RNA–Protein interactions for RNA: ENST00000396344.4

HOXA10-202, Transcript of homeobox A10, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HOXA10, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-202ENST00000396344 BTG4Q9NY30 223 aa22.38■■□□□ 1.17
HOXA10-202ENST00000396344 CPSF1Q10570 1443 aaKnown RBP22.38■■□□□ 1.17
HOXA10-202ENST00000396344 NRAPQ86VF7 1730 aa22.38■■□□□ 1.17
HOXA10-202ENST00000396344 KIAA0232Q92628 1395 aa22.38■■□□□ 1.17
HOXA10-202ENST00000396344 NUTM2GQ5VZR2 741 aa22.38■■□□□ 1.17
HOXA10-202ENST00000396344 MORC1Q86VD1 984 aa22.38■■□□□ 1.17
HOXA10-202ENST00000396344 SLC12A5Q9H2X9 1139 aa22.38■■□□□ 1.17
HOXA10-202ENST00000396344 AKAP12Q02952 1782 aa22.36■■□□□ 1.17
HOXA10-202ENST00000396344 TTC21AQ8NDW8 1320 aa22.36■■□□□ 1.17
HOXA10-202ENST00000396344 NRKQ7Z2Y5 1582 aa22.35■■□□□ 1.17
HOXA10-202ENST00000396344 HDGFL2Q7Z4V5 671 aaPredicted RBP22.34■■□□□ 1.17
HOXA10-202ENST00000396344 GCP02774 474 aa22.33■■□□□ 1.17
HOXA10-202ENST00000396344 CFAP53Q96M91 514 aa22.33■■□□□ 1.17
HOXA10-202ENST00000396344 CCDC9Q9Y3X0 531 aaKnown RBP22.33■■□□□ 1.17
HOXA10-202ENST00000396344 TTC21BQ7Z4L5 1316 aa22.33■■□□□ 1.17
HOXA10-202ENST00000396344 NLRP6P59044 892 aa22.33■■□□□ 1.16
HOXA10-202ENST00000396344 ZC3H6P61129 1189 aaKnown RBP22.33■■□□□ 1.16
HOXA10-202ENST00000396344 RNF123Q5XPI4 1314 aa22.33■■□□□ 1.16
HOXA10-202ENST00000396344 A0A1W2PP64 1363 aa22.32■■□□□ 1.16
HOXA10-202ENST00000396344 SLIT3O75094 1523 aa22.31■■□□□ 1.16
HOXA10-202ENST00000396344 SPATA31A5Q5VU36 1347 aa22.31■■□□□ 1.16
HOXA10-202ENST00000396344 SPATA31A7Q8IWB4 1347 aa22.31■■□□□ 1.16
HOXA10-202ENST00000396344 SEPT12Q8IYM1 358 aa22.3■■□□□ 1.16
HOXA10-202ENST00000396344 ADAMTS8Q9UP79 889 aa22.3■■□□□ 1.16
HOXA10-202ENST00000396344 PIK3C2AO00443 1686 aa22.29■■□□□ 1.16
HOXA10-202ENST00000396344 CHRNA2Q15822 529 aa22.29■■□□□ 1.16
HOXA10-202ENST00000396344 PPP4R2Q9NY27 417 aa22.29■■□□□ 1.16
HOXA10-202ENST00000396344 MON2Q7Z3U7 1717 aa22.29■■□□□ 1.16
HOXA10-202ENST00000396344 CD163L1Q9NR16 1453 aa22.28■■□□□ 1.16
HOXA10-202ENST00000396344 CCDC125Q86Z20 511 aa22.28■■□□□ 1.16
HOXA10-202ENST00000396344 KCNH5Q8NCM2 988 aa22.27■■□□□ 1.16
HOXA10-202ENST00000396344 LMO7Q8WWI1 1683 aa22.26■■□□□ 1.15
HOXA10-202ENST00000396344 AATKQ6ZMQ8 1374 aa22.26■■□□□ 1.15
HOXA10-202ENST00000396344 USP31Q70CQ4 1352 aa22.26■■□□□ 1.15
HOXA10-202ENST00000396344 SPATA31A1Q5TZJ5 1347 aa22.26■■□□□ 1.15
HOXA10-202ENST00000396344 CAMTA1Q9Y6Y1 1673 aa22.25■■□□□ 1.15
HOXA10-202ENST00000396344 EDC4Q6P2E9 1401 aaKnown RBP22.24■■□□□ 1.15
HOXA10-202ENST00000396344 BRWD3Q6RI45 1802 aa22.24■■□□□ 1.15
HOXA10-202ENST00000396344 EVA1CP58658 441 aa22.23■■□□□ 1.15
HOXA10-202ENST00000396344 FAM98CQ17RN3 349 aaKnown RBP22.23■■□□□ 1.15
HOXA10-202ENST00000396344 KRT27Q7Z3Y8 459 aa22.22■■□□□ 1.15
HOXA10-202ENST00000396344 STRN4Q9NRL3 753 aa22.22■■□□□ 1.15
HOXA10-202ENST00000396344 USP54Q70EL1 1684 aa22.22■■□□□ 1.15
HOXA10-202ENST00000396344 RCAN3Q9UKA8 241 aa22.21■■□□□ 1.15
HOXA10-202ENST00000396344 ARHGEF25Q86VW2 580 aa22.21■■□□□ 1.15
HOXA10-202ENST00000396344 THSD7AQ9UPZ6 1657 aa22.2■■□□□ 1.14
HOXA10-202ENST00000396344 BARGINQ6ZT62 677 aa22.2■■□□□ 1.14
HOXA10-202ENST00000396344 COL5A2P05997 1499 aaPredicted RBP22.19■■□□□ 1.14
HOXA10-202ENST00000396344 NCBP3Q53F19 620 aaKnown RBP22.19■■□□□ 1.14
HOXA10-202ENST00000396344 THRAP3Q9Y2W1 955 aaKnown RBP22.19■■□□□ 1.14
HOXA10-202ENST00000396344 ABCC6O95255 1503 aa22.19■■□□□ 1.14
HOXA10-202ENST00000396344 A0A0G2JS52 829 aa22.18■■□□□ 1.14
HOXA10-202ENST00000396344 MYT1Q01538 1121 aa22.18■■□□□ 1.14
HOXA10-202ENST00000396344 GOLGA2Q08379 1002 aa22.18■■□□□ 1.14
HOXA10-202ENST00000396344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.18■■□□□ 1.14
HOXA10-202ENST00000396344 EP400Q96L91 3159 aa22.18■■□□□ 1.14
HOXA10-202ENST00000396344 LARP1Q6PKG0 1096 aaKnown RBP22.17■■□□□ 1.14
HOXA10-202ENST00000396344 SALL2Q9Y467 1007 aaPredicted RBP22.17■■□□□ 1.14
HOXA10-202ENST00000396344 NFAT5O94916 1531 aa22.17■■□□□ 1.14
HOXA10-202ENST00000396344 COL18A1P39060 1754 aa22.17■■□□□ 1.14
HOXA10-202ENST00000396344 ZNF521Q96K83 1311 aa22.17■■□□□ 1.14
HOXA10-202ENST00000396344 IRX6P78412 446 aaPredicted RBP22.16■■□□□ 1.14
HOXA10-202ENST00000396344 TCP11L2Q8N4U5 519 aa22.16■■□□□ 1.14
HOXA10-202ENST00000396344 RRP1P56182 461 aaKnown RBP22.16■■□□□ 1.14
HOXA10-202ENST00000396344 CRB1P82279 1406 aa22.15■■□□□ 1.14
HOXA10-202ENST00000396344 MTHFSP49914 203 aa22.15■■□□□ 1.14
HOXA10-202ENST00000396344 NME9Q86XW9 330 aa22.15■■□□□ 1.14
HOXA10-202ENST00000396344 RUNDC1Q96C34 613 aa22.14■■□□□ 1.13
HOXA10-202ENST00000396344 ZBTB7CA1YPR0 619 aa22.12■■□□□ 1.13
HOXA10-202ENST00000396344 OVOS2A0A0J9YW53 1432 aa22.12■■□□□ 1.13
HOXA10-202ENST00000396344 OVOS2Q6IE36 1432 aa22.12■■□□□ 1.13
HOXA10-202ENST00000396344 TNNT2P45379 298 aaPredicted RBP22.12■■□□□ 1.13
HOXA10-202ENST00000396344 PNNQ9H307 717 aaKnown RBP22.12■■□□□ 1.13
HOXA10-202ENST00000396344 ZRANB1Q9UGI0 708 aa22.12■■□□□ 1.13
HOXA10-202ENST00000396344 WDR17Q8IZU2 1322 aa22.12■■□□□ 1.13
HOXA10-202ENST00000396344 E9PSI1 815 aa22.11■■□□□ 1.13
HOXA10-202ENST00000396344 FYB1O15117 783 aa22.11■■□□□ 1.13
HOXA10-202ENST00000396344 USP35Q9P2H5 1018 aa22.11■■□□□ 1.13
HOXA10-202ENST00000396344 AXIN2Q9Y2T1 843 aa22.11■■□□□ 1.13
HOXA10-202ENST00000396344 COL3A1P02461 1466 aaPredicted RBP22.11■■□□□ 1.13
HOXA10-202ENST00000396344 SF3B2Q13435 895 aaKnown RBP22.1■■□□□ 1.13
HOXA10-202ENST00000396344 APAF1O14727 1248 aa22.09■■□□□ 1.13
HOXA10-202ENST00000396344 SOX12O15370 315 aa22.08■■□□□ 1.13
HOXA10-202ENST00000396344 CCDC146Q8IYE0 955 aa22.08■■□□□ 1.13
HOXA10-202ENST00000396344 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.08■■□□□ 1.13
HOXA10-202ENST00000396344 CDCA7LQ96GN5 454 aa22.08■■□□□ 1.13
HOXA10-202ENST00000396344 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
HOXA10-202ENST00000396344 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.12
HOXA10-202ENST00000396344 TOM1L2Q6ZVM7 507 aa22.08■■□□□ 1.12
HOXA10-202ENST00000396344 SLFN5Q08AF3 891 aa22.07■■□□□ 1.12
HOXA10-202ENST00000396344 COG3Q96JB2 828 aa22.07■■□□□ 1.12
HOXA10-202ENST00000396344 CDCA7Q9BWT1 371 aaPredicted RBP22.07■■□□□ 1.12
HOXA10-202ENST00000396344 CCDC27Q2M243 656 aa22.06■■□□□ 1.12
HOXA10-202ENST00000396344 FAM196AQ6ZSG2 479 aa22.06■■□□□ 1.12
HOXA10-202ENST00000396344 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
HOXA10-202ENST00000396344 PARP4Q9UKK3 1724 aaKnown RBP22.05■■□□□ 1.12
HOXA10-202ENST00000396344 DUSP27Q5VZP5 1158 aa22.05■■□□□ 1.12
HOXA10-202ENST00000396344 MAP2P11137 1827 aaKnown RBP22.05■■□□□ 1.12
HOXA10-202ENST00000396344 RGPD5Q99666 1765 aa22.04■■□□□ 1.12
HOXA10-202ENST00000396344 CSB-PGBD3P0DP91 1061 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms