RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 RRS1Q15050 365 aaKnown RBP9.16□□□□□ -0.94
USP16-203ENST00000399975 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
USP16-203ENST00000399975 NRAPQ86VF7 1730 aa9.16□□□□□ -0.94
USP16-203ENST00000399975 NUDCQ9Y266 331 aa9.16□□□□□ -0.94
USP16-203ENST00000399975 PLCH1Q4KWH8 1693 aa9.16□□□□□ -0.94
USP16-203ENST00000399975 CNGB1Q14028 1251 aaPredicted RBP9.15□□□□□ -0.94
USP16-203ENST00000399975 PIP4K2BP78356 416 aa9.15□□□□□ -0.94
USP16-203ENST00000399975 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.15□□□□□ -0.94
USP16-203ENST00000399975 SPATA31A6Q5VVP1 1343 aa9.15□□□□□ -0.95
USP16-203ENST00000399975 FBLN1P23142 703 aa9.15□□□□□ -0.95
USP16-203ENST00000399975 KDRP35968 1356 aa9.14□□□□□ -0.95
USP16-203ENST00000399975 RGPD2P0DJD1 1756 aa9.14□□□□□ -0.95
USP16-203ENST00000399975 AMPHP49418 695 aa9.14□□□□□ -0.95
USP16-203ENST00000399975 EIF4A2Q14240 407 aaKnown RBP9.14□□□□□ -0.95
USP16-203ENST00000399975 WDR43Q15061 677 aaKnown RBP eCLIP9.14□□□□□ -0.95
USP16-203ENST00000399975 NGEFQ8N5V2 710 aa9.14□□□□□ -0.95
USP16-203ENST00000399975 PNNQ9H307 717 aaKnown RBP9.14□□□□□ -0.95
USP16-203ENST00000399975 IGSF1Q8N6C5 1336 aa9.14□□□□□ -0.95
USP16-203ENST00000399975 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
USP16-203ENST00000399975 KIAA0232Q92628 1395 aa9.13□□□□□ -0.95
USP16-203ENST00000399975 WNK3Q9BYP7 1800 aa9.13□□□□□ -0.95
USP16-203ENST00000399975 FCHSD2O94868 740 aa9.13□□□□□ -0.95
USP16-203ENST00000399975 HSP90AB2PQ58FF8 381 aa9.13□□□□□ -0.95
USP16-203ENST00000399975 ADAMTS8Q9UP79 889 aa9.13□□□□□ -0.95
USP16-203ENST00000399975 COL5A2P05997 1499 aaPredicted RBP9.12□□□□□ -0.95
USP16-203ENST00000399975 PLEKHF1Q96S99 279 aa9.12□□□□□ -0.95
USP16-203ENST00000399975 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
USP16-203ENST00000399975 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
USP16-203ENST00000399975 SLIT2O94813 1529 aa9.11□□□□□ -0.95
USP16-203ENST00000399975 RUNDC1Q96C34 613 aa9.11□□□□□ -0.95
USP16-203ENST00000399975 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
USP16-203ENST00000399975 PKD1L3Q7Z443 1732 aa9.11□□□□□ -0.95
USP16-203ENST00000399975 PARP4Q9UKK3 1724 aaKnown RBP9.11□□□□□ -0.95
USP16-203ENST00000399975 FAM9BQ8IZU0 186 aa9.11□□□□□ -0.95
USP16-203ENST00000399975 ERBB3P21860 1342 aa9.11□□□□□ -0.95
USP16-203ENST00000399975 AXIN2Q9Y2T1 843 aa9.1□□□□□ -0.95
USP16-203ENST00000399975 PPM1GO15355 546 aaPredicted RBP9.1□□□□□ -0.95
USP16-203ENST00000399975 HSPA1LP34931 641 aa9.1□□□□□ -0.95
USP16-203ENST00000399975 ZC3H6P61129 1189 aaKnown RBP9.1□□□□□ -0.95
USP16-203ENST00000399975 FAM83GA6ND36 823 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 ANKRD24Q8TF21 1146 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 EYA1Q99502 592 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 LRP6O75581 1613 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 SOX12O15370 315 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 U2AF1L5P0DN76 240 aaPredicted RBP9.09□□□□□ -0.95
USP16-203ENST00000399975 U2AF1Q01081 240 aaKnown RBP eCLIP9.09□□□□□ -0.95
USP16-203ENST00000399975 DLG5Q8TDM6 1919 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 CCDC27Q2M243 656 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 FBXO41Q8TF61 875 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 PRDM11Q9NQV5 511 aa9.09□□□□□ -0.95
USP16-203ENST00000399975 ADAMTS7Q9UKP4 1686 aa9.09□□□□□ -0.96
USP16-203ENST00000399975 ZBED9Q6R2W3 1325 aa9.09□□□□□ -0.96
USP16-203ENST00000399975 WDR17Q8IZU2 1322 aa9.09□□□□□ -0.96
USP16-203ENST00000399975 PHF23Q9BUL5 403 aaPredicted RBP9.08□□□□□ -0.96
USP16-203ENST00000399975 U2SURPO15042 1029 aaKnown RBP9.07□□□□□ -0.96
USP16-203ENST00000399975 HAP1P54257 671 aaPredicted RBP9.07□□□□□ -0.96
USP16-203ENST00000399975 CRB1P82279 1406 aa9.07□□□□□ -0.96
USP16-203ENST00000399975 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
USP16-203ENST00000399975 SHANK3Q9BYB0 1731 aa9.07□□□□□ -0.96
USP16-203ENST00000399975 ZNF521Q96K83 1311 aa9.06□□□□□ -0.96
USP16-203ENST00000399975 NBPF6Q5VWK0 638 aa9.06□□□□□ -0.96
USP16-203ENST00000399975 NBPF4Q96M43 638 aa9.06□□□□□ -0.96
USP16-203ENST00000399975 CARD10Q9BWT7 1032 aa9.06□□□□□ -0.96
USP16-203ENST00000399975 CHRNA2Q15822 529 aa9.06□□□□□ -0.96
USP16-203ENST00000399975 FNBP4Q8N3X1 1017 aaPredicted RBP9.06□□□□□ -0.96
USP16-203ENST00000399975 DISP2A7MBM2 1401 aa9.06□□□□□ -0.96
USP16-203ENST00000399975 SULT6B1Q6IMI4 303 aa9.06□□□□□ -0.96
USP16-203ENST00000399975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.06□□□□□ -0.961e-6■■■■□ 22.7
USP16-203ENST00000399975 PRKAR2BP31323 418 aa9.05□□□□□ -0.96
USP16-203ENST00000399975 VIRMAQ69YN4 1812 aaKnown RBP9.05□□□□□ -0.96
USP16-203ENST00000399975 OVOS2A0A0G2JMS6 1433 aa9.05□□□□□ -0.96
USP16-203ENST00000399975 PDE3BQ13370 1112 aa9.05□□□□□ -0.96
USP16-203ENST00000399975 NFE2L2Q16236 605 aa9.05□□□□□ -0.96
USP16-203ENST00000399975 BCL9LQ86UU0 1499 aa9.05□□□□□ -0.96
USP16-203ENST00000399975 HTATSF1O43719 755 aaKnown RBP9.04□□□□□ -0.96
USP16-203ENST00000399975 AEBP1Q8IUX7 1158 aa9.04□□□□□ -0.96
USP16-203ENST00000399975 TCP11L2Q8N4U5 519 aa9.04□□□□□ -0.96
USP16-203ENST00000399975 THRAP3Q9Y2W1 955 aaKnown RBP9.04□□□□□ -0.96
USP16-203ENST00000399975 MAPK8IP3Q9UPT6 1336 aa9.04□□□□□ -0.96
USP16-203ENST00000399975 TMPOP42166 694 aaKnown RBP9.04□□□□□ -0.96
USP16-203ENST00000399975 HNRNPUQ00839 825 aaKnown RBP eCLIP9.04□□□□□ -0.96
USP16-203ENST00000399975 POTEDQ86YR6 584 aa9.04□□□□□ -0.96
USP16-203ENST00000399975 APAF1O14727 1248 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 NEFMP07197 916 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 HMOX1P09601 288 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 AMOTQ4VCS5 1084 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 CCDC146Q8IYE0 955 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 BTG4Q9NY30 223 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 IL16Q14005 1332 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 ZBTB7CA1YPR0 619 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 WDR63Q8IWG1 891 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 GAS2L2Q8NHY3 880 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 LTV1Q96GA3 475 aaPredicted RBP9.03□□□□□ -0.96
USP16-203ENST00000399975 THSD7AQ9UPZ6 1657 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 MEGF6O75095 1541 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 SIPA1L3O60292 1781 aaPredicted RBP9.03□□□□□ -0.96
USP16-203ENST00000399975 SCN11AQ9UI33 1791 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 LMOD3Q0VAK6 560 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 PHACTR3Q96KR7 559 aa9.03□□□□□ -0.96
USP16-203ENST00000399975 ATRNO75882 1429 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms