RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 ADGRF5Q8IZF2 1346 aa13.51□□□□□ -0.25
PRAMEF1-202ENST00000400814 A2ML1A8K2U0 1454 aa13.51□□□□□ -0.25
PRAMEF1-202ENST00000400814 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
PRAMEF1-202ENST00000400814 NBPF1Q3BBV0 1214 aa13.5□□□□□ -0.25
PRAMEF1-202ENST00000400814 CCDC82Q8N4S0 544 aa13.5□□□□□ -0.25
PRAMEF1-202ENST00000400814 POLR3EQ9NVU0 708 aa13.5□□□□□ -0.25
PRAMEF1-202ENST00000400814 NLRP1Q9C000 1473 aa13.5□□□□□ -0.25
PRAMEF1-202ENST00000400814 NEXMIFQ5QGS0 1516 aa13.5□□□□□ -0.25
PRAMEF1-202ENST00000400814 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
PRAMEF1-202ENST00000400814 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
PRAMEF1-202ENST00000400814 CERKQ8TCT0 537 aa13.49□□□□□ -0.25
PRAMEF1-202ENST00000400814 NLRP7Q8WX94 980 aa13.49□□□□□ -0.25
PRAMEF1-202ENST00000400814 KIAA1210Q9ULL0 1709 aa13.49□□□□□ -0.25
PRAMEF1-202ENST00000400814 RIMS1Q86UR5 1692 aaKnown RBP13.48□□□□□ -0.25
PRAMEF1-202ENST00000400814 KDM4FA0A1W2PPD8 638 aa13.48□□□□□ -0.25
PRAMEF1-202ENST00000400814 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
PRAMEF1-202ENST00000400814 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
PRAMEF1-202ENST00000400814 CARD11Q9BXL7 1154 aa13.48□□□□□ -0.25
PRAMEF1-202ENST00000400814 ADGRG1Q9Y653 693 aa13.48□□□□□ -0.25
PRAMEF1-202ENST00000400814 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
PRAMEF1-202ENST00000400814 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRAMEF1-202ENST00000400814 METRNQ9UJH8 293 aa13.47□□□□□ -0.25
PRAMEF1-202ENST00000400814 LAMC1P11047 1609 aa13.47□□□□□ -0.25
PRAMEF1-202ENST00000400814 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
PRAMEF1-202ENST00000400814 C6orf132Q5T0Z8 1188 aa13.46□□□□□ -0.25
PRAMEF1-202ENST00000400814 MYSM1Q5VVJ2 828 aa13.46□□□□□ -0.25
PRAMEF1-202ENST00000400814 PROSER2Q86WR7 435 aaPredicted RBP13.46□□□□□ -0.25
PRAMEF1-202ENST00000400814 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.25
PRAMEF1-202ENST00000400814 FOSBP53539 338 aa13.45□□□□□ -0.26
PRAMEF1-202ENST00000400814 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
PRAMEF1-202ENST00000400814 HIRIP3Q9BW71 556 aaPredicted RBP13.45□□□□□ -0.26
PRAMEF1-202ENST00000400814 UBR1Q8IWV7 1749 aa13.45□□□□□ -0.26
PRAMEF1-202ENST00000400814 USP47Q96K76 1375 aa13.45□□□□□ -0.26
PRAMEF1-202ENST00000400814 TTC13Q8NBP0 860 aa13.44□□□□□ -0.26
PRAMEF1-202ENST00000400814 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRAMEF1-202ENST00000400814 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
PRAMEF1-202ENST00000400814 SETD1BQ9UPS6 1966 aaKnown RBP13.44□□□□□ -0.26
PRAMEF1-202ENST00000400814 HDGFP51858 240 aaKnown RBP13.43□□□□□ -0.26
PRAMEF1-202ENST00000400814 FNBP4Q8N3X1 1017 aaPredicted RBP13.43□□□□□ -0.26
PRAMEF1-202ENST00000400814 POM121Q96HA1 1249 aa13.43□□□□□ -0.26
PRAMEF1-202ENST00000400814 RAD21O60216 631 aa13.42□□□□□ -0.26
PRAMEF1-202ENST00000400814 NUTM2DQ5VT03 806 aaPredicted RBP13.42□□□□□ -0.26
PRAMEF1-202ENST00000400814 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.42□□□□□ -0.26
PRAMEF1-202ENST00000400814 RBM27Q9P2N5 1060 aaKnown RBP13.42□□□□□ -0.26
PRAMEF1-202ENST00000400814 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
PRAMEF1-202ENST00000400814 PTPRMP28827 1452 aa13.42□□□□□ -0.26
PRAMEF1-202ENST00000400814 CLK2P49760 499 aaKnown RBP13.41□□□□□ -0.26
PRAMEF1-202ENST00000400814 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
PRAMEF1-202ENST00000400814 ST20-MTHFSA0A0A6YYL1 179 aa13.4□□□□□ -0.26
PRAMEF1-202ENST00000400814 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
PRAMEF1-202ENST00000400814 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.26
PRAMEF1-202ENST00000400814 ZDHHC16Q969W1 377 aa13.4□□□□□ -0.26
PRAMEF1-202ENST00000400814 TBC1D2Q9BYX2 928 aa13.4□□□□□ -0.26
PRAMEF1-202ENST00000400814 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
PRAMEF1-202ENST00000400814 MYO3AQ8NEV4 1616 aa13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 SLIT1O75093 1534 aa13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 C11orf95C9JLR9 678 aaPredicted RBP13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 ZNF454Q8N9F8 522 aa13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
PRAMEF1-202ENST00000400814 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
PRAMEF1-202ENST00000400814 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
PRAMEF1-202ENST00000400814 LTKP29376 864 aa13.37□□□□□ -0.27
PRAMEF1-202ENST00000400814 PRSS12P56730 875 aa13.37□□□□□ -0.27
PRAMEF1-202ENST00000400814 RBM46Q8TBY0 533 aaKnown RBP13.37□□□□□ -0.27
PRAMEF1-202ENST00000400814 TESK2Q96S53 571 aa13.37□□□□□ -0.27
PRAMEF1-202ENST00000400814 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
PRAMEF1-202ENST00000400814 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
PRAMEF1-202ENST00000400814 RFC5P40937 340 aa13.36□□□□□ -0.27
PRAMEF1-202ENST00000400814 TMEM132EQ6IEE7 984 aa13.36□□□□□ -0.27
PRAMEF1-202ENST00000400814 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
PRAMEF1-202ENST00000400814 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
PRAMEF1-202ENST00000400814 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
PRAMEF1-202ENST00000400814 ADAM33Q9BZ11 813 aa13.35□□□□□ -0.27
PRAMEF1-202ENST00000400814 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
PRAMEF1-202ENST00000400814 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
PRAMEF1-202ENST00000400814 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
PRAMEF1-202ENST00000400814 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
PRAMEF1-202ENST00000400814 SNRKQ9NRH2 765 aa13.34□□□□□ -0.27
PRAMEF1-202ENST00000400814 SERPINA10Q9UK55 444 aa13.34□□□□□ -0.27
PRAMEF1-202ENST00000400814 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.27
PRAMEF1-202ENST00000400814 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.27
PRAMEF1-202ENST00000400814 ASXL1Q8IXJ9 1541 aa13.33□□□□□ -0.28
PRAMEF1-202ENST00000400814 EIF3AQ14152 1382 aaKnown RBP13.33□□□□□ -0.28
PRAMEF1-202ENST00000400814 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.28
PRAMEF1-202ENST00000400814 SETD1AO15047 1707 aaKnown RBP13.32□□□□□ -0.28
PRAMEF1-202ENST00000400814 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
PRAMEF1-202ENST00000400814 DDX10Q13206 875 aaKnown RBP13.32□□□□□ -0.28
PRAMEF1-202ENST00000400814 TMEM259Q4ZIN3 620 aa13.32□□□□□ -0.28
PRAMEF1-202ENST00000400814 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
PRAMEF1-202ENST00000400814 LIMD1Q9UGP4 676 aa13.32□□□□□ -0.28
PRAMEF1-202ENST00000400814 MED14O60244 1454 aa13.32□□□□□ -0.28
PRAMEF1-202ENST00000400814 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
PRAMEF1-202ENST00000400814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
PRAMEF1-202ENST00000400814 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
PRAMEF1-202ENST00000400814 CCDC97Q96F63 343 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms