RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
LAMA3-203ENST00000399516 TXLNBQ8N3L3 684 aa13.33□□□□□ -0.27
LAMA3-203ENST00000399516 HSP90AB3PQ58FF7 597 aa13.33□□□□□ -0.28
LAMA3-203ENST00000399516 GAS2L2Q8NHY3 880 aa13.33□□□□□ -0.28
LAMA3-203ENST00000399516 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
LAMA3-203ENST00000399516 ATP2B1P20020 1258 aa13.33□□□□□ -0.28
LAMA3-203ENST00000399516 C9orf84Q5VXU9 1444 aa13.33□□□□□ -0.28
LAMA3-203ENST00000399516 RAPGEF4Q8WZA2 1011 aa13.32□□□□□ -0.28
LAMA3-203ENST00000399516 SYCE3A1L190 88 aa13.32□□□□□ -0.28
LAMA3-203ENST00000399516 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
LAMA3-203ENST00000399516 GOLGA6L7A0A1B0GV03 622 aa13.32□□□□□ -0.28
LAMA3-203ENST00000399516 ERICH4A6NGS2 130 aa13.32□□□□□ -0.28
LAMA3-203ENST00000399516 NUP62CLQ9H1M0 184 aa13.32□□□□□ -0.28
LAMA3-203ENST00000399516 CCDC181Q5TID7 509 aa13.31□□□□□ -0.28
LAMA3-203ENST00000399516 SLC3A2P08195 630 aaKnown RBP13.31□□□□□ -0.28
LAMA3-203ENST00000399516 STIM1Q13586 685 aa13.31□□□□□ -0.28
LAMA3-203ENST00000399516 WDR63Q8IWG1 891 aa13.31□□□□□ -0.28
LAMA3-203ENST00000399516 PDCL2Q8N4E4 241 aa13.31□□□□□ -0.28
LAMA3-203ENST00000399516 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
LAMA3-203ENST00000399516 LARP1BQ659C4 914 aaKnown RBP13.31□□□□□ -0.28
LAMA3-203ENST00000399516 ATF7IPQ6VMQ6 1270 aa13.31□□□□□ -0.28
LAMA3-203ENST00000399516 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
LAMA3-203ENST00000399516 CCAR1Q8IX12 1150 aaKnown RBP13.31□□□□□ -0.28
LAMA3-203ENST00000399516 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
LAMA3-203ENST00000399516 SRCIN1Q9C0H9 1055 aa13.3□□□□□ -0.28
LAMA3-203ENST00000399516 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
LAMA3-203ENST00000399516 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.28
LAMA3-203ENST00000399516 PDRG1Q9NUG6 133 aa13.3□□□□□ -0.28
LAMA3-203ENST00000399516 FAM193AP78312 1265 aa13.3□□□□□ -0.28
LAMA3-203ENST00000399516 KRT18P05783 430 aaKnown RBP13.3□□□□□ -0.28
LAMA3-203ENST00000399516 FAM177A1Q8N128 213 aaPredicted RBP13.3□□□□□ -0.28
LAMA3-203ENST00000399516 PLCD4Q9BRC7 762 aa13.3□□□□□ -0.28
LAMA3-203ENST00000399516 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
LAMA3-203ENST00000399516 MAP4K4O95819 1239 aaPredicted RBP13.29□□□□□ -0.28
LAMA3-203ENST00000399516 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
LAMA3-203ENST00000399516 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
LAMA3-203ENST00000399516 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
LAMA3-203ENST00000399516 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
LAMA3-203ENST00000399516 NLRP2Q9NX02 1062 aa13.29□□□□□ -0.28
LAMA3-203ENST00000399516 MSH5O43196 834 aa13.29□□□□□ -0.28
LAMA3-203ENST00000399516 ZSCAN31Q96LW9 406 aaPredicted RBP13.29□□□□□ -0.28
LAMA3-203ENST00000399516 SYCP1Q15431 976 aa13.29□□□□□ -0.28
LAMA3-203ENST00000399516 CENPHQ9H3R5 247 aa13.29□□□□□ -0.28
LAMA3-203ENST00000399516 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
LAMA3-203ENST00000399516 PPP6R1Q9UPN7 881 aa13.28□□□□□ -0.28
LAMA3-203ENST00000399516 ENOX2Q16206 610 aaKnown RBP13.28□□□□□ -0.28
LAMA3-203ENST00000399516 CCDC102AQ96A19 550 aa13.28□□□□□ -0.28
LAMA3-203ENST00000399516 ZRSR2Q15696 482 aaKnown RBP13.28□□□□□ -0.28
LAMA3-203ENST00000399516 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
LAMA3-203ENST00000399516 CDKL5O76039 1030 aa13.28□□□□□ -0.28
LAMA3-203ENST00000399516 USP8P40818 1118 aa13.28□□□□□ -0.28
LAMA3-203ENST00000399516 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
LAMA3-203ENST00000399516 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.28
LAMA3-203ENST00000399516 KIF2AO00139 706 aaPredicted RBP13.27□□□□□ -0.28
LAMA3-203ENST00000399516 MAP3K11Q16584 847 aa13.27□□□□□ -0.28
LAMA3-203ENST00000399516 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.29
LAMA3-203ENST00000399516 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.29
LAMA3-203ENST00000399516 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
LAMA3-203ENST00000399516 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
LAMA3-203ENST00000399516 CCDC158Q5M9N0 1113 aa13.26□□□□□ -0.29
LAMA3-203ENST00000399516 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
LAMA3-203ENST00000399516 JAKMIP1Q96N16 626 aaKnown RBP13.26□□□□□ -0.29
LAMA3-203ENST00000399516 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
LAMA3-203ENST00000399516 AACSQ86V21 672 aa13.26□□□□□ -0.29
LAMA3-203ENST00000399516 SYNJ2O15056 1496 aa13.25□□□□□ -0.29
LAMA3-203ENST00000399516 SIL1Q9H173 461 aa13.25□□□□□ -0.29
LAMA3-203ENST00000399516 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
LAMA3-203ENST00000399516 CAMK4Q16566 473 aa13.25□□□□□ -0.29
LAMA3-203ENST00000399516 NBPF1Q3BBV0 1214 aa13.25□□□□□ -0.29
LAMA3-203ENST00000399516 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
LAMA3-203ENST00000399516 DAPK1P53355 1430 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 SMTNL1A8MU46 457 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
LAMA3-203ENST00000399516 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
LAMA3-203ENST00000399516 GPRASP1Q5JY77 1395 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 BLOC1S2Q6QNY1 142 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 NLRP6P59044 892 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 CCDC183Q5T5S1 534 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
LAMA3-203ENST00000399516 NACAP1Q9BZK3 213 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 ARHGAP29Q52LW3 1261 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 TANGO6Q9C0B7 1094 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 GNL3LQ9NVN8 582 aaKnown RBP13.24□□□□□ -0.29
LAMA3-203ENST00000399516 UBXN4Q92575 508 aa13.24□□□□□ -0.29
LAMA3-203ENST00000399516 ANKRD30BQ9BXX2 1392 aa13.23□□□□□ -0.29
LAMA3-203ENST00000399516 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
LAMA3-203ENST00000399516 INCENPQ9NQS7 918 aa13.23□□□□□ -0.29
LAMA3-203ENST00000399516 SEPT7Q16181 437 aaKnown RBP13.23□□□□□ -0.29
LAMA3-203ENST00000399516 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
LAMA3-203ENST00000399516 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
LAMA3-203ENST00000399516 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
LAMA3-203ENST00000399516 NBPF8Q3BBV2 869 aa13.23□□□□□ -0.29
LAMA3-203ENST00000399516 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
LAMA3-203ENST00000399516 NOL7Q9UMY1 257 aaKnown RBP13.23□□□□□ -0.29
LAMA3-203ENST00000399516 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
LAMA3-203ENST00000399516 TMCO3Q6UWJ1 677 aa13.23□□□□□ -0.29
LAMA3-203ENST00000399516 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
LAMA3-203ENST00000399516 KRT32Q14532 448 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms