RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 ATP2B2Q01814 1243 aa15.67■□□□□ 0.1
ITSN1-208ENST00000399349 WDR63Q8IWG1 891 aa15.67■□□□□ 0.1
ITSN1-208ENST00000399349 AACSQ86V21 672 aa15.67■□□□□ 0.1
ITSN1-208ENST00000399349 TMEM57Q8N5G2 664 aa15.67■□□□□ 0.1
ITSN1-208ENST00000399349 C9orf84Q5VXU9 1444 aa15.66■□□□□ 0.1
ITSN1-208ENST00000399349 CABP4P57796 275 aa15.66■□□□□ 0.1
ITSN1-208ENST00000399349 C20orf194Q5TEA3 1177 aa15.66■□□□□ 0.1
ITSN1-208ENST00000399349 FAM177A1Q8N128 213 aaPredicted RBP15.66■□□□□ 0.1
ITSN1-208ENST00000399349 AK7Q96M32 723 aa15.66■□□□□ 0.1
ITSN1-208ENST00000399349 LETM1O95202 739 aaPredicted RBP15.65■□□□□ 0.1
ITSN1-208ENST00000399349 DCTN1Q14203 1278 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 TOM1L2Q6ZVM7 507 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 TNMDQ9H2S6 317 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 CWC22Q9HCG8 908 aaKnown RBP15.65■□□□□ 0.1
ITSN1-208ENST00000399349 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 ESPNB1AK53 854 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 SERPINC1P01008 464 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
ITSN1-208ENST00000399349 ZNF396Q96N95 335 aaPredicted RBP15.65■□□□□ 0.1
ITSN1-208ENST00000399349 HFM1A2PYH4 1435 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 JAKMIP1Q96N16 626 aaKnown RBP15.65■□□□□ 0.1
ITSN1-208ENST00000399349 GRPEL1Q9HAV7 217 aa15.65■□□□□ 0.1
ITSN1-208ENST00000399349 CCDC173Q0VFZ6 552 aa15.64■□□□□ 0.1
ITSN1-208ENST00000399349 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.1
ITSN1-208ENST00000399349 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
ITSN1-208ENST00000399349 WDR33Q9C0J8 1336 aaKnown RBP15.64■□□□□ 0.09
ITSN1-208ENST00000399349 KRT85P78386 507 aa15.64■□□□□ 0.09
ITSN1-208ENST00000399349 BLOC1S2Q6QNY1 142 aa15.64■□□□□ 0.09
ITSN1-208ENST00000399349 CDK5RAP3Q96JB5 506 aa15.64■□□□□ 0.09
ITSN1-208ENST00000399349 ACBD3Q9H3P7 528 aa15.64■□□□□ 0.09
ITSN1-208ENST00000399349 CCDC192P0DO97 292 aa15.64■□□□□ 0.09
ITSN1-208ENST00000399349 ERBINQ96RT1 1412 aa15.64■□□□□ 0.09
ITSN1-208ENST00000399349 UPF3BQ9BZI7 483 aaKnown RBP15.64■□□□□ 0.09
ITSN1-208ENST00000399349 MCM4P33991 863 aa15.63■□□□□ 0.09
ITSN1-208ENST00000399349 FILIP1LQ4L180 1135 aa15.63■□□□□ 0.09
ITSN1-208ENST00000399349 FERMT3Q86UX7 667 aa15.63■□□□□ 0.09
ITSN1-208ENST00000399349 MAP7D2Q96T17 732 aa15.63■□□□□ 0.09
ITSN1-208ENST00000399349 TMPOP42166 694 aaKnown RBP15.63■□□□□ 0.09
ITSN1-208ENST00000399349 HSP90AB2PQ58FF8 381 aa15.63■□□□□ 0.09
ITSN1-208ENST00000399349 MCM10Q7L590 875 aa15.63■□□□□ 0.09
ITSN1-208ENST00000399349 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
ITSN1-208ENST00000399349 SMG6Q86US8 1419 aaKnown RBP15.63■□□□□ 0.09
ITSN1-208ENST00000399349 C11orf95C9JLR9 678 aaPredicted RBP15.63■□□□□ 0.09
ITSN1-208ENST00000399349 TXLNAP40222 546 aa15.62■□□□□ 0.09
ITSN1-208ENST00000399349 ZC3H6P61129 1189 aaKnown RBP15.62■□□□□ 0.09
ITSN1-208ENST00000399349 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
ITSN1-208ENST00000399349 DDX11Q96FC9 970 aa15.62■□□□□ 0.09
ITSN1-208ENST00000399349 ZHX3Q9H4I2 956 aa15.62■□□□□ 0.09
ITSN1-208ENST00000399349 SMARCA5O60264 1052 aaPredicted RBP15.62■□□□□ 0.09
ITSN1-208ENST00000399349 KRT18P05783 430 aaKnown RBP15.62■□□□□ 0.09
ITSN1-208ENST00000399349 CCDC57Q2TAC2 916 aa15.62■□□□□ 0.09
ITSN1-208ENST00000399349 FILIP1Q7Z7B0 1213 aa15.62■□□□□ 0.09
ITSN1-208ENST00000399349 PIBF1Q8WXW3 757 aa15.62■□□□□ 0.09
ITSN1-208ENST00000399349 RTEL1-TNFRSF6BF6WH68 1400 aa15.61■□□□□ 0.09
ITSN1-208ENST00000399349 SYNJ2O15056 1496 aa15.61■□□□□ 0.09
ITSN1-208ENST00000399349 MPHOSPH8Q99549 860 aa15.61■□□□□ 0.09
ITSN1-208ENST00000399349 CDR1P51861 262 aa15.61■□□□□ 0.09
ITSN1-208ENST00000399349 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.61■□□□□ 0.09
ITSN1-208ENST00000399349 PDRG1Q9NUG6 133 aa15.61■□□□□ 0.09
ITSN1-208ENST00000399349 MAGEC2Q9UBF1 373 aaPredicted RBP15.61■□□□□ 0.09
ITSN1-208ENST00000399349 BTBD11A6QL63 1104 aa15.6■□□□□ 0.09
ITSN1-208ENST00000399349 TRIM22Q8IYM9 498 aa15.6■□□□□ 0.09
ITSN1-208ENST00000399349 JMYQ8N9B5 988 aa15.6■□□□□ 0.09
ITSN1-208ENST00000399349 CCAR1Q8IX12 1150 aaKnown RBP15.6■□□□□ 0.09
ITSN1-208ENST00000399349 SPATA32Q96LK8 384 aa15.6■□□□□ 0.09
ITSN1-208ENST00000399349 NUTM2BA6NNL0 878 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-208ENST00000399349 NUTM2EB1AL46 878 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-208ENST00000399349 NUTM2AQ8IVF1 878 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-208ENST00000399349 SLC3A2P08195 630 aaKnown RBP15.59■□□□□ 0.09
ITSN1-208ENST00000399349 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
ITSN1-208ENST00000399349 ANKRD1Q15327 319 aa15.59■□□□□ 0.09
ITSN1-208ENST00000399349 AEBP1Q8IUX7 1158 aa15.59■□□□□ 0.09
ITSN1-208ENST00000399349 SMARCE1Q969G3 411 aa15.59■□□□□ 0.09
ITSN1-208ENST00000399349 FCHSD2O94868 740 aa15.59■□□□□ 0.09
ITSN1-208ENST00000399349 WAPLQ7Z5K2 1190 aa15.59■□□□□ 0.09
ITSN1-208ENST00000399349 SSH1Q8WYL5 1049 aa15.59■□□□□ 0.09
ITSN1-208ENST00000399349 CEP126Q9P2H0 1117 aa15.59■□□□□ 0.09
ITSN1-208ENST00000399349 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.09
ITSN1-208ENST00000399349 PRDM11Q9NQV5 511 aa15.58■□□□□ 0.09
ITSN1-208ENST00000399349 CCDC69A6NI79 296 aa15.58■□□□□ 0.08
ITSN1-208ENST00000399349 NFE2L2Q16236 605 aa15.58■□□□□ 0.08
ITSN1-208ENST00000399349 AXDND1Q5T1B0 1012 aaPredicted RBP15.58■□□□□ 0.08
ITSN1-208ENST00000399349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.58■□□□□ 0.08
ITSN1-208ENST00000399349 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.08
ITSN1-208ENST00000399349 NSD3Q9BZ95 1437 aa15.58■□□□□ 0.08
ITSN1-208ENST00000399349 H0YHG0 523 aa15.58■□□□□ 0.08
ITSN1-208ENST00000399349 HMGN5P82970 282 aaKnown RBP15.58■□□□□ 0.08
ITSN1-208ENST00000399349 PPP1R1BQ9UD71 204 aaPredicted RBP15.58■□□□□ 0.08
ITSN1-208ENST00000399349 GNL3LQ9NVN8 582 aaKnown RBP15.58■□□□□ 0.08
ITSN1-208ENST00000399349 CASTP20810 708 aaKnown RBP15.57■□□□□ 0.08
ITSN1-208ENST00000399349 SYCE3A1L190 88 aa15.57■□□□□ 0.08
ITSN1-208ENST00000399349 IDH1O75874 414 aaKnown RBP15.57■□□□□ 0.08
ITSN1-208ENST00000399349 THEMISQ8N1K5 641 aaPredicted RBP15.57■□□□□ 0.08
ITSN1-208ENST00000399349 RPAP2Q8IXW5 612 aaPredicted RBP15.57■□□□□ 0.08
ITSN1-208ENST00000399349 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
ITSN1-208ENST00000399349 PTCD1O75127 700 aaKnown RBP15.56■□□□□ 0.08
ITSN1-208ENST00000399349 CAMK4Q16566 473 aa15.56■□□□□ 0.08
ITSN1-208ENST00000399349 TMEM132AQ24JP5 1023 aa15.56■□□□□ 0.08
ITSN1-208ENST00000399349 F6X3S4 739 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms