RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TOM1L2Q6ZVM7 507 aa25.81■■□□□ 1.72
FXN-203ENST00000396366 PUS7Q96PZ0 661 aaKnown RBP25.81■■□□□ 1.72
FXN-203ENST00000396366 NFAT5O94916 1531 aa25.81■■□□□ 1.72
FXN-203ENST00000396366 A0A1W2PP64 1363 aa25.81■■□□□ 1.72
FXN-203ENST00000396366 USP31Q70CQ4 1352 aa25.8■■□□□ 1.72
FXN-203ENST00000396366 TERF2IPQ9NYB0 399 aa25.79■■□□□ 1.72
FXN-203ENST00000396366 TNS1Q9HBL0 1735 aaKnown RBP25.78■■□□□ 1.72
FXN-203ENST00000396366 WDR17Q8IZU2 1322 aa25.77■■□□□ 1.72
FXN-203ENST00000396366 EDC4Q6P2E9 1401 aaKnown RBP25.76■■□□□ 1.71
FXN-203ENST00000396366 PARP4Q9UKK3 1724 aaKnown RBP25.76■■□□□ 1.71
FXN-203ENST00000396366 USP47Q96K76 1375 aa25.75■■□□□ 1.71
FXN-203ENST00000396366 CSB-PGBD3P0DP91 1061 aa25.74■■□□□ 1.71
FXN-203ENST00000396366 EZH2Q15910 746 aaKnown RBP25.74■■□□□ 1.71
FXN-203ENST00000396366 USP54Q70EL1 1684 aa25.74■■□□□ 1.71
FXN-203ENST00000396366 APBA3O96018 575 aa25.72■■□□□ 1.71
FXN-203ENST00000396366 PSDA5PKW4 1024 aaPredicted RBP25.71■■□□□ 1.71
FXN-203ENST00000396366 DDB1Q16531 1140 aa25.7■■□□□ 1.7
FXN-203ENST00000396366 CAMKK2Q96RR4 588 aa25.7■■□□□ 1.7
FXN-203ENST00000396366 CARD10Q9BWT7 1032 aa25.7■■□□□ 1.7
FXN-203ENST00000396366 LRRC37A3O60309 1634 aa25.7■■□□□ 1.7
FXN-203ENST00000396366 LTN1O94822 1766 aa25.69■■□□□ 1.7
FXN-203ENST00000396366 SLC24A1O60721 1099 aa25.69■■□□□ 1.7
FXN-203ENST00000396366 TMF1P82094 1093 aa25.69■■□□□ 1.7
FXN-203ENST00000396366 DISP2A7MBM2 1401 aa25.69■■□□□ 1.7
FXN-203ENST00000396366 WNK3Q9BYP7 1800 aa25.68■■□□□ 1.7
FXN-203ENST00000396366 TIMELESSQ9UNS1 1208 aa25.68■■□□□ 1.7
FXN-203ENST00000396366 OVOS2A0A0J9YW53 1432 aa25.68■■□□□ 1.7
FXN-203ENST00000396366 OVOS2Q6IE36 1432 aa25.68■■□□□ 1.7
FXN-203ENST00000396366 NINLQ9Y2I6 1382 aa25.68■■□□□ 1.7
FXN-203ENST00000396366 CLSPNQ9HAW4 1339 aa25.66■■□□□ 1.7
FXN-203ENST00000396366 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
FXN-203ENST00000396366 FBLN1P23142 703 aa25.65■■□□□ 1.7
FXN-203ENST00000396366 MARCH10Q8NA82 808 aaPredicted RBP25.65■■□□□ 1.7
FXN-203ENST00000396366 ABCC6O95255 1503 aa25.64■■□□□ 1.7
FXN-203ENST00000396366 PTF1AQ7RTS3 328 aa25.63■■□□□ 1.69
FXN-203ENST00000396366 CDCA7Q9BWT1 371 aaPredicted RBP25.63■■□□□ 1.69
FXN-203ENST00000396366 NLRP2Q9NX02 1062 aa25.63■■□□□ 1.69
FXN-203ENST00000396366 OVOS2A0A0G2JMS6 1433 aa25.63■■□□□ 1.69
FXN-203ENST00000396366 ERBB3P21860 1342 aa25.63■■□□□ 1.69
FXN-203ENST00000396366 ANKRD36BQ8N2N9 1353 aa25.62■■□□□ 1.69
FXN-203ENST00000396366 R3HDM1Q15032 1099 aaKnown RBP25.62■■□□□ 1.69
FXN-203ENST00000396366 ANKRD24Q8TF21 1146 aa25.62■■□□□ 1.69
FXN-203ENST00000396366 COG3Q96JB2 828 aa25.61■■□□□ 1.69
FXN-203ENST00000396366 SBF2Q86WG5 1849 aa25.6■■□□□ 1.69
FXN-203ENST00000396366 CCDC7Q96M83 1385 aa25.6■■□□□ 1.69
FXN-203ENST00000396366 EXOC5O00471 708 aa25.59■■□□□ 1.69
FXN-203ENST00000396366 FYB1O15117 783 aa25.58■■□□□ 1.69
FXN-203ENST00000396366 CCER1Q8TC90 406 aaPredicted RBP25.58■■□□□ 1.69
FXN-203ENST00000396366 IP6K1Q92551 441 aa25.58■■□□□ 1.69
FXN-203ENST00000396366 LTV1Q96GA3 475 aaPredicted RBP25.58■■□□□ 1.69
FXN-203ENST00000396366 GGNBP2Q9H3C7 697 aa25.58■■□□□ 1.69
FXN-203ENST00000396366 C11orf95C9JLR9 678 aaPredicted RBP25.56■■□□□ 1.68
FXN-203ENST00000396366 MAP3K19Q56UN5 1328 aa25.56■■□□□ 1.68
FXN-203ENST00000396366 PARD3Q8TEW0 1356 aa25.56■■□□□ 1.68
FXN-203ENST00000396366 RREB1Q92766 1687 aa25.55■■□□□ 1.68
FXN-203ENST00000396366 CDCA8Q53HL2 280 aa25.55■■□□□ 1.68
FXN-203ENST00000396366 NUP188Q5SRE5 1749 aa25.54■■□□□ 1.68
FXN-203ENST00000396366 CARD14Q9BXL6 1004 aa25.53■■□□□ 1.68
FXN-203ENST00000396366 BCL11BQ9C0K0 894 aaPredicted RBP25.53■■□□□ 1.68
FXN-203ENST00000396366 IL2RBP14784 551 aa25.52■■□□□ 1.68
FXN-203ENST00000396366 HOXC9P31274 260 aa25.52■■□□□ 1.68
FXN-203ENST00000396366 RRS1Q15050 365 aaKnown RBP25.52■■□□□ 1.68
FXN-203ENST00000396366 MYOM1P52179 1685 aa25.52■■□□□ 1.68
FXN-203ENST00000396366 AMPHP49418 695 aa25.51■■□□□ 1.67
FXN-203ENST00000396366 BCL9O00512 1426 aa25.5■■□□□ 1.67
FXN-203ENST00000396366 TNS2Q63HR2 1409 aa25.5■■□□□ 1.67
FXN-203ENST00000396366 KCNQ2O43526 872 aa25.49■■□□□ 1.67
FXN-203ENST00000396366 PLSCR1O15162 318 aa25.48■■□□□ 1.67
FXN-203ENST00000396366 LRP5O75197 1615 aa25.48■■□□□ 1.67
FXN-203ENST00000396366 KIF20BQ96Q89 1820 aa25.47■■□□□ 1.67
FXN-203ENST00000396366 RGPD2P0DJD1 1756 aa25.47■■□□□ 1.67
FXN-203ENST00000396366 PROM2Q8N271 834 aa25.47■■□□□ 1.67
FXN-203ENST00000396366 NBPF14Q5TI25 921 aa25.46■■□□□ 1.67
FXN-203ENST00000396366 ACSBG1Q96GR2 724 aa25.46■■□□□ 1.67
FXN-203ENST00000396366 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
FXN-203ENST00000396366 NSD3Q9BZ95 1437 aa25.45■■□□□ 1.66
FXN-203ENST00000396366 HSPA5P11021 654 aaKnown RBP25.44■■□□□ 1.66
FXN-203ENST00000396366 FAM208AQ9UK61 1670 aaKnown RBP25.42■■□□□ 1.66
FXN-203ENST00000396366 RGPD3A6NKT7 1758 aaPredicted RBP25.42■■□□□ 1.66
FXN-203ENST00000396366 RGPD4Q7Z3J3 1758 aa25.42■■□□□ 1.66
FXN-203ENST00000396366 EIF4G2P78344 907 aaKnown RBP eCLIP25.41■■□□□ 1.66
FXN-203ENST00000396366 NBPF6Q5VWK0 638 aa25.41■■□□□ 1.66
FXN-203ENST00000396366 DDX54Q8TDD1 881 aaKnown RBP25.41■■□□□ 1.66
FXN-203ENST00000396366 NBPF4Q96M43 638 aa25.41■■□□□ 1.66
FXN-203ENST00000396366 HSP90AB2PQ58FF8 381 aa25.4■■□□□ 1.66
FXN-203ENST00000396366 USHBP1Q8N6Y0 703 aa25.39■■□□□ 1.66
FXN-203ENST00000396366 ANO8Q9HCE9 1232 aaPredicted RBP25.39■■□□□ 1.66
FXN-203ENST00000396366 RTL1A6NKG5 1358 aa25.39■■□□□ 1.65
FXN-203ENST00000396366 KAT6BQ8WYB5 2073 aa25.38■■□□□ 1.65
FXN-203ENST00000396366 TXNRD1Q16881 649 aa25.38■■□□□ 1.65
FXN-203ENST00000396366 NHSQ6T4R5 1651 aa25.38■■□□□ 1.65
FXN-203ENST00000396366 EMILIN1Q9Y6C2 1016 aa25.37■■□□□ 1.65
FXN-203ENST00000396366 MEGF6O75095 1541 aa25.35■■□□□ 1.65
FXN-203ENST00000396366 INSRP06213 1382 aa25.33■■□□□ 1.65
FXN-203ENST00000396366 PDGFDQ9GZP0 370 aaPredicted RBP25.33■■□□□ 1.65
FXN-203ENST00000396366 BTAF1O14981 1849 aa25.33■■□□□ 1.64
FXN-203ENST00000396366 FLT4P35916 1363 aa25.32■■□□□ 1.64
FXN-203ENST00000396366 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
FXN-203ENST00000396366 ZCRB1Q8TBF4 217 aaKnown RBP25.32■■□□□ 1.64
FXN-203ENST00000396366 SHANK3Q9BYB0 1731 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms