RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
SYNE4-203ENST00000397428 CARD10Q9BWT7 1032 aa17.11■□□□□ 0.33
SYNE4-203ENST00000397428 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
SYNE4-203ENST00000397428 OVOS2A0A0G2JMS6 1433 aa17.11■□□□□ 0.33
SYNE4-203ENST00000397428 OVOS2A0A0J9YW53 1432 aa17.11■□□□□ 0.33
SYNE4-203ENST00000397428 CPSF1Q10570 1443 aaKnown RBP17.11■□□□□ 0.33
SYNE4-203ENST00000397428 OVOS2Q6IE36 1432 aa17.11■□□□□ 0.33
SYNE4-203ENST00000397428 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
SYNE4-203ENST00000397428 PROM2Q8N271 834 aa17.1■□□□□ 0.33
SYNE4-203ENST00000397428 BCL9O00512 1426 aa17.1■□□□□ 0.33
SYNE4-203ENST00000397428 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
SYNE4-203ENST00000397428 KCNQ2O43526 872 aa17.09■□□□□ 0.33
SYNE4-203ENST00000397428 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
SYNE4-203ENST00000397428 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
SYNE4-203ENST00000397428 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
SYNE4-203ENST00000397428 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
SYNE4-203ENST00000397428 KTN1Q86UP2 1357 aaKnown RBP17.06■□□□□ 0.32
SYNE4-203ENST00000397428 EXOC5O00471 708 aa17.06■□□□□ 0.32
SYNE4-203ENST00000397428 RGPD5Q99666 1765 aa17.06■□□□□ 0.32
SYNE4-203ENST00000397428 RGPD3A6NKT7 1758 aaPredicted RBP17.05■□□□□ 0.32
SYNE4-203ENST00000397428 RGPD4Q7Z3J3 1758 aa17.05■□□□□ 0.32
SYNE4-203ENST00000397428 USP31Q70CQ4 1352 aa17.04■□□□□ 0.32
SYNE4-203ENST00000397428 SOX12O15370 315 aa17.04■□□□□ 0.32
SYNE4-203ENST00000397428 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
SYNE4-203ENST00000397428 SBNO2Q9Y2G9 1366 aa17.03■□□□□ 0.32
SYNE4-203ENST00000397428 NFAT5O94916 1531 aa17.03■□□□□ 0.32
SYNE4-203ENST00000397428 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.32
SYNE4-203ENST00000397428 WNK3Q9BYP7 1800 aa17.02■□□□□ 0.31
SYNE4-203ENST00000397428 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
SYNE4-203ENST00000397428 TXNRD1Q16881 649 aa17.01■□□□□ 0.31
SYNE4-203ENST00000397428 PDGFDQ9GZP0 370 aaPredicted RBP17.01■□□□□ 0.31
SYNE4-203ENST00000397428 PPP1R1BQ9UD71 204 aaPredicted RBP17.01■□□□□ 0.31
SYNE4-203ENST00000397428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
SYNE4-203ENST00000397428 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
SYNE4-203ENST00000397428 ABCC6O95255 1503 aa17■□□□□ 0.31
SYNE4-203ENST00000397428 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
SYNE4-203ENST00000397428 NME9Q86XW9 330 aa16.99■□□□□ 0.31
SYNE4-203ENST00000397428 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
SYNE4-203ENST00000397428 NINLQ9Y2I6 1382 aa16.99■□□□□ 0.31
SYNE4-203ENST00000397428 MON2Q7Z3U7 1717 aa16.99■□□□□ 0.31
SYNE4-203ENST00000397428 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
SYNE4-203ENST00000397428 CASZ1Q86V15 1759 aa16.97■□□□□ 0.31
SYNE4-203ENST00000397428 YY1P25490 414 aa16.97■□□□□ 0.31
SYNE4-203ENST00000397428 SLC15A2Q16348 729 aa16.97■□□□□ 0.31
SYNE4-203ENST00000397428 ERBB3P21860 1342 aa16.96■□□□□ 0.31
SYNE4-203ENST00000397428 PTGER2P43116 358 aa16.96■□□□□ 0.31
SYNE4-203ENST00000397428 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
SYNE4-203ENST00000397428 TMC1Q8TDI8 760 aa16.96■□□□□ 0.31
SYNE4-203ENST00000397428 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
SYNE4-203ENST00000397428 USP54Q70EL1 1684 aa16.96■□□□□ 0.31
SYNE4-203ENST00000397428 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
SYNE4-203ENST00000397428 IL2RBP14784 551 aa16.95■□□□□ 0.3
SYNE4-203ENST00000397428 STK32BQ9NY57 414 aa16.95■□□□□ 0.3
SYNE4-203ENST00000397428 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
SYNE4-203ENST00000397428 ZBTB7AO95365 584 aa16.94■□□□□ 0.3
SYNE4-203ENST00000397428 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
SYNE4-203ENST00000397428 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
SYNE4-203ENST00000397428 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
SYNE4-203ENST00000397428 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
SYNE4-203ENST00000397428 IP6K1Q92551 441 aa16.92■□□□□ 0.3
SYNE4-203ENST00000397428 ACSBG1Q96GR2 724 aa16.91■□□□□ 0.3
SYNE4-203ENST00000397428 SGIP1Q9BQI5 828 aa16.91■□□□□ 0.3
SYNE4-203ENST00000397428 LTN1O94822 1766 aa16.9■□□□□ 0.3
SYNE4-203ENST00000397428 TESK2Q96S53 571 aa16.9■□□□□ 0.3
SYNE4-203ENST00000397428 NHSQ6T4R5 1651 aa16.9■□□□□ 0.3
SYNE4-203ENST00000397428 MTFR1LQ9H019 292 aa16.89■□□□□ 0.29
SYNE4-203ENST00000397428 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
SYNE4-203ENST00000397428 SYT17Q9BSW7 474 aa16.88■□□□□ 0.29
SYNE4-203ENST00000397428 SLC24A1O60721 1099 aa16.87■□□□□ 0.29
SYNE4-203ENST00000397428 LRRC4BQ9NT99 713 aa16.87■□□□□ 0.29
SYNE4-203ENST00000397428 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
SYNE4-203ENST00000397428 FHDC1Q9C0D6 1143 aaPredicted RBP16.86■□□□□ 0.29
SYNE4-203ENST00000397428 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
SYNE4-203ENST00000397428 MYOM1P52179 1685 aa16.85■□□□□ 0.29
SYNE4-203ENST00000397428 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
SYNE4-203ENST00000397428 BTAF1O14981 1849 aa16.84■□□□□ 0.29
SYNE4-203ENST00000397428 FBLN1P23142 703 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 HOXC9P31274 260 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 PAPPAQ13219 1627 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 ZNF827Q17R98 1081 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 LTV1Q96GA3 475 aaPredicted RBP16.83■□□□□ 0.28
SYNE4-203ENST00000397428 COG3Q96JB2 828 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 ARXQ96QS3 562 aa16.83■□□□□ 0.28
SYNE4-203ENST00000397428 PRIM1P49642 420 aaKnown RBP16.81■□□□□ 0.28
SYNE4-203ENST00000397428 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
SYNE4-203ENST00000397428 FYB1O15117 783 aa16.8■□□□□ 0.28
SYNE4-203ENST00000397428 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
SYNE4-203ENST00000397428 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
SYNE4-203ENST00000397428 FAM208AQ9UK61 1670 aaKnown RBP16.79■□□□□ 0.28
SYNE4-203ENST00000397428 AMPHP49418 695 aa16.79■□□□□ 0.28
SYNE4-203ENST00000397428 ANKRD36BQ8N2N9 1353 aa16.78■□□□□ 0.28
SYNE4-203ENST00000397428 KAT6BQ8WYB5 2073 aa16.78■□□□□ 0.28
SYNE4-203ENST00000397428 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
SYNE4-203ENST00000397428 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
SYNE4-203ENST00000397428 KCNQ4P56696 695 aa16.76■□□□□ 0.27
SYNE4-203ENST00000397428 ZNF784Q8NCA9 323 aaPredicted RBP16.76■□□□□ 0.27
SYNE4-203ENST00000397428 NSD2O96028 1365 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms