RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 HSPA1LP34931 641 aa12.12□□□□□ -0.47
TNFSF11-204ENST00000405262 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNFSF11-204ENST00000405262 HMGN5P82970 282 aaKnown RBP12.12□□□□□ -0.47
TNFSF11-204ENST00000405262 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
TNFSF11-204ENST00000405262 SLC26A8Q96RN1 970 aa12.11□□□□□ -0.47
TNFSF11-204ENST00000405262 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
TNFSF11-204ENST00000405262 COG6Q9Y2V7 657 aa12.11□□□□□ -0.47
TNFSF11-204ENST00000405262 NPC1L1Q9UHC9 1359 aa12.11□□□□□ -0.47
TNFSF11-204ENST00000405262 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
TNFSF11-204ENST00000405262 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
TNFSF11-204ENST00000405262 TMEM51Q9NW97 253 aa12.1□□□□□ -0.47
TNFSF11-204ENST00000405262 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
TNFSF11-204ENST00000405262 TMF1P82094 1093 aa12.09□□□□□ -0.47
TNFSF11-204ENST00000405262 TESK2Q96S53 571 aa12.09□□□□□ -0.47
TNFSF11-204ENST00000405262 RIMS2Q9UQ26 1411 aa12.09□□□□□ -0.47
TNFSF11-204ENST00000405262 PANK1Q8TE04 598 aa12.08□□□□□ -0.47
TNFSF11-204ENST00000405262 PCDHB15Q9Y5E8 787 aa12.08□□□□□ -0.47
TNFSF11-204ENST00000405262 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
TNFSF11-204ENST00000405262 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
TNFSF11-204ENST00000405262 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
TNFSF11-204ENST00000405262 PLEKHG1Q9ULL1 1385 aa12.07□□□□□ -0.48
TNFSF11-204ENST00000405262 KCNA6P17658 529 aa12.07□□□□□ -0.48
TNFSF11-204ENST00000405262 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
TNFSF11-204ENST00000405262 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
TNFSF11-204ENST00000405262 TMEM94Q12767 1356 aa12.06□□□□□ -0.48
TNFSF11-204ENST00000405262 BAG4O95429 457 aaKnown RBP12.06□□□□□ -0.48
TNFSF11-204ENST00000405262 KIAA2012Q0VF49 1180 aa12.06□□□□□ -0.48
TNFSF11-204ENST00000405262 NUTM2DQ5VT03 806 aaPredicted RBP12.06□□□□□ -0.48
TNFSF11-204ENST00000405262 ZSCAN23Q3MJ62 389 aa12.05□□□□□ -0.48
TNFSF11-204ENST00000405262 SPHKAPQ2M3C7 1700 aa12.05□□□□□ -0.48
TNFSF11-204ENST00000405262 ASXL1Q8IXJ9 1541 aa12.05□□□□□ -0.48
TNFSF11-204ENST00000405262 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
TNFSF11-204ENST00000405262 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
TNFSF11-204ENST00000405262 KNSTRNQ9Y448 316 aa12.05□□□□□ -0.48
TNFSF11-204ENST00000405262 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
TNFSF11-204ENST00000405262 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
TNFSF11-204ENST00000405262 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
TNFSF11-204ENST00000405262 PROSER2Q86WR7 435 aaPredicted RBP12.04□□□□□ -0.48
TNFSF11-204ENST00000405262 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
TNFSF11-204ENST00000405262 MED1Q15648 1581 aaPredicted RBP12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 APAF1O14727 1248 aa12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 NUCB2P80303 420 aa12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 SLC20A2Q08357 652 aa12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 KIF16BQ96L93 1317 aa12.03□□□□□ -0.48
TNFSF11-204ENST00000405262 SSFA2P28290 1259 aa12.02□□□□□ -0.49
TNFSF11-204ENST00000405262 HDGFP51858 240 aaKnown RBP12.02□□□□□ -0.49
TNFSF11-204ENST00000405262 CBX1P83916 185 aa12.02□□□□□ -0.49
TNFSF11-204ENST00000405262 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.02□□□□□ -0.49
TNFSF11-204ENST00000405262 FEZ1Q99689 392 aa12.02□□□□□ -0.49
TNFSF11-204ENST00000405262 ARID3AQ99856 593 aa12.02□□□□□ -0.49
TNFSF11-204ENST00000405262 LRSAM1Q6UWE0 723 aa12.01□□□□□ -0.49
TNFSF11-204ENST00000405262 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
TNFSF11-204ENST00000405262 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
TNFSF11-204ENST00000405262 MVPQ14764 893 aaKnown RBP12.01□□□□□ -0.49
TNFSF11-204ENST00000405262 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
TNFSF11-204ENST00000405262 GABPB1Q06547 395 aaPredicted RBP12□□□□□ -0.49
TNFSF11-204ENST00000405262 CDCA8Q53HL2 280 aa12□□□□□ -0.49
TNFSF11-204ENST00000405262 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
TNFSF11-204ENST00000405262 LMBRD1Q9NUN5 540 aa12□□□□□ -0.49
TNFSF11-204ENST00000405262 TRPM2O94759 1503 aa11.99□□□□□ -0.49
TNFSF11-204ENST00000405262 PRIM1P49642 420 aaKnown RBP11.99□□□□□ -0.49
TNFSF11-204ENST00000405262 ATP2B3Q16720 1220 aa11.99□□□□□ -0.49
TNFSF11-204ENST00000405262 NCBP3Q53F19 620 aaKnown RBP11.99□□□□□ -0.49
TNFSF11-204ENST00000405262 PIBF1Q8WXW3 757 aa11.99□□□□□ -0.49
TNFSF11-204ENST00000405262 CDK11BP21127 795 aaKnown RBP11.99□□□□□ -0.49
TNFSF11-204ENST00000405262 DIP2AQ14689 1571 aa11.99□□□□□ -0.49
TNFSF11-204ENST00000405262 NRXN3Q9Y4C0 1643 aa11.99□□□□□ -0.49
TNFSF11-204ENST00000405262 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
TNFSF11-204ENST00000405262 CYP2E1P05181 493 aaPredicted RBP11.98□□□□□ -0.49
TNFSF11-204ENST00000405262 RLBP1P12271 317 aa11.98□□□□□ -0.49
TNFSF11-204ENST00000405262 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
TNFSF11-204ENST00000405262 CCDC146Q8IYE0 955 aa11.98□□□□□ -0.49
TNFSF11-204ENST00000405262 PDCL2Q8N4E4 241 aa11.98□□□□□ -0.49
TNFSF11-204ENST00000405262 KIF2CQ99661 725 aa11.98□□□□□ -0.49
TNFSF11-204ENST00000405262 ROBO1Q9Y6N7 1651 aa11.98□□□□□ -0.49
TNFSF11-204ENST00000405262 MSH6P52701 1360 aa11.97□□□□□ -0.49
TNFSF11-204ENST00000405262 DNTTIP2Q5QJE6 756 aaKnown RBP11.97□□□□□ -0.49
TNFSF11-204ENST00000405262 WDR63Q8IWG1 891 aa11.97□□□□□ -0.49
TNFSF11-204ENST00000405262 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
TNFSF11-204ENST00000405262 SPTLC3Q9NUV7 552 aa11.97□□□□□ -0.49
TNFSF11-204ENST00000405262 PTPRUQ92729 1446 aa11.97□□□□□ -0.49
TNFSF11-204ENST00000405262 CT47B1P0C2W7 299 aaPredicted RBP11.96□□□□□ -0.49
TNFSF11-204ENST00000405262 ANKRD7Q92527 254 aa11.96□□□□□ -0.49
TNFSF11-204ENST00000405262 OGFRQ9NZT2 677 aa11.96□□□□□ -0.49
TNFSF11-204ENST00000405262 NEXMIFQ5QGS0 1516 aa11.96□□□□□ -0.49
TNFSF11-204ENST00000405262 SETBP1Q9Y6X0 1596 aa11.96□□□□□ -0.5
TNFSF11-204ENST00000405262 CCDC66A2RUB6 948 aa11.96□□□□□ -0.5
TNFSF11-204ENST00000405262 SOCS7O14512 581 aa11.96□□□□□ -0.5
TNFSF11-204ENST00000405262 MBD3O95983 291 aa11.96□□□□□ -0.5
TNFSF11-204ENST00000405262 BMP2KLQ5H9B9 411 aa11.96□□□□□ -0.5
TNFSF11-204ENST00000405262 MCTP1Q6DN14 999 aa11.96□□□□□ -0.5
TNFSF11-204ENST00000405262 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.96□□□□□ -0.5
TNFSF11-204ENST00000405262 PIK3R4Q99570 1358 aa11.96□□□□□ -0.5
TNFSF11-204ENST00000405262 PTMAP06454 111 aaKnown RBP11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 FAM193AP78312 1265 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms