RNA–Protein interactions for RNA: ENST00000397968.3

CDH7-202, Transcript of cadherin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH7, Length 12,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7-202ENST00000397968 AEBP2Q6ZN18 517 aaPredicted RBP11.75□□□□□ -0.53
CDH7-202ENST00000397968 WASF1Q92558 559 aa11.74□□□□□ -0.53
CDH7-202ENST00000397968 NACAP1Q9BZK3 213 aa11.74□□□□□ -0.53
CDH7-202ENST00000397968 MCM4P33991 863 aa11.74□□□□□ -0.53
CDH7-202ENST00000397968 NKTRP30414 1462 aaKnown RBP11.74□□□□□ -0.53
CDH7-202ENST00000397968 NEMFO60524 1076 aa11.74□□□□□ -0.53
CDH7-202ENST00000397968 DEF6Q9H4E7 631 aa11.74□□□□□ -0.53
CDH7-202ENST00000397968 UQCRHLA0A096LP55 91 aa11.74□□□□□ -0.53
CDH7-202ENST00000397968 UQCRHP07919 91 aa11.74□□□□□ -0.53
CDH7-202ENST00000397968 FIBPO43427 364 aa11.74□□□□□ -0.53
CDH7-202ENST00000397968 CTNNA3Q9UI47 895 aa11.73□□□□□ -0.53
CDH7-202ENST00000397968 MAP9Q49MG5 647 aa11.73□□□□□ -0.53
CDH7-202ENST00000397968 RBM33Q96EV2 1170 aaKnown RBP11.73□□□□□ -0.53
CDH7-202ENST00000397968 SPATA32Q96LK8 384 aa11.73□□□□□ -0.53
CDH7-202ENST00000397968 NUP62CLQ9H1M0 184 aa11.73□□□□□ -0.53
CDH7-202ENST00000397968 ERBINQ96RT1 1412 aa11.73□□□□□ -0.53
CDH7-202ENST00000397968 LARP1BQ659C4 914 aaKnown RBP11.73□□□□□ -0.53
CDH7-202ENST00000397968 PDCL3Q9H2J4 239 aa11.73□□□□□ -0.53
CDH7-202ENST00000397968 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
CDH7-202ENST00000397968 GPRASP1Q5JY77 1395 aa11.73□□□□□ -0.53
CDH7-202ENST00000397968 GNL3LQ9NVN8 582 aaKnown RBP11.72□□□□□ -0.53
CDH7-202ENST00000397968 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
CDH7-202ENST00000397968 ME1P48163 572 aa11.72□□□□□ -0.53
CDH7-202ENST00000397968 SCAND2PQ9GZW5 306 aaPredicted RBP11.72□□□□□ -0.53
CDH7-202ENST00000397968 CEP131Q9UPN4 1083 aa11.72□□□□□ -0.53
CDH7-202ENST00000397968 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
CDH7-202ENST00000397968 NOL7Q9UMY1 257 aaKnown RBP11.72□□□□□ -0.53
CDH7-202ENST00000397968 ATAD2Q6PL18 1390 aa11.72□□□□□ -0.53
CDH7-202ENST00000397968 PLEKHO1Q53GL0 409 aaPredicted RBP11.71□□□□□ -0.53
CDH7-202ENST00000397968 ZNF397Q8NF99 534 aaPredicted RBP11.71□□□□□ -0.53
CDH7-202ENST00000397968 NUTM2FA1L443 756 aa11.71□□□□□ -0.53
CDH7-202ENST00000397968 CTAGE5O15320 804 aa11.71□□□□□ -0.53
CDH7-202ENST00000397968 NOB1Q9ULX3 412 aaKnown RBP11.71□□□□□ -0.53
CDH7-202ENST00000397968 MAP3K11Q16584 847 aa11.71□□□□□ -0.54
CDH7-202ENST00000397968 CCDC27Q2M243 656 aa11.71□□□□□ -0.54
CDH7-202ENST00000397968 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.54
CDH7-202ENST00000397968 HMOX1P09601 288 aa11.71□□□□□ -0.54
CDH7-202ENST00000397968 ANKRD30BQ9BXX2 1392 aa11.71□□□□□ -0.54
CDH7-202ENST00000397968 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.54
CDH7-202ENST00000397968 ARAP1Q96P48 1450 aa11.71□□□□□ -0.54
CDH7-202ENST00000397968 TMCO3Q6UWJ1 677 aa11.71□□□□□ -0.54
CDH7-202ENST00000397968 UBXN4Q92575 508 aa11.71□□□□□ -0.54
CDH7-202ENST00000397968 RPGRIP1LQ68CZ1 1315 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 GOLGA6L9A6NEM1 432 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
CDH7-202ENST00000397968 KIF6Q6ZMV9 814 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 CCDC57Q2TAC2 916 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 KIF18AQ8NI77 898 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 CFTRP13569 1480 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 FCHSD2O94868 740 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 CUL7Q14999 1698 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 RAD21O60216 631 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 HMGB1P09429 215 aaKnown RBP11.7□□□□□ -0.54
CDH7-202ENST00000397968 EXOSC9Q06265 439 aaKnown RBP11.7□□□□□ -0.54
CDH7-202ENST00000397968 IMMTQ16891 758 aaKnown RBP11.7□□□□□ -0.54
CDH7-202ENST00000397968 CCDC148Q8NFR7 591 aa11.7□□□□□ -0.54
CDH7-202ENST00000397968 CGNQ9P2M7 1197 aaKnown RBP11.7□□□□□ -0.54
CDH7-202ENST00000397968 ZFYVE27Q5T4F4 411 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 RAB11FIP3O75154 756 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 BRPF3Q9ULD4 1205 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 ABCC11Q96J66 1382 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 SPC24Q8NBT2 197 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 POTEB2H3BUK9 544 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 DESP17661 470 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 WWC2Q6AWC2 1192 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 CALCOCO1Q9P1Z2 691 aa11.69□□□□□ -0.54
CDH7-202ENST00000397968 EZRP15311 586 aaKnown RBP11.69□□□□□ -0.54
CDH7-202ENST00000397968 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 NCAPD3P42695 1498 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 DDX11Q96FC9 970 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 SHTN1A0MZ66 631 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 SFPQP23246 707 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDH7-202ENST00000397968 BMP2KQ9NSY1 1161 aaPredicted RBP11.68□□□□□ -0.54
CDH7-202ENST00000397968 CCDC183Q5T5S1 534 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 CCDC69A6NI79 296 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 GSDMDP57764 484 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 CCDC83Q8IWF9 413 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 CRACR2AQ9BSW2 395 aa11.68□□□□□ -0.54
CDH7-202ENST00000397968 SH2B1Q9NRF2 756 aaPredicted RBP11.68□□□□□ -0.54
CDH7-202ENST00000397968 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
CDH7-202ENST00000397968 CDCA7LQ96GN5 454 aa11.67□□□□□ -0.54
CDH7-202ENST00000397968 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDH7-202ENST00000397968 ARHGAP29Q52LW3 1261 aa11.67□□□□□ -0.54
CDH7-202ENST00000397968 SLC52A1Q9NWF4 448 aa11.67□□□□□ -0.54
CDH7-202ENST00000397968 GGNBP2Q9H3C7 697 aa11.67□□□□□ -0.54
CDH7-202ENST00000397968 EPB41L2O43491 1005 aaKnown RBP11.67□□□□□ -0.54
CDH7-202ENST00000397968 GBP2P32456 591 aaPredicted RBP11.67□□□□□ -0.54
CDH7-202ENST00000397968 PTPN14Q15678 1187 aa11.67□□□□□ -0.54
CDH7-202ENST00000397968 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
CDH7-202ENST00000397968 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
CDH7-202ENST00000397968 TUBB4AP04350 444 aa11.66□□□□□ -0.54
CDH7-202ENST00000397968 PDRG1Q9NUG6 133 aa11.66□□□□□ -0.54
CDH7-202ENST00000397968 JAKMIP3Q5VZ66 844 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms