RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 GCP02774 474 aa20.77■□□□□ 0.92
CHRFAM7A-203ENST00000401522 PNPLA6Q8IY17 1366 aa20.77■□□□□ 0.91
CHRFAM7A-203ENST00000401522 FBLN1P23142 703 aa20.76■□□□□ 0.91
CHRFAM7A-203ENST00000401522 HSPA1LP34931 641 aa20.76■□□□□ 0.91
CHRFAM7A-203ENST00000401522 CRYBG1Q9Y4K1 1723 aa20.76■□□□□ 0.91
CHRFAM7A-203ENST00000401522 COL22A1Q8NFW1 1626 aaPredicted RBP20.76■□□□□ 0.91
CHRFAM7A-203ENST00000401522 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
CHRFAM7A-203ENST00000401522 CRBNQ96SW2 442 aa20.74■□□□□ 0.91
CHRFAM7A-203ENST00000401522 POLKQ9UBT6 870 aa20.74■□□□□ 0.91
CHRFAM7A-203ENST00000401522 NFAT5O94916 1531 aa20.74■□□□□ 0.91
CHRFAM7A-203ENST00000401522 PLIN1O60240 522 aa20.74■□□□□ 0.91
CHRFAM7A-203ENST00000401522 SOX12O15370 315 aa20.73■□□□□ 0.91
CHRFAM7A-203ENST00000401522 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
CHRFAM7A-203ENST00000401522 DUSP27Q5VZP5 1158 aa20.73■□□□□ 0.91
CHRFAM7A-203ENST00000401522 FBXO41Q8TF61 875 aa20.73■□□□□ 0.91
CHRFAM7A-203ENST00000401522 PHRF1Q9P1Y6 1649 aaKnown RBP20.73■□□□□ 0.91
CHRFAM7A-203ENST00000401522 MAP2P11137 1827 aaKnown RBP20.73■□□□□ 0.91
CHRFAM7A-203ENST00000401522 MTHFSP49914 203 aa20.72■□□□□ 0.91
CHRFAM7A-203ENST00000401522 JCADQ9P266 1359 aa20.72■□□□□ 0.91
CHRFAM7A-203ENST00000401522 PLEKHG5O94827 1062 aa20.72■□□□□ 0.91
CHRFAM7A-203ENST00000401522 RRS1Q15050 365 aaKnown RBP20.71■□□□□ 0.91
CHRFAM7A-203ENST00000401522 SHPRHQ149N8 1683 aa20.71■□□□□ 0.91
CHRFAM7A-203ENST00000401522 MAP3K19Q56UN5 1328 aa20.7■□□□□ 0.9
CHRFAM7A-203ENST00000401522 ARHGEF25Q86VW2 580 aa20.7■□□□□ 0.9
CHRFAM7A-203ENST00000401522 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
CHRFAM7A-203ENST00000401522 ABCA3Q99758 1704 aa20.69■□□□□ 0.9
CHRFAM7A-203ENST00000401522 PDE4AP27815 886 aa20.69■□□□□ 0.9
CHRFAM7A-203ENST00000401522 NGEFQ8N5V2 710 aa20.69■□□□□ 0.9
CHRFAM7A-203ENST00000401522 ZBTB47Q9UFB7 747 aaPredicted RBP20.69■□□□□ 0.9
CHRFAM7A-203ENST00000401522 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
CHRFAM7A-203ENST00000401522 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.68■□□□□ 0.9
CHRFAM7A-203ENST00000401522 CPDO75976 1380 aa20.68■□□□□ 0.9
CHRFAM7A-203ENST00000401522 BACH2Q9BYV9 841 aa20.68■□□□□ 0.9
CHRFAM7A-203ENST00000401522 HAP1P54257 671 aaPredicted RBP20.67■□□□□ 0.9
CHRFAM7A-203ENST00000401522 ZC3H6P61129 1189 aaKnown RBP20.67■□□□□ 0.9
CHRFAM7A-203ENST00000401522 SLFN5Q08AF3 891 aa20.67■□□□□ 0.9
CHRFAM7A-203ENST00000401522 PPM1GO15355 546 aaPredicted RBP20.66■□□□□ 0.9
CHRFAM7A-203ENST00000401522 TRMT2AQ8IZ69 625 aaKnown RBP20.66■□□□□ 0.9
CHRFAM7A-203ENST00000401522 LTN1O94822 1766 aa20.66■□□□□ 0.9
CHRFAM7A-203ENST00000401522 CDK12Q9NYV4 1490 aaPredicted RBP20.65■□□□□ 0.9
CHRFAM7A-203ENST00000401522 AMPHP49418 695 aa20.65■□□□□ 0.9
CHRFAM7A-203ENST00000401522 PEAK1Q9H792 1746 aa20.64■□□□□ 0.9
CHRFAM7A-203ENST00000401522 SPATA31A6Q5VVP1 1343 aa20.64■□□□□ 0.9
CHRFAM7A-203ENST00000401522 RTL1A6NKG5 1358 aa20.64■□□□□ 0.9
CHRFAM7A-203ENST00000401522 FLT4P35916 1363 aa20.64■□□□□ 0.9
CHRFAM7A-203ENST00000401522 KIAA0232Q92628 1395 aa20.64■□□□□ 0.9
CHRFAM7A-203ENST00000401522 IP6K1Q92551 441 aa20.64■□□□□ 0.89
CHRFAM7A-203ENST00000401522 CFAP53Q96M91 514 aa20.64■□□□□ 0.89
CHRFAM7A-203ENST00000401522 C20orf194Q5TEA3 1177 aa20.63■□□□□ 0.89
CHRFAM7A-203ENST00000401522 HOXC9P31274 260 aa20.63■□□□□ 0.89
CHRFAM7A-203ENST00000401522 KDM2BQ8NHM5 1336 aa20.62■□□□□ 0.89
CHRFAM7A-203ENST00000401522 HSP90AB2PQ58FF8 381 aa20.62■□□□□ 0.89
CHRFAM7A-203ENST00000401522 CENPQQ7L2Z9 268 aaPredicted RBP20.62■□□□□ 0.89
CHRFAM7A-203ENST00000401522 PRDM11Q9NQV5 511 aa20.61■□□□□ 0.89
CHRFAM7A-203ENST00000401522 ABCC6O95255 1503 aa20.61■□□□□ 0.89
CHRFAM7A-203ENST00000401522 CCDC146Q8IYE0 955 aa20.61■□□□□ 0.89
CHRFAM7A-203ENST00000401522 COL3A1P02461 1466 aaPredicted RBP20.6■□□□□ 0.89
CHRFAM7A-203ENST00000401522 ZBTB7CA1YPR0 619 aa20.6■□□□□ 0.89
CHRFAM7A-203ENST00000401522 E9PSI1 815 aa20.6■□□□□ 0.89
CHRFAM7A-203ENST00000401522 APAF1O14727 1248 aa20.6■□□□□ 0.89
CHRFAM7A-203ENST00000401522 COL18A1P39060 1754 aa20.6■□□□□ 0.89
CHRFAM7A-203ENST00000401522 FAM83GA6ND36 823 aa20.59■□□□□ 0.89
CHRFAM7A-203ENST00000401522 NUTM2BA6NNL0 878 aaPredicted RBP20.59■□□□□ 0.89
CHRFAM7A-203ENST00000401522 NUTM2EB1AL46 878 aaPredicted RBP20.59■□□□□ 0.89
CHRFAM7A-203ENST00000401522 NUTM2AQ8IVF1 878 aaPredicted RBP20.59■□□□□ 0.89
CHRFAM7A-203ENST00000401522 AXIN2Q9Y2T1 843 aa20.59■□□□□ 0.89
CHRFAM7A-203ENST00000401522 CHRNA2Q15822 529 aa20.59■□□□□ 0.89
CHRFAM7A-203ENST00000401522 DIAPH1O60610 1272 aaKnown RBP20.58■□□□□ 0.88
CHRFAM7A-203ENST00000401522 ADAMTS2O95450 1211 aa20.57■□□□□ 0.88
CHRFAM7A-203ENST00000401522 IL13P35225 146 aa20.57■□□□□ 0.88
CHRFAM7A-203ENST00000401522 NPM2Q86SE8 214 aaKnown RBP20.56■□□□□ 0.88
CHRFAM7A-203ENST00000401522 LMO7Q8WWI1 1683 aa20.55■□□□□ 0.88
CHRFAM7A-203ENST00000401522 EIF4A2Q14240 407 aaKnown RBP20.55■□□□□ 0.88
CHRFAM7A-203ENST00000401522 COL14A1Q05707 1796 aaKnown RBP20.55■□□□□ 0.88
CHRFAM7A-203ENST00000401522 LRP6O75581 1613 aa20.54■□□□□ 0.88
CHRFAM7A-203ENST00000401522 CAMTA1Q9Y6Y1 1673 aa20.53■□□□□ 0.88
CHRFAM7A-203ENST00000401522 NBR1Q14596 966 aa20.53■□□□□ 0.88
CHRFAM7A-203ENST00000401522 RGPD5Q99666 1765 aa20.53■□□□□ 0.88
CHRFAM7A-203ENST00000401522 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
CHRFAM7A-203ENST00000401522 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
CHRFAM7A-203ENST00000401522 ERBB3P21860 1342 aa20.52■□□□□ 0.88
CHRFAM7A-203ENST00000401522 ANKRD24Q8TF21 1146 aa20.52■□□□□ 0.88
CHRFAM7A-203ENST00000401522 LTV1Q96GA3 475 aaPredicted RBP20.51■□□□□ 0.87
CHRFAM7A-203ENST00000401522 DDRGK1Q96HY6 314 aa20.51■□□□□ 0.87
CHRFAM7A-203ENST00000401522 BTG4Q9NY30 223 aa20.51■□□□□ 0.87
CHRFAM7A-203ENST00000401522 DEKP35659 375 aaKnown RBP20.5■□□□□ 0.87
CHRFAM7A-203ENST00000401522 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
CHRFAM7A-203ENST00000401522 U2SURPO15042 1029 aaKnown RBP20.49■□□□□ 0.87
CHRFAM7A-203ENST00000401522 RTL5Q5HYW3 569 aaPredicted RBP20.49■□□□□ 0.87
CHRFAM7A-203ENST00000401522 EYA1Q99502 592 aa20.48■□□□□ 0.87
CHRFAM7A-203ENST00000401522 RGPD1P0DJD0 1748 aa20.48■□□□□ 0.87
CHRFAM7A-203ENST00000401522 SLIT2O94813 1529 aa20.48■□□□□ 0.87
CHRFAM7A-203ENST00000401522 U2AF1L5P0DN76 240 aaPredicted RBP20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 U2AF1Q01081 240 aaKnown RBP eCLIP20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 NGLY1Q96IV0 654 aa20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 C8orf37Q96NL8 207 aa20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 PLCH1Q4KWH8 1693 aa20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 FNBP4Q8N3X1 1017 aaPredicted RBP20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 RUNDC1Q96C34 613 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms