RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 AEBP1Q8IUX7 1158 aa19.85■□□□□ 0.77
ATP2A3-206ENST00000397043 SULT6B1Q6IMI4 303 aa19.84■□□□□ 0.77
ATP2A3-206ENST00000397043 IL13P35225 146 aa19.84■□□□□ 0.77
ATP2A3-206ENST00000397043 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
ATP2A3-206ENST00000397043 IFT57Q9NWB7 429 aa19.83■□□□□ 0.77
ATP2A3-206ENST00000397043 PNPLA6Q8IY17 1366 aa19.83■□□□□ 0.77
ATP2A3-206ENST00000397043 CHMP4BQ9H444 224 aaKnown RBP19.83■□□□□ 0.76
ATP2A3-206ENST00000397043 LRRC7Q96NW7 1537 aa19.83■□□□□ 0.76
ATP2A3-206ENST00000397043 MCM10Q7L590 875 aa19.83■□□□□ 0.76
ATP2A3-206ENST00000397043 PANK2Q9BZ23 570 aa19.83■□□□□ 0.76
ATP2A3-206ENST00000397043 PPIP5K1Q6PFW1 1433 aa19.82■□□□□ 0.76
ATP2A3-206ENST00000397043 TBC1D9Q6ZT07 1266 aa19.82■□□□□ 0.76
ATP2A3-206ENST00000397043 GCC1Q96CN9 775 aa19.82■□□□□ 0.76
ATP2A3-206ENST00000397043 ZMYM3Q14202 1370 aa19.82■□□□□ 0.76
ATP2A3-206ENST00000397043 SIRT2Q8IXJ6 389 aa19.81■□□□□ 0.76
ATP2A3-206ENST00000397043 LMOD3Q0VAK6 560 aa19.81■□□□□ 0.76
ATP2A3-206ENST00000397043 BMP2KLQ5H9B9 411 aa19.81■□□□□ 0.76
ATP2A3-206ENST00000397043 MIS18AQ9NYP9 233 aa19.81■□□□□ 0.76
ATP2A3-206ENST00000397043 CCDC61Q9Y6R9 512 aa19.81■□□□□ 0.76
ATP2A3-206ENST00000397043 CFAP44Q96MT7 982 aa19.81■□□□□ 0.76
ATP2A3-206ENST00000397043 ALKQ9UM73 1620 aa19.8■□□□□ 0.76
ATP2A3-206ENST00000397043 C16orf71Q8IYS4 520 aaPredicted RBP19.8■□□□□ 0.76
ATP2A3-206ENST00000397043 API5Q9BZZ5 524 aaKnown RBP19.8■□□□□ 0.76
ATP2A3-206ENST00000397043 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
ATP2A3-206ENST00000397043 SLC4A10Q6U841 1118 aa19.79■□□□□ 0.76
ATP2A3-206ENST00000397043 ZNF428Q96B54 188 aa19.79■□□□□ 0.76
ATP2A3-206ENST00000397043 ARHGEF40Q8TER5 1519 aa19.79■□□□□ 0.76
ATP2A3-206ENST00000397043 RIMS2Q9UQ26 1411 aa19.79■□□□□ 0.76
ATP2A3-206ENST00000397043 CD2BP2O95400 341 aaKnown RBP19.79■□□□□ 0.76
ATP2A3-206ENST00000397043 XRCC6P12956 609 aaKnown RBP eCLIP19.78■□□□□ 0.761e-8■■□□□ 12.6
ATP2A3-206ENST00000397043 TNPO1Q92973 898 aaKnown RBP19.77■□□□□ 0.76
ATP2A3-206ENST00000397043 TMEM131LA2VDJ0 1609 aa19.77■□□□□ 0.76
ATP2A3-206ENST00000397043 SMARCA5O60264 1052 aaPredicted RBP19.77■□□□□ 0.75
ATP2A3-206ENST00000397043 METP08581 1390 aa19.77■□□□□ 0.75
ATP2A3-206ENST00000397043 RBM25P49756 843 aaKnown RBP19.76■□□□□ 0.75
ATP2A3-206ENST00000397043 DDX11L8A8MPP1 907 aa19.75■□□□□ 0.75
ATP2A3-206ENST00000397043 ARHGAP45Q92619 1136 aa19.75■□□□□ 0.75
ATP2A3-206ENST00000397043 FAM43AQ8N2R8 423 aa19.75■□□□□ 0.75
ATP2A3-206ENST00000397043 PREX1Q8TCU6 1659 aa19.74■□□□□ 0.75
ATP2A3-206ENST00000397043 HSP90AB2PQ58FF8 381 aa19.74■□□□□ 0.75
ATP2A3-206ENST00000397043 OTUD7AQ8TE49 926 aaPredicted RBP19.74■□□□□ 0.75
ATP2A3-206ENST00000397043 MED14O60244 1454 aa19.74■□□□□ 0.75
ATP2A3-206ENST00000397043 CDC45O75419 566 aa19.74■□□□□ 0.75
ATP2A3-206ENST00000397043 NECTIN2Q92692 538 aa19.74■□□□□ 0.75
ATP2A3-206ENST00000397043 GBP4Q96PP9 640 aa19.73■□□□□ 0.75
ATP2A3-206ENST00000397043 EIF4A2Q14240 407 aaKnown RBP19.73■□□□□ 0.75
ATP2A3-206ENST00000397043 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
ATP2A3-206ENST00000397043 ABCC4O15439 1325 aa19.72■□□□□ 0.75
ATP2A3-206ENST00000397043 K7ELQ4 463 aaPredicted RBP19.71■□□□□ 0.75
ATP2A3-206ENST00000397043 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
ATP2A3-206ENST00000397043 NCLP19338 710 aaKnown RBP19.71■□□□□ 0.75
ATP2A3-206ENST00000397043 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
ATP2A3-206ENST00000397043 GSPT1P15170 499 aaKnown RBP19.71■□□□□ 0.75
ATP2A3-206ENST00000397043 SLC26A8Q96RN1 970 aa19.71■□□□□ 0.75
ATP2A3-206ENST00000397043 RRAGDQ9NQL2 400 aaPredicted RBP19.71■□□□□ 0.75
ATP2A3-206ENST00000397043 MAP2P11137 1827 aaKnown RBP19.7■□□□□ 0.74
ATP2A3-206ENST00000397043 F6X3S4 739 aa19.7■□□□□ 0.74
ATP2A3-206ENST00000397043 FOXO3O43524 673 aa19.7■□□□□ 0.74
ATP2A3-206ENST00000397043 PLEKHM2Q8IWE5 1019 aa19.7■□□□□ 0.74
ATP2A3-206ENST00000397043 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 KIF2CQ99661 725 aa19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 MEIS3Q99687 375 aa19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 PLEKHG5O94827 1062 aa19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 SSFA2P28290 1259 aa19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 BRPF1P55201 1214 aaPredicted RBP19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 SNX21Q969T3 373 aa19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 A2ML1A8K2U0 1454 aa19.69■□□□□ 0.74
ATP2A3-206ENST00000397043 RICTORQ6R327 1708 aa19.68■□□□□ 0.74
ATP2A3-206ENST00000397043 ATP7BP35670 1465 aa19.68■□□□□ 0.74
ATP2A3-206ENST00000397043 TSPOAP1O95153 1857 aa19.68■□□□□ 0.74
ATP2A3-206ENST00000397043 PRR36Q9H6K5 1346 aa19.68■□□□□ 0.74
ATP2A3-206ENST00000397043 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
ATP2A3-206ENST00000397043 ACEP12821 1306 aa19.67■□□□□ 0.74
ATP2A3-206ENST00000397043 NUTM2GQ5VZR2 741 aa19.67■□□□□ 0.74
ATP2A3-206ENST00000397043 TSPYL4Q9UJ04 414 aa19.67■□□□□ 0.74
ATP2A3-206ENST00000397043 GRPEL1Q9HAV7 217 aa19.66■□□□□ 0.74
ATP2A3-206ENST00000397043 PTCH1Q13635 1447 aa19.66■□□□□ 0.74
ATP2A3-206ENST00000397043 GOLGA6L22H0YM25 854 aa19.66■□□□□ 0.74
ATP2A3-206ENST00000397043 FOXD4L5Q5VV16 416 aaPredicted RBP19.66■□□□□ 0.74
ATP2A3-206ENST00000397043 TSHZ3Q63HK5 1081 aa19.66■□□□□ 0.74
ATP2A3-206ENST00000397043 FOXD4L4Q8WXT5 416 aaPredicted RBP19.66■□□□□ 0.74
ATP2A3-206ENST00000397043 DCTPP1Q9H773 170 aa19.65■□□□□ 0.74
ATP2A3-206ENST00000397043 MRE11P49959 708 aa19.65■□□□□ 0.74
ATP2A3-206ENST00000397043 CASC1Q6TDU7 716 aa19.65■□□□□ 0.74
ATP2A3-206ENST00000397043 LTV1Q96GA3 475 aaPredicted RBP19.65■□□□□ 0.74
ATP2A3-206ENST00000397043 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
ATP2A3-206ENST00000397043 KIF20BQ96Q89 1820 aa19.64■□□□□ 0.73
ATP2A3-206ENST00000397043 TTC22Q5TAA0 569 aa19.64■□□□□ 0.73
ATP2A3-206ENST00000397043 C14orf37Q86TY3 774 aa19.64■□□□□ 0.73
ATP2A3-206ENST00000397043 CPS1P31327 1500 aa19.64■□□□□ 0.73
ATP2A3-206ENST00000397043 AMPHP49418 695 aa19.64■□□□□ 0.73
ATP2A3-206ENST00000397043 NGDNQ8NEJ9 315 aaKnown RBP19.64■□□□□ 0.73
ATP2A3-206ENST00000397043 RAB3GAP1Q15042 981 aa19.63■□□□□ 0.73
ATP2A3-206ENST00000397043 TRIM44Q96DX7 344 aaPredicted RBP19.63■□□□□ 0.73
ATP2A3-206ENST00000397043 DDX49Q9Y6V7 483 aaKnown RBP19.63■□□□□ 0.73
ATP2A3-206ENST00000397043 CPSF1Q10570 1443 aaKnown RBP19.63■□□□□ 0.73
ATP2A3-206ENST00000397043 HAP1P54257 671 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms