RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 MVPQ14764 893 aaKnown RBP19.03■□□□□ 0.64
ITSN1-209ENST00000399352 LUC7LQ9NQ29 371 aaKnown RBP19.03■□□□□ 0.64
ITSN1-209ENST00000399352 IKQ13123 557 aaPredicted RBP19.03■□□□□ 0.64
ITSN1-209ENST00000399352 ZRSR2Q15696 482 aaKnown RBP19.03■□□□□ 0.64
ITSN1-209ENST00000399352 CCDC184Q52MB2 194 aa19.03■□□□□ 0.64
ITSN1-209ENST00000399352 PTPN14Q15678 1187 aa19.03■□□□□ 0.64
ITSN1-209ENST00000399352 GIMAP7Q8NHV1 300 aa19.03■□□□□ 0.64
ITSN1-209ENST00000399352 ZNF428Q96B54 188 aa19.03■□□□□ 0.64
ITSN1-209ENST00000399352 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
ITSN1-209ENST00000399352 PSME1Q06323 249 aa19.02■□□□□ 0.64
ITSN1-209ENST00000399352 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
ITSN1-209ENST00000399352 SLC4A2P04920 1241 aa19.02■□□□□ 0.64
ITSN1-209ENST00000399352 MAP3K11Q16584 847 aa19.02■□□□□ 0.64
ITSN1-209ENST00000399352 PDCL3Q9H2J4 239 aa19.02■□□□□ 0.64
ITSN1-209ENST00000399352 ARHGAP29Q52LW3 1261 aa19.02■□□□□ 0.63
ITSN1-209ENST00000399352 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.63
ITSN1-209ENST00000399352 RAPGEF4Q8WZA2 1011 aa19.02■□□□□ 0.63
ITSN1-209ENST00000399352 PDRG1Q9NUG6 133 aa19.01■□□□□ 0.63
ITSN1-209ENST00000399352 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
ITSN1-209ENST00000399352 STIM1Q13586 685 aa19.01■□□□□ 0.63
ITSN1-209ENST00000399352 TMEM132EQ6IEE7 984 aa19.01■□□□□ 0.63
ITSN1-209ENST00000399352 ATF7IPQ6VMQ6 1270 aa19.01■□□□□ 0.63
ITSN1-209ENST00000399352 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
ITSN1-209ENST00000399352 POLR3GO15318 223 aaPredicted RBP19.01■□□□□ 0.63
ITSN1-209ENST00000399352 CFAP100Q494V2 611 aa19.01■□□□□ 0.63
ITSN1-209ENST00000399352 MIA2Q96PC5 1412 aa19.01■□□□□ 0.63
ITSN1-209ENST00000399352 BLOC1S2Q6QNY1 142 aa19■□□□□ 0.63
ITSN1-209ENST00000399352 ZHX3Q9H4I2 956 aa19■□□□□ 0.63
ITSN1-209ENST00000399352 CRACR2AQ9BSW2 395 aa19■□□□□ 0.63
ITSN1-209ENST00000399352 SIL1Q9H173 461 aa19■□□□□ 0.63
ITSN1-209ENST00000399352 EPB41L2O43491 1005 aaKnown RBP19■□□□□ 0.63
ITSN1-209ENST00000399352 FERMT3Q86UX7 667 aa19■□□□□ 0.63
ITSN1-209ENST00000399352 ERC1Q8IUD2 1116 aa19■□□□□ 0.63
ITSN1-209ENST00000399352 IQCEQ6IPM2 695 aa18.99■□□□□ 0.63
ITSN1-209ENST00000399352 DYDC1Q8WWB3 177 aa18.99■□□□□ 0.63
ITSN1-209ENST00000399352 CFAP45Q9UL16 551 aa18.99■□□□□ 0.63
ITSN1-209ENST00000399352 INCENPQ9NQS7 918 aa18.99■□□□□ 0.63
ITSN1-209ENST00000399352 TRIM22Q8IYM9 498 aa18.99■□□□□ 0.63
ITSN1-209ENST00000399352 JPH4Q96JJ6 628 aa18.99■□□□□ 0.63
ITSN1-209ENST00000399352 ZNF644Q9H582 1327 aaPredicted RBP18.98■□□□□ 0.63
ITSN1-209ENST00000399352 CWC27Q6UX04 472 aaKnown RBP18.98■□□□□ 0.63
ITSN1-209ENST00000399352 FAM177BA6PVY3 158 aa18.98■□□□□ 0.63
ITSN1-209ENST00000399352 URI1O94763 535 aaPredicted RBP18.98■□□□□ 0.63
ITSN1-209ENST00000399352 SFPQP23246 707 aaKnown RBP eCLIP18.98■□□□□ 0.63
ITSN1-209ENST00000399352 ZMYND15Q9H091 742 aa18.97■□□□□ 0.63
ITSN1-209ENST00000399352 SHTN1A0MZ66 631 aa18.97■□□□□ 0.63
ITSN1-209ENST00000399352 KIAA1328Q86T90 577 aa18.97■□□□□ 0.63
ITSN1-209ENST00000399352 KIF18AQ8NI77 898 aa18.97■□□□□ 0.63
ITSN1-209ENST00000399352 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
ITSN1-209ENST00000399352 SMTNL1A8MU46 457 aa18.96■□□□□ 0.63
ITSN1-209ENST00000399352 GTF2F1P35269 517 aaKnown RBP eCLIP18.96■□□□□ 0.636e-6■■□□□ 12.3
ITSN1-209ENST00000399352 DDX11Q96FC9 970 aa18.96■□□□□ 0.63
ITSN1-209ENST00000399352 CALCOCO1Q9P1Z2 691 aa18.96■□□□□ 0.63
ITSN1-209ENST00000399352 NLRP2Q9NX02 1062 aa18.96■□□□□ 0.63
ITSN1-209ENST00000399352 TXLNBQ8N3L3 684 aa18.96■□□□□ 0.63
ITSN1-209ENST00000399352 TTC39AQ5SRH9 613 aa18.95■□□□□ 0.62
ITSN1-209ENST00000399352 NUP133Q8WUM0 1156 aa18.95■□□□□ 0.62
ITSN1-209ENST00000399352 ZSCAN31Q96LW9 406 aaPredicted RBP18.95■□□□□ 0.62
ITSN1-209ENST00000399352 USP25Q9UHP3 1055 aa18.95■□□□□ 0.62
ITSN1-209ENST00000399352 SPDYE4A6NLX3 237 aa18.95■□□□□ 0.62
ITSN1-209ENST00000399352 PPP4R3BQ5MIZ7 849 aa18.95■□□□□ 0.62
ITSN1-209ENST00000399352 C16orf45Q96MC5 204 aaPredicted RBP18.95■□□□□ 0.62
ITSN1-209ENST00000399352 GBP3Q9H0R5 595 aa18.95■□□□□ 0.62
ITSN1-209ENST00000399352 IL1RAPL2Q9NP60 686 aa18.95■□□□□ 0.62
ITSN1-209ENST00000399352 SEPT11Q9NVA2 429 aaKnown RBP18.95■□□□□ 0.62
ITSN1-209ENST00000399352 KIF2AO00139 706 aaPredicted RBP18.95■□□□□ 0.62
ITSN1-209ENST00000399352 IPO4Q8TEX9 1081 aaKnown RBP18.94■□□□□ 0.62
ITSN1-209ENST00000399352 TNNT1P13805 278 aa18.94■□□□□ 0.62
ITSN1-209ENST00000399352 EIF5P55010 431 aaKnown RBP18.94■□□□□ 0.62
ITSN1-209ENST00000399352 FGD6Q6ZV73 1430 aa18.94■□□□□ 0.62
ITSN1-209ENST00000399352 ANKRD18AQ8IVF6 992 aa18.94■□□□□ 0.62
ITSN1-209ENST00000399352 CCDC158Q5M9N0 1113 aa18.94■□□□□ 0.62
ITSN1-209ENST00000399352 CCDC148Q8NFR7 591 aa18.94■□□□□ 0.62
ITSN1-209ENST00000399352 TRMT1Q9NXH9 659 aaKnown RBP18.94■□□□□ 0.62
ITSN1-209ENST00000399352 SSFA2P28290 1259 aa18.93■□□□□ 0.62
ITSN1-209ENST00000399352 CCT4P50991 539 aaKnown RBP18.93■□□□□ 0.62
ITSN1-209ENST00000399352 CCDC69A6NI79 296 aa18.93■□□□□ 0.62
ITSN1-209ENST00000399352 TMEM132AQ24JP5 1023 aa18.93■□□□□ 0.62
ITSN1-209ENST00000399352 GPATCH11Q8N954 259 aa18.93■□□□□ 0.62
ITSN1-209ENST00000399352 HDGFL1Q5TGJ6 251 aa18.93■□□□□ 0.62
ITSN1-209ENST00000399352 GAS2L2Q8NHY3 880 aa18.93■□□□□ 0.62
ITSN1-209ENST00000399352 CASTP20810 708 aaKnown RBP18.92■□□□□ 0.62
ITSN1-209ENST00000399352 TICAM2Q86XR7 235 aa18.92■□□□□ 0.62
ITSN1-209ENST00000399352 NLRP6P59044 892 aa18.92■□□□□ 0.62
ITSN1-209ENST00000399352 CCDC83Q8IWF9 413 aa18.92■□□□□ 0.62
ITSN1-209ENST00000399352 TAF4BQ92750 862 aa18.92■□□□□ 0.62
ITSN1-209ENST00000399352 MYOM3Q5VTT5 1437 aa18.92■□□□□ 0.62
ITSN1-209ENST00000399352 CCDC183Q5T5S1 534 aa18.92■□□□□ 0.62
ITSN1-209ENST00000399352 EZRP15311 586 aaKnown RBP18.91■□□□□ 0.62
ITSN1-209ENST00000399352 CLIP2Q9UDT6 1046 aa18.91■□□□□ 0.62
ITSN1-209ENST00000399352 AACSQ86V21 672 aa18.91■□□□□ 0.62
ITSN1-209ENST00000399352 SLC3A2P08195 630 aaKnown RBP18.91■□□□□ 0.62
ITSN1-209ENST00000399352 KIF4BQ2VIQ3 1234 aa18.91■□□□□ 0.62
ITSN1-209ENST00000399352 NBPF1Q3BBV0 1214 aa18.91■□□□□ 0.62
ITSN1-209ENST00000399352 CFAP70Q5T0N1 1121 aa18.91■□□□□ 0.62
ITSN1-209ENST00000399352 PAF1Q8N7H5 531 aa18.91■□□□□ 0.62
ITSN1-209ENST00000399352 TMX1Q9H3N1 280 aa18.91■□□□□ 0.62
ITSN1-209ENST00000399352 ZSCAN12O43309 604 aa18.91■□□□□ 0.62
ITSN1-209ENST00000399352 SSBP05455 408 aaKnown RBP eCLIP18.91■□□□□ 0.62
ITSN1-209ENST00000399352 TNPO1Q92973 898 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms