RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 OTUD7AQ8TE49 926 aaPredicted RBP17.92■□□□□ 0.46
ITSN1-210ENST00000399353 FBXW7Q969H0 707 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 CABP2Q9NPB3 220 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 SLC4A10Q6U841 1118 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 TMX3Q96JJ7 454 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 TMX1Q9H3N1 280 aa17.92■□□□□ 0.46
ITSN1-210ENST00000399353 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
ITSN1-210ENST00000399353 HMOX1P09601 288 aa17.91■□□□□ 0.46
ITSN1-210ENST00000399353 VPS37CA5D8V6 355 aaPredicted RBP17.91■□□□□ 0.46
ITSN1-210ENST00000399353 OGFRQ9NZT2 677 aa17.91■□□□□ 0.46
ITSN1-210ENST00000399353 KIF14Q15058 1648 aa17.9■□□□□ 0.46
ITSN1-210ENST00000399353 PTGS1P23219 599 aa17.9■□□□□ 0.46
ITSN1-210ENST00000399353 GORABQ5T7V8 394 aa17.9■□□□□ 0.46
ITSN1-210ENST00000399353 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
ITSN1-210ENST00000399353 INSRP06213 1382 aa17.9■□□□□ 0.46
ITSN1-210ENST00000399353 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
ITSN1-210ENST00000399353 POLR3GO15318 223 aaPredicted RBP17.89■□□□□ 0.45
ITSN1-210ENST00000399353 COL17A1Q9UMD9 1497 aaPredicted RBP17.89■□□□□ 0.45
ITSN1-210ENST00000399353 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
ITSN1-210ENST00000399353 TRMT1Q9NXH9 659 aaKnown RBP17.89■□□□□ 0.45
ITSN1-210ENST00000399353 TAOK2Q9UL54 1235 aa17.88■□□□□ 0.45
ITSN1-210ENST00000399353 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
ITSN1-210ENST00000399353 CCDC186Q7Z3E2 898 aa17.88■□□□□ 0.45
ITSN1-210ENST00000399353 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
ITSN1-210ENST00000399353 CNPY2Q9Y2B0 182 aa17.88■□□□□ 0.45
ITSN1-210ENST00000399353 GPATCH8Q9UKJ3 1502 aaKnown RBP17.88■□□□□ 0.45
ITSN1-210ENST00000399353 TAF7LQ5H9L4 462 aa17.88■□□□□ 0.45
ITSN1-210ENST00000399353 ATAD2Q6PL18 1390 aa17.87■□□□□ 0.45
ITSN1-210ENST00000399353 IRX5P78411 483 aaPredicted RBP17.87■□□□□ 0.45
ITSN1-210ENST00000399353 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
ITSN1-210ENST00000399353 CTTNBP2Q8WZ74 1663 aa17.87■□□□□ 0.45
ITSN1-210ENST00000399353 IBTKQ9P2D0 1353 aaPredicted RBP17.87■□□□□ 0.45
ITSN1-210ENST00000399353 GCC2Q8IWJ2 1684 aa17.87■□□□□ 0.45
ITSN1-210ENST00000399353 ZDHHC9Q9Y397 364 aa17.86■□□□□ 0.45
ITSN1-210ENST00000399353 SDSP20132 328 aa17.86■□□□□ 0.45
ITSN1-210ENST00000399353 LRMPQ12912 555 aa17.86■□□□□ 0.45
ITSN1-210ENST00000399353 CKAP2LQ8IYA6 745 aa17.86■□□□□ 0.45
ITSN1-210ENST00000399353 FEZ1Q99689 392 aa17.85■□□□□ 0.45
ITSN1-210ENST00000399353 AK9Q5TCS8 1911 aa17.85■□□□□ 0.45
ITSN1-210ENST00000399353 ERC2O15083 957 aa17.85■□□□□ 0.45
ITSN1-210ENST00000399353 FKBP5Q13451 457 aaPredicted RBP17.85■□□□□ 0.45
ITSN1-210ENST00000399353 CCDC183Q5T5S1 534 aa17.85■□□□□ 0.45
ITSN1-210ENST00000399353 HDGFL2Q7Z4V5 671 aaPredicted RBP17.85■□□□□ 0.45
ITSN1-210ENST00000399353 KRT222Q8N1A0 295 aa17.85■□□□□ 0.45
ITSN1-210ENST00000399353 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
ITSN1-210ENST00000399353 GSPT1P15170 499 aaKnown RBP17.84■□□□□ 0.45
ITSN1-210ENST00000399353 KDM4AO75164 1064 aa17.84■□□□□ 0.45
ITSN1-210ENST00000399353 IRX3P78415 501 aaPredicted RBP17.84■□□□□ 0.45
ITSN1-210ENST00000399353 FILIP1Q7Z7B0 1213 aa17.84■□□□□ 0.45
ITSN1-210ENST00000399353 GTF3C6Q969F1 213 aa17.84■□□□□ 0.45
ITSN1-210ENST00000399353 DNAJC2Q99543 621 aaKnown RBP17.84■□□□□ 0.45
ITSN1-210ENST00000399353 CALCOCO1Q9P1Z2 691 aa17.84■□□□□ 0.45
ITSN1-210ENST00000399353 DDX54Q8TDD1 881 aaKnown RBP17.83■□□□□ 0.45
ITSN1-210ENST00000399353 SKIDA1Q1XH10 827 aa17.83■□□□□ 0.44
ITSN1-210ENST00000399353 FERMT3Q86UX7 667 aa17.83■□□□□ 0.44
ITSN1-210ENST00000399353 NUP153P49790 1475 aaKnown RBP17.82■□□□□ 0.44
ITSN1-210ENST00000399353 NUTM2FA1L443 756 aa17.82■□□□□ 0.44
ITSN1-210ENST00000399353 RTEL1-TNFRSF6BF6WH68 1400 aa17.82■□□□□ 0.44
ITSN1-210ENST00000399353 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
ITSN1-210ENST00000399353 PLEKHM2Q8IWE5 1019 aa17.82■□□□□ 0.44
ITSN1-210ENST00000399353 SYTL4Q96C24 671 aaPredicted RBP17.82■□□□□ 0.44
ITSN1-210ENST00000399353 SMC3Q9UQE7 1217 aa17.81■□□□□ 0.44
ITSN1-210ENST00000399353 ST7Q9NRC1 585 aa17.81■□□□□ 0.44
ITSN1-210ENST00000399353 ARHGAP5Q13017 1502 aa17.81■□□□□ 0.44
ITSN1-210ENST00000399353 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
ITSN1-210ENST00000399353 WDR33Q9C0J8 1336 aaKnown RBP17.8■□□□□ 0.44
ITSN1-210ENST00000399353 TTC22Q5TAA0 569 aa17.8■□□□□ 0.44
ITSN1-210ENST00000399353 PIK3C2GO75747 1445 aa17.8■□□□□ 0.44
ITSN1-210ENST00000399353 EVC2Q86UK5 1308 aa17.8■□□□□ 0.44
ITSN1-210ENST00000399353 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
ITSN1-210ENST00000399353 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
ITSN1-210ENST00000399353 CCDC192P0DO97 292 aa17.79■□□□□ 0.44
ITSN1-210ENST00000399353 NCBP1Q09161 790 aaKnown RBP17.79■□□□□ 0.44
ITSN1-210ENST00000399353 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
ITSN1-210ENST00000399353 NSD3Q9BZ95 1437 aa17.79■□□□□ 0.44
ITSN1-210ENST00000399353 ASXL1Q8IXJ9 1541 aa17.79■□□□□ 0.44
ITSN1-210ENST00000399353 LUZP1Q86V48 1076 aa17.79■□□□□ 0.44
ITSN1-210ENST00000399353 CCAR2Q8N163 923 aaKnown RBP17.79■□□□□ 0.44
ITSN1-210ENST00000399353 NOL10Q9BSC4 688 aaKnown RBP17.79■□□□□ 0.44
ITSN1-210ENST00000399353 FBLN1P23142 703 aa17.79■□□□□ 0.44
ITSN1-210ENST00000399353 UVSSAQ2YD98 709 aa17.79■□□□□ 0.44
ITSN1-210ENST00000399353 GOLGA6L19H0YKK7 550 aa17.78■□□□□ 0.44
ITSN1-210ENST00000399353 HTATSF1O43719 755 aaKnown RBP17.78■□□□□ 0.44
ITSN1-210ENST00000399353 GNL2Q13823 731 aaKnown RBP17.78■□□□□ 0.44
ITSN1-210ENST00000399353 TOMM22Q9NS69 142 aa17.78■□□□□ 0.44
ITSN1-210ENST00000399353 NCOA3Q9Y6Q9 1424 aa17.78■□□□□ 0.44
ITSN1-210ENST00000399353 KIAA1524Q8TCG1 905 aa17.78■□□□□ 0.44
ITSN1-210ENST00000399353 CHMP4CQ96CF2 233 aa17.78■□□□□ 0.44
ITSN1-210ENST00000399353 ADGRF5Q8IZF2 1346 aa17.78■□□□□ 0.44
ITSN1-210ENST00000399353 MX1P20591 662 aa17.77■□□□□ 0.44
ITSN1-210ENST00000399353 TSPYL6Q8N831 410 aa17.77■□□□□ 0.44
ITSN1-210ENST00000399353 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.77■□□□□ 0.44
ITSN1-210ENST00000399353 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
ITSN1-210ENST00000399353 PRKAR2BP31323 418 aa17.77■□□□□ 0.44
ITSN1-210ENST00000399353 GABPB1Q06547 395 aaPredicted RBP17.77■□□□□ 0.44
ITSN1-210ENST00000399353 OS9Q13438 667 aaPredicted RBP17.77■□□□□ 0.44
ITSN1-210ENST00000399353 C10orf67Q8IYJ2 551 aa17.77■□□□□ 0.44
ITSN1-210ENST00000399353 NRBP1Q9UHY1 535 aa17.77■□□□□ 0.44
ITSN1-210ENST00000399353 HOMER1Q86YM7 354 aa17.77■□□□□ 0.43
ITSN1-210ENST00000399353 NECTIN2Q92692 538 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms