RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
CDH23-203ENST00000398788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDH23-203ENST00000398788 NUP153P49790 1475 aaKnown RBP11.18□□□□□ -0.62
CDH23-203ENST00000398788 BAG4O95429 457 aaKnown RBP11.18□□□□□ -0.62
CDH23-203ENST00000398788 FOSBP53539 338 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 ESCO1Q5FWF5 840 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 HECW1Q76N89 1606 aa11.17□□□□□ -0.62
CDH23-203ENST00000398788 PES1O00541 588 aaKnown RBP11.17□□□□□ -0.62
CDH23-203ENST00000398788 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
CDH23-203ENST00000398788 EXOSC9Q06265 439 aaKnown RBP11.17□□□□□ -0.62
CDH23-203ENST00000398788 BCL2L12Q9HB09 334 aa11.17□□□□□ -0.62
CDH23-203ENST00000398788 IFIT2P09913 472 aaKnown RBP11.17□□□□□ -0.62
CDH23-203ENST00000398788 PPP2R1AP30153 589 aa11.17□□□□□ -0.62
CDH23-203ENST00000398788 IRX5P78411 483 aaPredicted RBP11.17□□□□□ -0.62
CDH23-203ENST00000398788 TPD52L1Q16890 204 aaPredicted RBP11.17□□□□□ -0.62
CDH23-203ENST00000398788 NOM1Q5C9Z4 860 aaKnown RBP11.16□□□□□ -0.62
CDH23-203ENST00000398788 MEX3CQ5U5Q3 659 aaKnown RBP11.16□□□□□ -0.62
CDH23-203ENST00000398788 TMX4Q9H1E5 349 aaPredicted RBP11.16□□□□□ -0.62
CDH23-203ENST00000398788 NCOA1Q15788 1441 aa11.16□□□□□ -0.62
CDH23-203ENST00000398788 ABCA8O94911 1581 aa11.16□□□□□ -0.62
CDH23-203ENST00000398788 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
CDH23-203ENST00000398788 RAD21O60216 631 aa11.16□□□□□ -0.62
CDH23-203ENST00000398788 OGFRQ9NZT2 677 aa11.16□□□□□ -0.62
CDH23-203ENST00000398788 LRRIQ1Q96JM4 1722 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 VPS37CA5D8V6 355 aaPredicted RBP11.15□□□□□ -0.62
CDH23-203ENST00000398788 POLR3GO15318 223 aaPredicted RBP11.15□□□□□ -0.62
CDH23-203ENST00000398788 GNAI1P63096 354 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 RAPGEF4Q8WZA2 1011 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 DEF6Q9H4E7 631 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 SKIDA1Q1XH10 827 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 C10orf67Q8IYJ2 551 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 KRT222Q8N1A0 295 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 NEUROD6Q96NK8 337 aa11.15□□□□□ -0.62
CDH23-203ENST00000398788 CWC15Q9P013 229 aaKnown RBP11.15□□□□□ -0.62
CDH23-203ENST00000398788 KIAA1107Q9UPP5 1409 aa11.15□□□□□ -0.63
CDH23-203ENST00000398788 VPS53Q5VIR6 699 aa11.15□□□□□ -0.63
CDH23-203ENST00000398788 FBXW7Q969H0 707 aa11.15□□□□□ -0.63
CDH23-203ENST00000398788 C16orf45Q96MC5 204 aaPredicted RBP11.15□□□□□ -0.63
CDH23-203ENST00000398788 DAPK1P53355 1430 aa11.14□□□□□ -0.63
CDH23-203ENST00000398788 REC8O95072 547 aa11.14□□□□□ -0.63
CDH23-203ENST00000398788 GPRASP1Q5JY77 1395 aa11.14□□□□□ -0.63
CDH23-203ENST00000398788 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
CDH23-203ENST00000398788 TEX2Q8IWB9 1127 aa11.14□□□□□ -0.63
CDH23-203ENST00000398788 ZKSCAN1P17029 563 aaPredicted RBP11.14□□□□□ -0.63
CDH23-203ENST00000398788 G3BP1Q13283 466 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDH23-203ENST00000398788 FEZ1Q99689 392 aa11.14□□□□□ -0.63
CDH23-203ENST00000398788 CABP1Q9NZU7 370 aa11.14□□□□□ -0.63
CDH23-203ENST00000398788 MARCH6O60337 910 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 CLGNO14967 610 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 MBD3O95983 291 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDH23-203ENST00000398788 RSPH14Q9UHP6 348 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 V9GYY5 206 aaPredicted RBP11.13□□□□□ -0.63
CDH23-203ENST00000398788 KDM4AO75164 1064 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 NOL10Q9BSC4 688 aaKnown RBP11.13□□□□□ -0.63
CDH23-203ENST00000398788 RPGRIP1LQ68CZ1 1315 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 CNPY4Q8N129 248 aa11.13□□□□□ -0.63
CDH23-203ENST00000398788 BECN2A8MW95 431 aa11.12□□□□□ -0.63
CDH23-203ENST00000398788 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
CDH23-203ENST00000398788 FAM193AP78312 1265 aa11.12□□□□□ -0.63
CDH23-203ENST00000398788 ABCC2Q92887 1545 aa11.12□□□□□ -0.63
CDH23-203ENST00000398788 ATP10BO94823 1461 aa11.12□□□□□ -0.63
CDH23-203ENST00000398788 RAB3GAP1Q15042 981 aa11.12□□□□□ -0.63
CDH23-203ENST00000398788 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
CDH23-203ENST00000398788 CFAP43Q8NDM7 1665 aa11.12□□□□□ -0.63
CDH23-203ENST00000398788 CEBPAP49715 358 aaPredicted RBP11.12□□□□□ -0.63
CDH23-203ENST00000398788 SURF6O75683 361 aaKnown RBP11.11□□□□□ -0.63
CDH23-203ENST00000398788 SULT6B1Q6IMI4 303 aa11.11□□□□□ -0.63
CDH23-203ENST00000398788 GABPB1Q06547 395 aaPredicted RBP11.11□□□□□ -0.63
CDH23-203ENST00000398788 CCAR2Q8N163 923 aaKnown RBP11.11□□□□□ -0.63
CDH23-203ENST00000398788 ADCY5O95622 1261 aa11.11□□□□□ -0.63
CDH23-203ENST00000398788 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
CDH23-203ENST00000398788 ADGRL1O94910 1474 aa11.11□□□□□ -0.63
CDH23-203ENST00000398788 CPLX1O14810 134 aa11.11□□□□□ -0.63
CDH23-203ENST00000398788 BANK1Q8NDB2 785 aa11.11□□□□□ -0.63
CDH23-203ENST00000398788 CDK19Q9BWU1 502 aa11.11□□□□□ -0.63
CDH23-203ENST00000398788 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
CDH23-203ENST00000398788 DUSP27Q5VZP5 1158 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 CCDC34Q96HJ3 373 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 RASSF4Q9H2L5 321 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 ANKRD30BQ9BXX2 1392 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 CCDC141Q6ZP82 1450 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 TPM4P67936 248 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 LRSAM1Q6UWE0 723 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 RUFY2Q8WXA3 655 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 MAGI3Q5TCQ9 1506 aa11.1□□□□□ -0.63
CDH23-203ENST00000398788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDH23-203ENST00000398788 UBTFL1P0CB47 393 aaPredicted RBP11.1□□□□□ -0.63
CDH23-203ENST00000398788 FBXO31Q5XUX0 539 aaPredicted RBP11.1□□□□□ -0.63
CDH23-203ENST00000398788 BICD2Q8TD16 824 aa11.09□□□□□ -0.63
CDH23-203ENST00000398788 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
CDH23-203ENST00000398788 GOLGA6L19H0YKK7 550 aa11.09□□□□□ -0.63
CDH23-203ENST00000398788 AKAP17AQ02040 695 aaKnown RBP11.09□□□□□ -0.63
CDH23-203ENST00000398788 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
CDH23-203ENST00000398788 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
CDH23-203ENST00000398788 USP19O94966 1318 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms