RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 SOGA3Q5TF21 947 aa13.12□□□□□ -0.31
CACNA1C-215ENST00000399637 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
CACNA1C-215ENST00000399637 HIP1O00291 1037 aa13.11□□□□□ -0.31
CACNA1C-215ENST00000399637 PIP4K2AP48426 406 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-215ENST00000399637 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-215ENST00000399637 DNAI2Q9GZS0 605 aa13.11□□□□□ -0.31
CACNA1C-215ENST00000399637 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
CACNA1C-215ENST00000399637 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
CACNA1C-215ENST00000399637 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-215ENST00000399637 PPP4R3AQ6IN85 833 aa13.1□□□□□ -0.31
CACNA1C-215ENST00000399637 ZNF396Q96N95 335 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-215ENST00000399637 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
CACNA1C-215ENST00000399637 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
CACNA1C-215ENST00000399637 SEPT7Q16181 437 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-215ENST00000399637 C22orf23Q9BZE7 217 aa13.1□□□□□ -0.31
CACNA1C-215ENST00000399637 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
CACNA1C-215ENST00000399637 LNPKQ9C0E8 428 aa13.09□□□□□ -0.31
CACNA1C-215ENST00000399637 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
CACNA1C-215ENST00000399637 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
CACNA1C-215ENST00000399637 RAI14Q9P0K7 980 aa13.09□□□□□ -0.31
CACNA1C-215ENST00000399637 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
CACNA1C-215ENST00000399637 CCDC30Q5VVM6 783 aa13.09□□□□□ -0.31
CACNA1C-215ENST00000399637 MTHFSP49914 203 aa13.09□□□□□ -0.31
CACNA1C-215ENST00000399637 BRPF1P55201 1214 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-215ENST00000399637 IGHMBP2P38935 993 aaKnown RBP13.08□□□□□ -0.31
CACNA1C-215ENST00000399637 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
CACNA1C-215ENST00000399637 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
CACNA1C-215ENST00000399637 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-215ENST00000399637 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNA1C-215ENST00000399637 ZNHIT6Q9NWK9 470 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-215ENST00000399637 PRKCSHP14314 528 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 AAMPQ13685 434 aa13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 ENOX2Q16206 610 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 TNIP1Q15025 636 aa13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
CACNA1C-215ENST00000399637 TXLNBQ8N3L3 684 aa13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 GOLGA6L10A6NI86 522 aa13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 TOM1O60784 492 aa13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 CCDC57Q2TAC2 916 aa13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 CCDC85AQ96PX6 553 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 DACH1Q9UI36 760 aa13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 CLASRPQ8N2M8 674 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-215ENST00000399637 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 LUC7LQ9NQ29 371 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 STIM1Q13586 685 aa13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 CCDC69A6NI79 296 aa13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 STARD3NLO95772 234 aa13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 AXDND1Q5T1B0 1012 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
CACNA1C-215ENST00000399637 NASPP49321 788 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 GAS2L2Q8NHY3 880 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 TANGO6Q9C0B7 1094 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 GNAI3P08754 354 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 LEKR1Q6ZMV7 388 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 FEZ1Q99689 392 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 NF2P35240 595 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 STK38Q15208 465 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 CCDC181Q5TID7 509 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 LIG1P18858 919 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 SIL1Q9H173 461 aa13.04□□□□□ -0.32
CACNA1C-215ENST00000399637 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 MYO1BO43795 1136 aa13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 CBX1P83916 185 aa13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 LRP2BPQ9P2M1 347 aa13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 EP400NLQ6ZTU2 488 aa13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 CASKIN1Q8WXD9 1431 aa13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-215ENST00000399637 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
CACNA1C-215ENST00000399637 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.32
CACNA1C-215ENST00000399637 HFM1A2PYH4 1435 aa13.02□□□□□ -0.32
CACNA1C-215ENST00000399637 TIAM1Q13009 1591 aa13.02□□□□□ -0.32
CACNA1C-215ENST00000399637 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.32
CACNA1C-215ENST00000399637 IL27Q8NEV9 243 aa13.02□□□□□ -0.32
CACNA1C-215ENST00000399637 SERPINC1P01008 464 aa13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 GBP2P32456 591 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 RABEP1Q15276 862 aa13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 JMYQ8N9B5 988 aa13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 PDCP20941 246 aa13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 SSR1P43307 286 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 RFC4P35249 363 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms