RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SF3B2Q13435 895 aaKnown RBP35.35■■■■□ 3.25
U2AF1-203ENST00000398137 USP31Q70CQ4 1352 aa35.35■■■■□ 3.25
U2AF1-203ENST00000398137 PARP4Q9UKK3 1724 aaKnown RBP35.35■■■■□ 3.25
U2AF1-203ENST00000398137 TMC1Q8TDI8 760 aa35.34■■■■□ 3.25
U2AF1-203ENST00000398137 SRCAPQ6ZRS2 3230 aa35.34■■■■□ 3.25
U2AF1-203ENST00000398137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.33■■■■□ 3.25
U2AF1-203ENST00000398137 SOX12O15370 315 aa35.32■■■■□ 3.24
U2AF1-203ENST00000398137 NME9Q86XW9 330 aa35.32■■■■□ 3.24
U2AF1-203ENST00000398137 KCNH5Q8NCM2 988 aa35.32■■■■□ 3.24
U2AF1-203ENST00000398137 POLR3GLQ9BT43 218 aa35.32■■■■□ 3.24
U2AF1-203ENST00000398137 THRAP3Q9Y2W1 955 aaKnown RBP35.32■■■■□ 3.24
U2AF1-203ENST00000398137 A0A1W2PP64 1363 aa35.32■■■■□ 3.24
U2AF1-203ENST00000398137 C11orf95C9JLR9 678 aaPredicted RBP35.3■■■■□ 3.24
U2AF1-203ENST00000398137 MYOM1P52179 1685 aa35.28■■■■□ 3.24
U2AF1-203ENST00000398137 EDC4Q6P2E9 1401 aaKnown RBP35.28■■■■□ 3.24
U2AF1-203ENST00000398137 WNK3Q9BYP7 1800 aa35.27■■■■□ 3.24
U2AF1-203ENST00000398137 NINLQ9Y2I6 1382 aa35.27■■■■□ 3.24
U2AF1-203ENST00000398137 DISP2A7MBM2 1401 aa35.26■■■■□ 3.24
U2AF1-203ENST00000398137 BAG6P46379 1132 aa35.26■■■■□ 3.24
U2AF1-203ENST00000398137 WDR17Q8IZU2 1322 aa35.26■■■■□ 3.23
U2AF1-203ENST00000398137 FAM196AQ6ZSG2 479 aa35.25■■■■□ 3.23
U2AF1-203ENST00000398137 HDGFL2Q7Z4V5 671 aaPredicted RBP35.25■■■■□ 3.23
U2AF1-203ENST00000398137 LRRC37A3O60309 1634 aa35.24■■■■□ 3.23
U2AF1-203ENST00000398137 EN1Q05925 392 aaPredicted RBP35.24■■■■□ 3.23
U2AF1-203ENST00000398137 ABCC6O95255 1503 aa35.23■■■■□ 3.23
U2AF1-203ENST00000398137 KIF7Q2M1P5 1343 aa35.23■■■■□ 3.23
U2AF1-203ENST00000398137 TRIM37O94972 964 aa35.22■■■■□ 3.23
U2AF1-203ENST00000398137 PDE3BQ13370 1112 aa35.22■■■■□ 3.23
U2AF1-203ENST00000398137 TOM1L2Q6ZVM7 507 aa35.22■■■■□ 3.23
U2AF1-203ENST00000398137 TERF2IPQ9NYB0 399 aa35.22■■■■□ 3.23
U2AF1-203ENST00000398137 PEAK1Q9H792 1746 aa35.22■■■■□ 3.23
U2AF1-203ENST00000398137 LTN1O94822 1766 aa35.22■■■■□ 3.23
U2AF1-203ENST00000398137 OVOS2A0A0J9YW53 1432 aa35.21■■■■□ 3.23
U2AF1-203ENST00000398137 OVOS2Q6IE36 1432 aa35.21■■■■□ 3.23
U2AF1-203ENST00000398137 CCDC7Q96M83 1385 aa35.17■■■■□ 3.22
U2AF1-203ENST00000398137 ANKRD36BQ8N2N9 1353 aa35.15■■■■□ 3.22
U2AF1-203ENST00000398137 WASHC2AQ641Q2 1341 aa35.14■■■■□ 3.22
U2AF1-203ENST00000398137 CARD10Q9BWT7 1032 aa35.14■■■■□ 3.22
U2AF1-203ENST00000398137 EZH2Q15910 746 aaKnown RBP35.13■■■■□ 3.21
U2AF1-203ENST00000398137 CAMKK2Q96RR4 588 aa35.13■■■■□ 3.21
U2AF1-203ENST00000398137 SBF2Q86WG5 1849 aa35.12■■■■□ 3.21
U2AF1-203ENST00000398137 ERBB3P21860 1342 aa35.08■■■■□ 3.21
U2AF1-203ENST00000398137 RREB1Q92766 1687 aa35.08■■■■□ 3.21
U2AF1-203ENST00000398137 APBA3O96018 575 aa35.08■■■■□ 3.21
U2AF1-203ENST00000398137 CSB-PGBD3P0DP91 1061 aa35.08■■■■□ 3.21
U2AF1-203ENST00000398137 DDB1Q16531 1140 aa35.08■■■■□ 3.21
U2AF1-203ENST00000398137 OVOS2A0A0G2JMS6 1433 aa35.07■■■■□ 3.21
U2AF1-203ENST00000398137 PSDA5PKW4 1024 aaPredicted RBP35.06■■■■□ 3.2
U2AF1-203ENST00000398137 MARCH10Q8NA82 808 aaPredicted RBP35.04■■■■□ 3.2
U2AF1-203ENST00000398137 CDCA7Q9BWT1 371 aaPredicted RBP35.03■■■■□ 3.2
U2AF1-203ENST00000398137 NUP188Q5SRE5 1749 aa35.03■■■■□ 3.2
U2AF1-203ENST00000398137 FBLN1P23142 703 aa35.01■■■■□ 3.2
U2AF1-203ENST00000398137 PTF1AQ7RTS3 328 aa35.01■■■■□ 3.2
U2AF1-203ENST00000398137 PARD3Q8TEW0 1356 aa35■■■■□ 3.19
U2AF1-203ENST00000398137 NSD3Q9BZ95 1437 aa35■■■■□ 3.19
U2AF1-203ENST00000398137 PANK3Q9H999 370 aa35■■■■□ 3.19
U2AF1-203ENST00000398137 BCL9O00512 1426 aa34.99■■■■□ 3.19
U2AF1-203ENST00000398137 ANKRD24Q8TF21 1146 aa34.99■■■■□ 3.19
U2AF1-203ENST00000398137 CARD14Q9BXL6 1004 aa34.99■■■■□ 3.19
U2AF1-203ENST00000398137 LRP5O75197 1615 aa34.97■■■■□ 3.19
U2AF1-203ENST00000398137 IP6K1Q92551 441 aa34.97■■■■□ 3.19
U2AF1-203ENST00000398137 FYB1O15117 783 aa34.96■■■■□ 3.19
U2AF1-203ENST00000398137 COG3Q96JB2 828 aa34.96■■■■□ 3.19
U2AF1-203ENST00000398137 TNS2Q63HR2 1409 aa34.96■■■■□ 3.19
U2AF1-203ENST00000398137 R3HDM1Q15032 1099 aaKnown RBP34.95■■■■□ 3.19
U2AF1-203ENST00000398137 NLRP2Q9NX02 1062 aa34.95■■■■□ 3.19
U2AF1-203ENST00000398137 MAP3K19Q56UN5 1328 aa34.95■■■■□ 3.19
U2AF1-203ENST00000398137 RGPD3A6NKT7 1758 aaPredicted RBP34.93■■■■□ 3.18
U2AF1-203ENST00000398137 RGPD4Q7Z3J3 1758 aa34.93■■■■□ 3.18
U2AF1-203ENST00000398137 KIF20BQ96Q89 1820 aa34.92■■■■□ 3.18
U2AF1-203ENST00000398137 EXOC5O00471 708 aa34.91■■■■□ 3.18
U2AF1-203ENST00000398137 GGNBP2Q9H3C7 697 aa34.91■■■■□ 3.18
U2AF1-203ENST00000398137 FAM208AQ9UK61 1670 aaKnown RBP34.9■■■■□ 3.18
U2AF1-203ENST00000398137 RGPD2P0DJD1 1756 aa34.9■■■■□ 3.18
U2AF1-203ENST00000398137 HOXC9P31274 260 aa34.89■■■■□ 3.18
U2AF1-203ENST00000398137 BCL11BQ9C0K0 894 aaPredicted RBP34.89■■■■□ 3.18
U2AF1-203ENST00000398137 IL2RBP14784 551 aa34.86■■■■□ 3.17
U2AF1-203ENST00000398137 PLSCR1O15162 318 aa34.85■■■■□ 3.17
U2AF1-203ENST00000398137 LTV1Q96GA3 475 aaPredicted RBP34.85■■■■□ 3.17
U2AF1-203ENST00000398137 CGNL1Q0VF96 1302 aa34.84■■■■□ 3.17
U2AF1-203ENST00000398137 ZNF316A6NFI3 1004 aaPredicted RBP34.84■■■■□ 3.17
U2AF1-203ENST00000398137 RRS1Q15050 365 aaKnown RBP34.84■■■■□ 3.17
U2AF1-203ENST00000398137 NHSQ6T4R5 1651 aa34.82■■■■□ 3.16
U2AF1-203ENST00000398137 AMPHP49418 695 aa34.81■■■■□ 3.16
U2AF1-203ENST00000398137 PROM2Q8N271 834 aa34.81■■■■□ 3.16
U2AF1-203ENST00000398137 RTL1A6NKG5 1358 aa34.8■■■■□ 3.16
U2AF1-203ENST00000398137 KCNQ2O43526 872 aa34.8■■■■□ 3.16
U2AF1-203ENST00000398137 KNSTRNQ9Y448 316 aa34.8■■■■□ 3.16
U2AF1-203ENST00000398137 SHANK3Q9BYB0 1731 aa34.76■■■■□ 3.16
U2AF1-203ENST00000398137 PER1O15534 1290 aaPredicted RBP34.75■■■■□ 3.15
U2AF1-203ENST00000398137 ANKRD26Q9UPS8 1709 aa34.73■■■■□ 3.15
U2AF1-203ENST00000398137 DDX10Q13206 875 aaKnown RBP34.73■■■■□ 3.15
U2AF1-203ENST00000398137 ACSBG1Q96GR2 724 aa34.73■■■■□ 3.15
U2AF1-203ENST00000398137 ANO8Q9HCE9 1232 aaPredicted RBP34.73■■■■□ 3.15
U2AF1-203ENST00000398137 MEGF6O75095 1541 aa34.72■■■■□ 3.15
U2AF1-203ENST00000398137 NBPF14Q5TI25 921 aa34.72■■■■□ 3.15
U2AF1-203ENST00000398137 NSD2O96028 1365 aa34.72■■■■□ 3.15
U2AF1-203ENST00000398137 AMER1Q5JTC6 1135 aaPredicted RBP34.71■■■■□ 3.15
U2AF1-203ENST00000398137 BTAF1O14981 1849 aa34.7■■■■□ 3.15
U2AF1-203ENST00000398137 NBPF6Q5VWK0 638 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms