RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 WASF2Q9Y6W5 498 aa9.54□□□□□ -0.88
SAMSN1-202ENST00000400564 MPNDQ8N594 471 aa9.53□□□□□ -0.88
SAMSN1-202ENST00000400564 ADH1CP00326 375 aa9.52□□□□□ -0.88
SAMSN1-202ENST00000400564 GRM5P41594 1212 aa9.52□□□□□ -0.88
SAMSN1-202ENST00000400564 VASH1Q7L8A9 365 aaPredicted RBP9.52□□□□□ -0.88
SAMSN1-202ENST00000400564 SLC10A4Q96EP9 437 aa9.52□□□□□ -0.88
SAMSN1-202ENST00000400564 PRM3Q9NNZ6 103 aa9.52□□□□□ -0.88
SAMSN1-202ENST00000400564 UBTFP17480 764 aaKnown RBP9.51□□□□□ -0.89
SAMSN1-202ENST00000400564 NR1H3Q13133 447 aa9.51□□□□□ -0.89
SAMSN1-202ENST00000400564 TERTO14746 1132 aaKnown RBP9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 NR3C2P08235 984 aa9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 FSHRP23945 695 aa9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 NNTQ13423 1086 aa9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 SENP2Q9HC62 589 aa9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 MAP4K5Q9Y4K4 846 aa9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 VAC14Q08AM6 782 aa9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 DZIP3Q86Y13 1208 aaKnown RBP9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
SAMSN1-202ENST00000400564 KCTD15Q96SI1 283 aaPredicted RBP9.49□□□□□ -0.89
SAMSN1-202ENST00000400564 ATP13A2Q9NQ11 1180 aa9.48□□□□□ -0.89
SAMSN1-202ENST00000400564 NR5A1Q13285 461 aa9.47□□□□□ -0.89
SAMSN1-202ENST00000400564 TRIM47Q96LD4 638 aa9.47□□□□□ -0.89
SAMSN1-202ENST00000400564 RAB15P59190 212 aa9.46□□□□□ -0.9
SAMSN1-202ENST00000400564 INTS6LQ5JSJ4 861 aaKnown RBP9.46□□□□□ -0.9
SAMSN1-202ENST00000400564 KIFC2Q96AC6 838 aa9.46□□□□□ -0.9
SAMSN1-202ENST00000400564 GTF3C3Q9Y5Q9 886 aa9.46□□□□□ -0.9
SAMSN1-202ENST00000400564 RAD21O60216 631 aa9.45□□□□□ -0.9
SAMSN1-202ENST00000400564 CDV3Q9UKY7 258 aaKnown RBP9.45□□□□□ -0.9
SAMSN1-202ENST00000400564 LOC100996750A0A140TA64 210 aa9.44□□□□□ -0.9
SAMSN1-202ENST00000400564 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
SAMSN1-202ENST00000400564 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
SAMSN1-202ENST00000400564 TIMP2P16035 220 aa9.44□□□□□ -0.9
SAMSN1-202ENST00000400564 WDR4P57081 412 aaKnown RBP9.44□□□□□ -0.9
SAMSN1-202ENST00000400564 KLF16Q9BXK1 252 aaPredicted RBP9.44□□□□□ -0.9
SAMSN1-202ENST00000400564 KRTAP4-6Q9BYQ5 205 aa9.44□□□□□ -0.9
SAMSN1-202ENST00000400564 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
SAMSN1-202ENST00000400564 NBPF20Q3BBV1 942 aa9.43□□□□□ -0.9
SAMSN1-202ENST00000400564 CCDC116Q8IYX3 515 aa9.43□□□□□ -0.9
SAMSN1-202ENST00000400564 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
SAMSN1-202ENST00000400564 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
SAMSN1-202ENST00000400564 ESPNB1AK53 854 aa9.42□□□□□ -0.9
SAMSN1-202ENST00000400564 CAPN5O15484 640 aaPredicted RBP9.42□□□□□ -0.9
SAMSN1-202ENST00000400564 ZIC2O95409 532 aaPredicted RBP9.42□□□□□ -0.9
SAMSN1-202ENST00000400564 LCE2CQ5TA81 110 aa9.42□□□□□ -0.9
SAMSN1-202ENST00000400564 ZNF330Q9Y3S2 320 aaPredicted RBP9.42□□□□□ -0.9
SAMSN1-202ENST00000400564 WASHC4Q2M389 1173 aa9.41□□□□□ -0.9
SAMSN1-202ENST00000400564 PPP1R26Q5T8A7 1209 aaPredicted RBP9.41□□□□□ -0.9
SAMSN1-202ENST00000400564 TMPRSS4Q9NRS4 437 aa9.41□□□□□ -0.9
SAMSN1-202ENST00000400564 POM121CA8CG34 1229 aa9.4□□□□□ -0.9
SAMSN1-202ENST00000400564 BMP1P13497 986 aa9.39□□□□□ -0.91
SAMSN1-202ENST00000400564 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
SAMSN1-202ENST00000400564 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
SAMSN1-202ENST00000400564 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
SAMSN1-202ENST00000400564 FNBP4Q8N3X1 1017 aaPredicted RBP9.38□□□□□ -0.91
SAMSN1-202ENST00000400564 CEP126Q9P2H0 1117 aa9.38□□□□□ -0.91
SAMSN1-202ENST00000400564 EMILIN1Q9Y6C2 1016 aa9.38□□□□□ -0.91
SAMSN1-202ENST00000400564 CBLBQ13191 982 aa9.37□□□□□ -0.91
SAMSN1-202ENST00000400564 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
SAMSN1-202ENST00000400564 ZSCAN1Q8NBB4 408 aa9.37□□□□□ -0.91
SAMSN1-202ENST00000400564 ZNF784Q8NCA9 323 aaPredicted RBP9.37□□□□□ -0.91
SAMSN1-202ENST00000400564 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
SAMSN1-202ENST00000400564 DHX9Q08211 1270 aaKnown RBP9.36□□□□□ -0.91
SAMSN1-202ENST00000400564 TRIM46Q7Z4K8 759 aa9.36□□□□□ -0.91
SAMSN1-202ENST00000400564 A6NJR5 290 aa9.35□□□□□ -0.91
SAMSN1-202ENST00000400564 SEMA3FQ13275 785 aa9.35□□□□□ -0.91
SAMSN1-202ENST00000400564 SEPT12Q8IYM1 358 aa9.35□□□□□ -0.91
SAMSN1-202ENST00000400564 ADAMTS19Q8TE59 1207 aa9.35□□□□□ -0.91
SAMSN1-202ENST00000400564 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
SAMSN1-202ENST00000400564 PGPEP1Q9NXJ5 209 aa9.35□□□□□ -0.91
SAMSN1-202ENST00000400564 TSGA10IPQ3SY00 556 aa9.34□□□□□ -0.91
SAMSN1-202ENST00000400564 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
SAMSN1-202ENST00000400564 ALG2Q9H553 416 aa9.34□□□□□ -0.91
SAMSN1-202ENST00000400564 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
SAMSN1-202ENST00000400564 ADD1P35611 737 aaKnown RBP9.33□□□□□ -0.92
SAMSN1-202ENST00000400564 PHTF2Q8N3S3 785 aa9.33□□□□□ -0.92
SAMSN1-202ENST00000400564 MEIOBQ8N635 442 aa9.33□□□□□ -0.92
SAMSN1-202ENST00000400564 IRF7Q92985 503 aa9.33□□□□□ -0.92
SAMSN1-202ENST00000400564 PCDHB11Q9Y5F2 797 aa9.33□□□□□ -0.92
SAMSN1-202ENST00000400564 PIK3CDO00329 1044 aa9.32□□□□□ -0.92
SAMSN1-202ENST00000400564 LILRA1O75019 489 aa9.32□□□□□ -0.92
SAMSN1-202ENST00000400564 SOX11P35716 441 aa9.32□□□□□ -0.92
SAMSN1-202ENST00000400564 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
SAMSN1-202ENST00000400564 MRPL14Q6P1L8 145 aaKnown RBP9.32□□□□□ -0.92
SAMSN1-202ENST00000400564 CDCA7Q9BWT1 371 aaPredicted RBP9.32□□□□□ -0.92
SAMSN1-202ENST00000400564 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
SAMSN1-202ENST00000400564 GMPRP36959 345 aa9.31□□□□□ -0.92
SAMSN1-202ENST00000400564 SCTRP47872 440 aa9.31□□□□□ -0.92
SAMSN1-202ENST00000400564 SLFNL1Q499Z3 407 aa9.31□□□□□ -0.92
SAMSN1-202ENST00000400564 NPAS3Q8IXF0 933 aa9.31□□□□□ -0.92
SAMSN1-202ENST00000400564 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
SAMSN1-202ENST00000400564 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
SAMSN1-202ENST00000400564 C6orf118Q5T5N4 469 aa9.3□□□□□ -0.92
SAMSN1-202ENST00000400564 HDGFL1Q5TGJ6 251 aa9.3□□□□□ -0.92
SAMSN1-202ENST00000400564 Q6ZVU0 165 aa9.3□□□□□ -0.92
SAMSN1-202ENST00000400564 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
SAMSN1-202ENST00000400564 ZFP42Q96MM3 310 aa9.3□□□□□ -0.92
SAMSN1-202ENST00000400564 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
SAMSN1-202ENST00000400564 TRAK2O60296 914 aa9.28□□□□□ -0.92
SAMSN1-202ENST00000400564 ERVK-9P63128 1117 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms