RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 KCNH5Q8NCM2 988 aa21.72■■□□□ 1.07
TPM1-207ENST00000403994 TMC1Q8TDI8 760 aa21.72■■□□□ 1.07
TPM1-207ENST00000403994 USP47Q96K76 1375 aa21.72■■□□□ 1.07
TPM1-207ENST00000403994 NINLQ9Y2I6 1382 aa21.72■■□□□ 1.07
TPM1-207ENST00000403994 SOX12O15370 315 aa21.71■■□□□ 1.07
TPM1-207ENST00000403994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.71■■□□□ 1.07
TPM1-207ENST00000403994 PUS7Q96PZ0 661 aaKnown RBP21.71■■□□□ 1.07
TPM1-207ENST00000403994 HDGFL2Q7Z4V5 671 aaPredicted RBP21.7■■□□□ 1.06
TPM1-207ENST00000403994 NME9Q86XW9 330 aa21.7■■□□□ 1.06
TPM1-207ENST00000403994 SLC12A5Q9H2X9 1139 aa21.7■■□□□ 1.06
TPM1-207ENST00000403994 AXIN2Q9Y2T1 843 aa21.7■■□□□ 1.06
TPM1-207ENST00000403994 WDR17Q8IZU2 1322 aa21.7■■□□□ 1.06
TPM1-207ENST00000403994 OVOS2A0A0J9YW53 1432 aa21.7■■□□□ 1.06
TPM1-207ENST00000403994 OVOS2Q6IE36 1432 aa21.7■■□□□ 1.06
TPM1-207ENST00000403994 RREB1Q92766 1687 aa21.69■■□□□ 1.06
TPM1-207ENST00000403994 FAM196AQ6ZSG2 479 aa21.68■■□□□ 1.06
TPM1-207ENST00000403994 SBF2Q86WG5 1849 aa21.67■■□□□ 1.06
TPM1-207ENST00000403994 TERF2IPQ9NYB0 399 aa21.67■■□□□ 1.06
TPM1-207ENST00000403994 PDE3BQ13370 1112 aa21.66■■□□□ 1.06
TPM1-207ENST00000403994 TOM1L2Q6ZVM7 507 aa21.66■■□□□ 1.06
TPM1-207ENST00000403994 NUP188Q5SRE5 1749 aa21.66■■□□□ 1.06
TPM1-207ENST00000403994 MYOM1P52179 1685 aa21.66■■□□□ 1.06
TPM1-207ENST00000403994 LRP5O75197 1615 aa21.66■■□□□ 1.06
TPM1-207ENST00000403994 OVOS2A0A0G2JMS6 1433 aa21.65■■□□□ 1.06
TPM1-207ENST00000403994 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
TPM1-207ENST00000403994 TRIM37O94972 964 aa21.64■■□□□ 1.05
TPM1-207ENST00000403994 EN1Q05925 392 aaPredicted RBP21.64■■□□□ 1.05
TPM1-207ENST00000403994 RGPD3A6NKT7 1758 aaPredicted RBP21.64■■□□□ 1.05
TPM1-207ENST00000403994 RGPD4Q7Z3J3 1758 aa21.64■■□□□ 1.05
TPM1-207ENST00000403994 FAM208AQ9UK61 1670 aaKnown RBP21.62■■□□□ 1.05
TPM1-207ENST00000403994 KIF20BQ96Q89 1820 aa21.62■■□□□ 1.05
TPM1-207ENST00000403994 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
TPM1-207ENST00000403994 SLC24A1O60721 1099 aa21.61■■□□□ 1.05
TPM1-207ENST00000403994 PARD3Q8TEW0 1356 aa21.61■■□□□ 1.05
TPM1-207ENST00000403994 CSB-PGBD3P0DP91 1061 aa21.6■■□□□ 1.05
TPM1-207ENST00000403994 CARD10Q9BWT7 1032 aa21.6■■□□□ 1.05
TPM1-207ENST00000403994 CCDC7Q96M83 1385 aa21.6■■□□□ 1.05
TPM1-207ENST00000403994 ERBB3P21860 1342 aa21.59■■□□□ 1.05
TPM1-207ENST00000403994 TNS2Q63HR2 1409 aa21.59■■□□□ 1.05
TPM1-207ENST00000403994 PCGF6Q9BYE7 350 aa21.59■■□□□ 1.05
TPM1-207ENST00000403994 TIMELESSQ9UNS1 1208 aa21.59■■□□□ 1.05
TPM1-207ENST00000403994 TMF1P82094 1093 aa21.58■■□□□ 1.05
TPM1-207ENST00000403994 DDB1Q16531 1140 aa21.58■■□□□ 1.05
TPM1-207ENST00000403994 EZH2Q15910 746 aaKnown RBP21.57■■□□□ 1.04
TPM1-207ENST00000403994 CAMKK2Q96RR4 588 aa21.57■■□□□ 1.04
TPM1-207ENST00000403994 CDCA7Q9BWT1 371 aaPredicted RBP21.57■■□□□ 1.04
TPM1-207ENST00000403994 APBA3O96018 575 aa21.56■■□□□ 1.04
TPM1-207ENST00000403994 BCL9O00512 1426 aa21.55■■□□□ 1.04
TPM1-207ENST00000403994 PSDA5PKW4 1024 aaPredicted RBP21.55■■□□□ 1.04
TPM1-207ENST00000403994 C11orf95C9JLR9 678 aaPredicted RBP21.54■■□□□ 1.04
TPM1-207ENST00000403994 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
TPM1-207ENST00000403994 MARCH10Q8NA82 808 aaPredicted RBP21.52■■□□□ 1.04
TPM1-207ENST00000403994 ANKRD24Q8TF21 1146 aa21.51■■□□□ 1.03
TPM1-207ENST00000403994 COG3Q96JB2 828 aa21.51■■□□□ 1.03
TPM1-207ENST00000403994 RGPD2P0DJD1 1756 aa21.51■■□□□ 1.03
TPM1-207ENST00000403994 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
TPM1-207ENST00000403994 R3HDM1Q15032 1099 aaKnown RBP21.49■■□□□ 1.03
TPM1-207ENST00000403994 CDCA8Q53HL2 280 aa21.49■■□□□ 1.03
TPM1-207ENST00000403994 MAP3K19Q56UN5 1328 aa21.49■■□□□ 1.03
TPM1-207ENST00000403994 RTL1A6NKG5 1358 aa21.48■■□□□ 1.03
TPM1-207ENST00000403994 IP6K1Q92551 441 aa21.47■■□□□ 1.03
TPM1-207ENST00000403994 SHANK3Q9BYB0 1731 aa21.46■■□□□ 1.03
TPM1-207ENST00000403994 PTF1AQ7RTS3 328 aa21.46■■□□□ 1.03
TPM1-207ENST00000403994 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
TPM1-207ENST00000403994 BCL11BQ9C0K0 894 aaPredicted RBP21.45■■□□□ 1.02
TPM1-207ENST00000403994 ANKRD26Q9UPS8 1709 aa21.45■■□□□ 1.02
TPM1-207ENST00000403994 EXOC5O00471 708 aa21.44■■□□□ 1.02
TPM1-207ENST00000403994 FYB1O15117 783 aa21.44■■□□□ 1.02
TPM1-207ENST00000403994 IL2RBP14784 551 aa21.44■■□□□ 1.02
TPM1-207ENST00000403994 HOXC9P31274 260 aa21.44■■□□□ 1.02
TPM1-207ENST00000403994 GGNBP2Q9H3C7 697 aa21.44■■□□□ 1.02
TPM1-207ENST00000403994 BTAF1O14981 1849 aa21.43■■□□□ 1.02
TPM1-207ENST00000403994 FBLN1P23142 703 aa21.43■■□□□ 1.02
TPM1-207ENST00000403994 CCER1Q8TC90 406 aaPredicted RBP21.42■■□□□ 1.02
TPM1-207ENST00000403994 PLSCR1O15162 318 aa21.41■■□□□ 1.02
TPM1-207ENST00000403994 LTV1Q96GA3 475 aaPredicted RBP21.41■■□□□ 1.02
TPM1-207ENST00000403994 AMPHP49418 695 aa21.4■■□□□ 1.02
TPM1-207ENST00000403994 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
TPM1-207ENST00000403994 CASZ1Q86V15 1759 aa21.4■■□□□ 1.02
TPM1-207ENST00000403994 DOT1LQ8TEK3 1739 aa21.4■■□□□ 1.02
TPM1-207ENST00000403994 MEGF6O75095 1541 aa21.39■■□□□ 1.02
TPM1-207ENST00000403994 CARD14Q9BXL6 1004 aa21.39■■□□□ 1.01
TPM1-207ENST00000403994 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
TPM1-207ENST00000403994 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
TPM1-207ENST00000403994 NBPF14Q5TI25 921 aa21.37■■□□□ 1.01
TPM1-207ENST00000403994 FLT4P35916 1363 aa21.36■■□□□ 1.01
TPM1-207ENST00000403994 ANO8Q9HCE9 1232 aaPredicted RBP21.36■■□□□ 1.01
TPM1-207ENST00000403994 KCNQ2O43526 872 aa21.35■■□□□ 1.01
TPM1-207ENST00000403994 KIF24Q5T7B8 1368 aa21.35■■□□□ 1.01
TPM1-207ENST00000403994 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
TPM1-207ENST00000403994 ACSBG1Q96GR2 724 aa21.34■■□□□ 1.01
TPM1-207ENST00000403994 INSRP06213 1382 aa21.34■■□□□ 1.01
TPM1-207ENST00000403994 HSPA5P11021 654 aaKnown RBP21.33■■□□□ 1.01
TPM1-207ENST00000403994 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1.01
TPM1-207ENST00000403994 PROM2Q8N271 834 aa21.33■■□□□ 1.01
TPM1-207ENST00000403994 MAP2P11137 1827 aaKnown RBP21.32■■□□□ 1
TPM1-207ENST00000403994 PKD1L3Q7Z443 1732 aa21.31■■□□□ 1
TPM1-207ENST00000403994 CGNL1Q0VF96 1302 aa21.3■■□□□ 1
TPM1-207ENST00000403994 TXNRD1Q16881 649 aa21.3■■□□□ 1
TPM1-207ENST00000403994 NBPF6Q5VWK0 638 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms