RNA–Protein interactions for RNA: ENST00000406028.1

CLDN5-202, Transcript of claudin 5, humanhuman

TSL 2 BASIC

Gene CLDN5, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5-202ENST00000406028 SHPRHQ149N8 1683 aa22.54■■□□□ 1.2
CLDN5-202ENST00000406028 ROBO2Q9HCK4 1378 aa22.53■■□□□ 1.2
CLDN5-202ENST00000406028 RUNDC1Q96C34 613 aa22.53■■□□□ 1.2
CLDN5-202ENST00000406028 TNPO1Q92973 898 aaKnown RBP22.52■■□□□ 1.2
CLDN5-202ENST00000406028 SLC26A8Q96RN1 970 aa22.52■■□□□ 1.2
CLDN5-202ENST00000406028 WDR63Q8IWG1 891 aa22.51■■□□□ 1.19
CLDN5-202ENST00000406028 NCOA3Q9Y6Q9 1424 aa22.51■■□□□ 1.19
CLDN5-202ENST00000406028 TPM2P07951 284 aa22.51■■□□□ 1.19
CLDN5-202ENST00000406028 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
CLDN5-202ENST00000406028 KIF20BQ96Q89 1820 aa22.5■■□□□ 1.19
CLDN5-202ENST00000406028 CPSF1Q10570 1443 aaKnown RBP22.5■■□□□ 1.19
CLDN5-202ENST00000406028 EDC4Q6P2E9 1401 aaKnown RBP22.5■■□□□ 1.19
CLDN5-202ENST00000406028 DIP2AQ14689 1571 aa22.49■■□□□ 1.19
CLDN5-202ENST00000406028 DNAJC5Q9H3Z4 198 aa22.49■■□□□ 1.19
CLDN5-202ENST00000406028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.48■■□□□ 1.19
CLDN5-202ENST00000406028 FTSJ3Q8IY81 847 aaKnown RBP22.48■■□□□ 1.19
CLDN5-202ENST00000406028 ADGRB2O60241 1585 aa22.48■■□□□ 1.19
CLDN5-202ENST00000406028 ZKSCAN2Q63HK3 967 aa22.47■■□□□ 1.19
CLDN5-202ENST00000406028 DZIP1LQ8IYY4 767 aaKnown RBP22.47■■□□□ 1.19
CLDN5-202ENST00000406028 RIMS1Q86UR5 1692 aaKnown RBP22.47■■□□□ 1.19
CLDN5-202ENST00000406028 GBP4Q96PP9 640 aa22.47■■□□□ 1.19
CLDN5-202ENST00000406028 AMOTL2Q9Y2J4 779 aa22.47■■□□□ 1.19
CLDN5-202ENST00000406028 CEP170BQ9Y4F5 1589 aaPredicted RBP22.46■■□□□ 1.19
CLDN5-202ENST00000406028 U2AF1L5P0DN76 240 aaPredicted RBP22.46■■□□□ 1.19
CLDN5-202ENST00000406028 U2AF1Q01081 240 aaKnown RBP eCLIP22.46■■□□□ 1.19
CLDN5-202ENST00000406028 CDC42BPGQ6DT37 1551 aa22.46■■□□□ 1.19
CLDN5-202ENST00000406028 SMC5Q8IY18 1101 aa22.46■■□□□ 1.19
CLDN5-202ENST00000406028 SNX21Q969T3 373 aa22.46■■□□□ 1.19
CLDN5-202ENST00000406028 PDCL3Q9H2J4 239 aa22.46■■□□□ 1.19
CLDN5-202ENST00000406028 IQSEC2Q5JU85 1478 aa22.45■■□□□ 1.18
CLDN5-202ENST00000406028 PTPRUQ92729 1446 aa22.45■■□□□ 1.18
CLDN5-202ENST00000406028 RBM25P49756 843 aaKnown RBP22.45■■□□□ 1.18
CLDN5-202ENST00000406028 SKOR2Q2VWA4 1001 aaPredicted RBP22.45■■□□□ 1.18
CLDN5-202ENST00000406028 HDAC1Q13547 482 aaPredicted RBP22.44■■□□□ 1.18
CLDN5-202ENST00000406028 RAB3GAP1Q15042 981 aa22.44■■□□□ 1.18
CLDN5-202ENST00000406028 NCBP3Q53F19 620 aaKnown RBP22.44■■□□□ 1.18
CLDN5-202ENST00000406028 KIAA1211Q6ZU35 1233 aa22.44■■□□□ 1.18
CLDN5-202ENST00000406028 PTCH1Q13635 1447 aa22.44■■□□□ 1.18
CLDN5-202ENST00000406028 CIZ1Q9ULV3 898 aaPredicted RBP22.43■■□□□ 1.18
CLDN5-202ENST00000406028 HSP90AB1P08238 724 aaKnown RBP22.42■■□□□ 1.18
CLDN5-202ENST00000406028 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.42■■□□□ 1.18
CLDN5-202ENST00000406028 CCDC27Q2M243 656 aa22.41■■□□□ 1.18
CLDN5-202ENST00000406028 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
CLDN5-202ENST00000406028 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
CLDN5-202ENST00000406028 PRR36Q9H6K5 1346 aa22.4■■□□□ 1.18
CLDN5-202ENST00000406028 PIK3R4Q99570 1358 aa22.4■■□□□ 1.18
CLDN5-202ENST00000406028 CCDC173Q0VFZ6 552 aa22.4■■□□□ 1.18
CLDN5-202ENST00000406028 ITSN1Q15811 1721 aa22.4■■□□□ 1.18
CLDN5-202ENST00000406028 COL3A1P02461 1466 aaPredicted RBP22.4■■□□□ 1.18
CLDN5-202ENST00000406028 PNPLA6Q8IY17 1366 aa22.4■■□□□ 1.18
CLDN5-202ENST00000406028 MON2Q7Z3U7 1717 aa22.39■■□□□ 1.17
CLDN5-202ENST00000406028 ADAMTSL3P82987 1691 aa22.39■■□□□ 1.17
CLDN5-202ENST00000406028 ITPRIPQ8IWB1 547 aa22.38■■□□□ 1.17
CLDN5-202ENST00000406028 COG3Q96JB2 828 aa22.38■■□□□ 1.17
CLDN5-202ENST00000406028 PPP1R9BQ96SB3 815 aa22.38■■□□□ 1.17
CLDN5-202ENST00000406028 NCKAP5LQ9HCH0 1330 aa22.38■■□□□ 1.17
CLDN5-202ENST00000406028 TRIM27P14373 513 aa22.38■■□□□ 1.17
CLDN5-202ENST00000406028 ANKLE2Q86XL3 938 aa22.38■■□□□ 1.17
CLDN5-202ENST00000406028 FOXD4L1Q9NU39 408 aa22.38■■□□□ 1.17
CLDN5-202ENST00000406028 AKAP12Q02952 1782 aa22.38■■□□□ 1.17
CLDN5-202ENST00000406028 PLEKHG3A1L390 1219 aa22.37■■□□□ 1.17
CLDN5-202ENST00000406028 PTMSP20962 102 aa22.37■■□□□ 1.17
CLDN5-202ENST00000406028 NASPP49321 788 aaPredicted RBP22.37■■□□□ 1.17
CLDN5-202ENST00000406028 ZSCAN30Q86W11 494 aa22.37■■□□□ 1.17
CLDN5-202ENST00000406028 NME9Q86XW9 330 aa22.37■■□□□ 1.17
CLDN5-202ENST00000406028 SMC4Q9NTJ3 1288 aa22.37■■□□□ 1.17
CLDN5-202ENST00000406028 DDX19BQ9UMR2 479 aa22.37■■□□□ 1.17
CLDN5-202ENST00000406028 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
CLDN5-202ENST00000406028 POLKQ9UBT6 870 aa22.35■■□□□ 1.17
CLDN5-202ENST00000406028 OFD1O75665 1012 aa22.34■■□□□ 1.17
CLDN5-202ENST00000406028 AATKQ6ZMQ8 1374 aa22.34■■□□□ 1.17
CLDN5-202ENST00000406028 ZNF142P52746 1687 aaPredicted RBP22.34■■□□□ 1.17
CLDN5-202ENST00000406028 CD2BP2O95400 341 aaKnown RBP22.34■■□□□ 1.17
CLDN5-202ENST00000406028 KIF2CQ99661 725 aa22.34■■□□□ 1.17
CLDN5-202ENST00000406028 TOPAZ1Q8N9V7 1692 aa22.34■■□□□ 1.17
CLDN5-202ENST00000406028 ACEP12821 1306 aa22.33■■□□□ 1.17
CLDN5-202ENST00000406028 XRN1Q8IZH2 1706 aaKnown RBP22.33■■□□□ 1.17
CLDN5-202ENST00000406028 ANP32BQ92688 251 aaKnown RBP22.33■■□□□ 1.17
CLDN5-202ENST00000406028 LNPKQ9C0E8 428 aa22.32■■□□□ 1.16
CLDN5-202ENST00000406028 SETD1BQ9UPS6 1966 aaKnown RBP22.32■■□□□ 1.16
CLDN5-202ENST00000406028 MSNP26038 577 aaKnown RBP22.32■■□□□ 1.16
CLDN5-202ENST00000406028 EXOSC9Q06265 439 aaKnown RBP22.31■■□□□ 1.16
CLDN5-202ENST00000406028 ATF7IPQ6VMQ6 1270 aa22.31■■□□□ 1.16
CLDN5-202ENST00000406028 SSH1Q8WYL5 1049 aa22.31■■□□□ 1.16
CLDN5-202ENST00000406028 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
CLDN5-202ENST00000406028 CT47B1P0C2W7 299 aaPredicted RBP22.31■■□□□ 1.16
CLDN5-202ENST00000406028 SSFA2P28290 1259 aa22.31■■□□□ 1.16
CLDN5-202ENST00000406028 NUCB1Q02818 461 aa22.31■■□□□ 1.16
CLDN5-202ENST00000406028 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
CLDN5-202ENST00000406028 TTC21BQ7Z4L5 1316 aa22.3■■□□□ 1.16
CLDN5-202ENST00000406028 RIPK4P57078 832 aa22.3■■□□□ 1.16
CLDN5-202ENST00000406028 RBM10P98175 930 aaKnown RBP22.3■■□□□ 1.16
CLDN5-202ENST00000406028 K7ELQ4 463 aaPredicted RBP22.29■■□□□ 1.16
CLDN5-202ENST00000406028 FCHSD2O94868 740 aa22.29■■□□□ 1.16
CLDN5-202ENST00000406028 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.29■■□□□ 1.16
CLDN5-202ENST00000406028 TMEM57Q8N5G2 664 aa22.29■■□□□ 1.16
CLDN5-202ENST00000406028 ZBTB40Q9NUA8 1239 aa22.29■■□□□ 1.16
CLDN5-202ENST00000406028 NOB1Q9ULX3 412 aaKnown RBP22.29■■□□□ 1.16
CLDN5-202ENST00000406028 DDX49Q9Y6V7 483 aaKnown RBP22.29■■□□□ 1.16
CLDN5-202ENST00000406028 GOLGA6L22H0YM25 854 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms