 694 aaKnown RBP6□□□□□ -1.45
HDAC9-204ENST00000406451 NSD2O96028 1365 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 VPS37CA5D8V6 355 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-204ENST00000406451 FOSBP53539 338 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 C1orf115Q9H7X2 142 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 LMTK3Q96Q04 1460 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 TAF7Q15545 349 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-204ENST00000406451 CEP126Q9P2H0 1117 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 MYO5CQ9NQX4 1742 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 TRAPPC8Q9Y2L5 1435 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 ANKRD20A12PQ8NF67 263 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 EIF2AK4Q9P2K8 1649 aaKnown RBP5.99□□□□□ -1.45
HDAC9-204ENST00000406451 MCM10Q7L590 875 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 CDCA7LQ96GN5 454 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 C8orf37Q96NL8 207 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 NUP160Q12769 1436 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 GOLGA6L19H0YKK7 550 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 HSP90AB3PQ58FF7 597 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 ACEP12821 1306 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 BECN2A8MW95 431 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 HSPA2P54652 639 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 ZSCAN25Q6NSZ9 544 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 AK7Q96M32 723 aa5.99□□□□□ -1.45
HDAC9-204ENST00000406451 BCL11BQ9C0K0 894 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-204ENST00000406451 SLC4A3P48751 1232 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 DUSP27Q5VZP5 1158 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 RPGRQ92834 1020 aaKnown RBP5.98□□□□□ -1.45
HDAC9-204ENST00000406451 LRRCC1Q9C099 1032 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 MIS18AQ9NYP9 233 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 UHRF1BP1Q6BDS2 1440 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 PDE3AQ14432 1141 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 LARP1Q6PKG0 1096 aaKnown RBP5.98□□□□□ -1.45
HDAC9-204ENST00000406451 EMILIN1Q9Y6C2 1016 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 ABCC11Q96J66 1382 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 BICD2Q8TD16 824 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 GCC1Q96CN9 775 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 ANKIB1Q9P2G1 1089 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 FMNL2Q96PY5 1086 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 SRGAP3O43295 1099 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 CHRNA2Q15822 529 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 ATF7IPQ6VMQ6 1270 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 AACSQ86V21 672 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 CCDC85AQ96PX6 553 aaPredicted RBP5.98□□□□□ -1.45
HDAC9-204ENST00000406451 RPRD2Q5VT52 1461 aaKnown RBP5.98□□□□□ -1.45
HDAC9-204ENST00000406451 TTC21AQ8NDW8 1320 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 GOLGA6L3A6NEY3 463 aa5.98□□□□□ -1.45
HDAC9-204ENST00000406451 ANKRD24Q8TF21 1146 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 1936 ms