RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TSHZ1Q6ZSZ6 1077 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 CCDC7Q96M83 1385 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 ST20-MTHFSA0A0A6YYL1 179 aa8.01□□□□□ -1.13
TRAPPC13-202ENST00000399438 TTLL12Q14166 644 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC13-202ENST00000399438 C4orf46Q504U0 113 aa8.01□□□□□ -1.13
TRAPPC13-202ENST00000399438 ADGRL1O94910 1474 aa8.01□□□□□ -1.13
TRAPPC13-202ENST00000399438 SHANK2Q9UPX8 1470 aa8.01□□□□□ -1.13
TRAPPC13-202ENST00000399438 EXOC5O00471 708 aa8.01□□□□□ -1.13
TRAPPC13-202ENST00000399438 NBPF1Q3BBV0 1214 aa8.01□□□□□ -1.13
TRAPPC13-202ENST00000399438 MAST1Q9Y2H9 1570 aa8□□□□□ -1.13
TRAPPC13-202ENST00000399438 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
TRAPPC13-202ENST00000399438 CCDC141Q6ZP82 1450 aa8□□□□□ -1.13
TRAPPC13-202ENST00000399438 FBXO31Q5XUX0 539 aaPredicted RBP8□□□□□ -1.13
TRAPPC13-202ENST00000399438 ADGBQ8N7X0 1667 aa8□□□□□ -1.13
TRAPPC13-202ENST00000399438 PDAP1Q13442 181 aaKnown RBP7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 CAMK2BQ13554 666 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 TAGLNQ01995 201 aaKnown RBP7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 FRMPD1Q5SYB0 1578 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 USP47Q96K76 1375 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 POGZQ7Z3K3 1410 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 SCAPERQ9BY12 1400 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 TRAPPC8Q9Y2L5 1435 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 RICTORQ6R327 1708 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 MFSD10Q14728 455 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 PIF1Q9H611 641 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 KDM5CP41229 1560 aa7.99□□□□□ -1.13
TRAPPC13-202ENST00000399438 NCOA1Q15788 1441 aa7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 KIF4AO95239 1232 aa7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 CCDC144BQ3MJ40 725 aa7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 CC2D1BQ5T0F9 858 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 FTSJ3Q8IY81 847 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 GNL3LQ9NVN8 582 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 RBM19Q9Y4C8 960 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 ANKRD50Q9ULJ7 1429 aa7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 ADGRL2O95490 1459 aa7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 FAM193AP78312 1265 aa7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 C11orf96Q7Z7L8 435 aa7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 INO80Q9ULG1 1556 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC13-202ENST00000399438 TCEAL1Q15170 157 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 SDR16C5Q8N3Y7 309 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 HSP90AB2PQ58FF8 381 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 CACTIN-AS1Q8N1I8 211 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 MTMR14Q8NCE2 650 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 CNTLNQ9NXG0 1405 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 PZPP20742 1482 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 ZNF518AQ6AHZ1 1483 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 PPP4CP60510 307 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 PHLDB3Q6NSJ2 640 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 BANK1Q8NDB2 785 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 ROCK1Q13464 1354 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 KIF15Q9NS87 1388 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 C9orf84Q5VXU9 1444 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 ZFYVE16Q7Z3T8 1539 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 PLXNC1O60486 1568 aa7.97□□□□□ -1.13
TRAPPC13-202ENST00000399438 GCC2Q8IWJ2 1684 aa7.96□□□□□ -1.13
TRAPPC13-202ENST00000399438 ZMYM4Q5VZL5 1548 aa7.96□□□□□ -1.13
TRAPPC13-202ENST00000399438 ANKRD30AQ9BXX3 1397 aa7.96□□□□□ -1.13
TRAPPC13-202ENST00000399438 ERCC5P28715 1186 aaPredicted RBP7.96□□□□□ -1.13
TRAPPC13-202ENST00000399438 ZNF467Q7Z7K2 595 aaPredicted RBP7.96□□□□□ -1.13
TRAPPC13-202ENST00000399438 NOP58Q9Y2X3 529 aaKnown RBP7.96□□□□□ -1.13
TRAPPC13-202ENST00000399438 BDNFP23560 247 aa7.96□□□□□ -1.14
TRAPPC13-202ENST00000399438 GYS2P54840 703 aa7.96□□□□□ -1.14
TRAPPC13-202ENST00000399438 RTEL1-TNFRSF6BF6WH68 1400 aa7.96□□□□□ -1.14
TRAPPC13-202ENST00000399438 FECHP22830 423 aa7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 RPRD2Q5VT52 1461 aaKnown RBP7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 AFAP1Q8N556 730 aa7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 TMC1Q8TDI8 760 aa7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 HECW2Q9P2P5 1572 aa7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 PHF14O94880 888 aa7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 ATP7AQ04656 1500 aa7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 KIDINS220Q9ULH0 1771 aa7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 MLH3Q9UHC1 1453 aa7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 COL17A1Q9UMD9 1497 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC13-202ENST00000399438 SKAP1Q86WV1 359 aa7.94□□□□□ -1.14
TRAPPC13-202ENST00000399438 PIK3R5Q8WYR1 880 aa7.94□□□□□ -1.14
TRAPPC13-202ENST00000399438 DHX38Q92620 1227 aaKnown RBP7.94□□□□□ -1.14
TRAPPC13-202ENST00000399438 MARSP56192 900 aaKnown RBP7.94□□□□□ -1.14
TRAPPC13-202ENST00000399438 HDGFL1Q5TGJ6 251 aa7.94□□□□□ -1.14
TRAPPC13-202ENST00000399438 CCDC146Q8IYE0 955 aa7.94□□□□□ -1.14
TRAPPC13-202ENST00000399438 PPP1R12CQ9BZL4 782 aa7.94□□□□□ -1.14
TRAPPC13-202ENST00000399438 ATG7O95352 703 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 PLEKHG6Q3KR16 790 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 RPUSD2Q8IZ73 545 aaKnown RBP7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 BRINP2Q9C0B6 783 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 ANKRD33BA6NCL7 494 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 ABL2P42684 1182 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 EVA1CP58658 441 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 RHBDL3P58872 404 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 TANGO6Q9C0B7 1094 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 COMMD10Q9Y6G5 202 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 LIG1P18858 919 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 ABCA6Q8N139 1617 aa7.93□□□□□ -1.14
TRAPPC13-202ENST00000399438 DEKP35659 375 aaKnown RBP7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 FBXO33Q7Z6M2 555 aa7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 IRF2BPLQ9H1B7 796 aa7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 ROCK2O75116 1388 aaKnown RBP7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 SPAG9O60271 1321 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms