RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 OVOS2A0A0J9YW53 1432 aa23.07■■□□□ 1.28
DDR1-229ENST00000396342 OVOS2Q6IE36 1432 aa23.07■■□□□ 1.28
DDR1-229ENST00000396342 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
DDR1-229ENST00000396342 SLIT3O75094 1523 aa23.05■■□□□ 1.28
DDR1-229ENST00000396342 EXOC5O00471 708 aa23.05■■□□□ 1.28
DDR1-229ENST00000396342 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
DDR1-229ENST00000396342 PUS7Q96PZ0 661 aaKnown RBP23.03■■□□□ 1.28
DDR1-229ENST00000396342 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
DDR1-229ENST00000396342 TRIM26Q12899 539 aaPredicted RBP23.02■■□□□ 1.28
DDR1-229ENST00000396342 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
DDR1-229ENST00000396342 CCDC7Q96M83 1385 aa23.01■■□□□ 1.27
DDR1-229ENST00000396342 BCL11BQ9C0K0 894 aaPredicted RBP23■■□□□ 1.27
DDR1-229ENST00000396342 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
DDR1-229ENST00000396342 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
DDR1-229ENST00000396342 PPP1R1BQ9UD71 204 aaPredicted RBP22.99■■□□□ 1.27
DDR1-229ENST00000396342 SLC12A5Q9H2X9 1139 aa22.98■■□□□ 1.27
DDR1-229ENST00000396342 NME9Q86XW9 330 aa22.97■■□□□ 1.27
DDR1-229ENST00000396342 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
DDR1-229ENST00000396342 PLSCR1O15162 318 aa22.96■■□□□ 1.27
DDR1-229ENST00000396342 USP31Q70CQ4 1352 aa22.96■■□□□ 1.27
DDR1-229ENST00000396342 PIK3C2AO00443 1686 aa22.96■■□□□ 1.27
DDR1-229ENST00000396342 EDC4Q6P2E9 1401 aaKnown RBP22.95■■□□□ 1.26
DDR1-229ENST00000396342 LRP5O75197 1615 aa22.94■■□□□ 1.26
DDR1-229ENST00000396342 COG3Q96JB2 828 aa22.94■■□□□ 1.26
DDR1-229ENST00000396342 SPON1Q9HCB6 807 aa22.94■■□□□ 1.26
DDR1-229ENST00000396342 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
DDR1-229ENST00000396342 MARCH10Q8NA82 808 aaPredicted RBP22.93■■□□□ 1.26
DDR1-229ENST00000396342 SRCAPQ6ZRS2 3230 aa22.93■■□□□ 1.26
DDR1-229ENST00000396342 TNS1Q9HBL0 1735 aaKnown RBP22.92■■□□□ 1.26
DDR1-229ENST00000396342 ST20-MTHFSA0A0A6YYL1 179 aa22.92■■□□□ 1.26
DDR1-229ENST00000396342 IL2RBP14784 551 aa22.92■■□□□ 1.26
DDR1-229ENST00000396342 ANKRD24Q8TF21 1146 aa22.92■■□□□ 1.26
DDR1-229ENST00000396342 PARP4Q9UKK3 1724 aaKnown RBP22.91■■□□□ 1.26
DDR1-229ENST00000396342 TMF1P82094 1093 aa22.91■■□□□ 1.26
DDR1-229ENST00000396342 ABCC6O95255 1503 aa22.91■■□□□ 1.26
DDR1-229ENST00000396342 ERBB3P21860 1342 aa22.89■■□□□ 1.26
DDR1-229ENST00000396342 STK32BQ9NY57 414 aa22.89■■□□□ 1.25
DDR1-229ENST00000396342 AMPHP49418 695 aa22.88■■□□□ 1.25
DDR1-229ENST00000396342 A0A1W2PP64 1363 aa22.88■■□□□ 1.25
DDR1-229ENST00000396342 KCNQ2O43526 872 aa22.87■■□□□ 1.25
DDR1-229ENST00000396342 BCL9O00512 1426 aa22.87■■□□□ 1.25
DDR1-229ENST00000396342 AKAP12Q02952 1782 aa22.86■■□□□ 1.25
DDR1-229ENST00000396342 NFAT5O94916 1531 aa22.86■■□□□ 1.25
DDR1-229ENST00000396342 IP6K1Q92551 441 aa22.85■■□□□ 1.25
DDR1-229ENST00000396342 LTV1Q96GA3 475 aaPredicted RBP22.85■■□□□ 1.25
DDR1-229ENST00000396342 TNS2Q63HR2 1409 aa22.83■■□□□ 1.25
DDR1-229ENST00000396342 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
DDR1-229ENST00000396342 TXNRD1Q16881 649 aa22.82■■□□□ 1.24
DDR1-229ENST00000396342 TESK2Q96S53 571 aa22.82■■□□□ 1.24
DDR1-229ENST00000396342 COL18A1P39060 1754 aa22.81■■□□□ 1.24
DDR1-229ENST00000396342 CD163L1Q9NR16 1453 aa22.81■■□□□ 1.24
DDR1-229ENST00000396342 ACSBG1Q96GR2 724 aa22.81■■□□□ 1.24
DDR1-229ENST00000396342 MON2Q7Z3U7 1717 aa22.8■■□□□ 1.24
DDR1-229ENST00000396342 TIMELESSQ9UNS1 1208 aa22.8■■□□□ 1.24
DDR1-229ENST00000396342 USP47Q96K76 1375 aa22.79■■□□□ 1.24
DDR1-229ENST00000396342 DDX54Q8TDD1 881 aaKnown RBP22.79■■□□□ 1.24
DDR1-229ENST00000396342 ANKRD36BQ8N2N9 1353 aa22.78■■□□□ 1.24
DDR1-229ENST00000396342 SMG6Q86US8 1419 aaKnown RBP22.77■■□□□ 1.24
DDR1-229ENST00000396342 SLC15A2Q16348 729 aa22.76■■□□□ 1.23
DDR1-229ENST00000396342 PTF1AQ7RTS3 328 aa22.76■■□□□ 1.23
DDR1-229ENST00000396342 RREB1Q92766 1687 aa22.75■■□□□ 1.23
DDR1-229ENST00000396342 SYTL4Q96C24 671 aaPredicted RBP22.75■■□□□ 1.23
DDR1-229ENST00000396342 MAP3K19Q56UN5 1328 aa22.75■■□□□ 1.23
DDR1-229ENST00000396342 PEAK1Q9H792 1746 aa22.74■■□□□ 1.23
DDR1-229ENST00000396342 HOXC9P31274 260 aa22.74■■□□□ 1.23
DDR1-229ENST00000396342 ANO8Q9HCE9 1232 aaPredicted RBP22.74■■□□□ 1.23
DDR1-229ENST00000396342 HMGB2P26583 209 aaKnown RBP22.73■■□□□ 1.23
DDR1-229ENST00000396342 RAPGEF4Q8WZA2 1011 aa22.73■■□□□ 1.23
DDR1-229ENST00000396342 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
DDR1-229ENST00000396342 NUP188Q5SRE5 1749 aa22.73■■□□□ 1.23
DDR1-229ENST00000396342 ZBTB7AO95365 584 aa22.72■■□□□ 1.23
DDR1-229ENST00000396342 PROM2Q8N271 834 aa22.72■■□□□ 1.23
DDR1-229ENST00000396342 GGNBP2Q9H3C7 697 aa22.72■■□□□ 1.23
DDR1-229ENST00000396342 ZCRB1Q8TBF4 217 aaKnown RBP22.71■■□□□ 1.23
DDR1-229ENST00000396342 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
DDR1-229ENST00000396342 SLC27A3Q5K4L6 730 aa22.7■■□□□ 1.22
DDR1-229ENST00000396342 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
DDR1-229ENST00000396342 RGPD3A6NKT7 1758 aaPredicted RBP22.7■■□□□ 1.22
DDR1-229ENST00000396342 RGPD4Q7Z3J3 1758 aa22.7■■□□□ 1.22
DDR1-229ENST00000396342 USP54Q70EL1 1684 aa22.69■■□□□ 1.22
DDR1-229ENST00000396342 CGNL1Q0VF96 1302 aa22.69■■□□□ 1.22
DDR1-229ENST00000396342 FYB1O15117 783 aa22.69■■□□□ 1.22
DDR1-229ENST00000396342 MTFR1LQ9H019 292 aa22.69■■□□□ 1.22
DDR1-229ENST00000396342 ATF5Q9Y2D1 282 aaPredicted RBP22.69■■□□□ 1.22
DDR1-229ENST00000396342 TATP17735 454 aaPredicted RBP22.68■■□□□ 1.22
DDR1-229ENST00000396342 RRS1Q15050 365 aaKnown RBP22.68■■□□□ 1.22
DDR1-229ENST00000396342 RGPD5Q99666 1765 aa22.68■■□□□ 1.22
DDR1-229ENST00000396342 WNK3Q9BYP7 1800 aa22.67■■□□□ 1.22
DDR1-229ENST00000396342 YY1P25490 414 aa22.67■■□□□ 1.22
DDR1-229ENST00000396342 POLR3GLQ9BT43 218 aa22.66■■□□□ 1.22
DDR1-229ENST00000396342 LTN1O94822 1766 aa22.64■■□□□ 1.22
DDR1-229ENST00000396342 PRIM1P49642 420 aaKnown RBP22.64■■□□□ 1.21
DDR1-229ENST00000396342 PPM1GO15355 546 aaPredicted RBP22.63■■□□□ 1.21
DDR1-229ENST00000396342 FBLN1P23142 703 aa22.63■■□□□ 1.21
DDR1-229ENST00000396342 SBF2Q86WG5 1849 aa22.62■■□□□ 1.21
DDR1-229ENST00000396342 POLD1P28340 1107 aa22.62■■□□□ 1.21
DDR1-229ENST00000396342 TFCP2L1Q9NZI6 479 aa22.62■■□□□ 1.21
DDR1-229ENST00000396342 FLT4P35916 1363 aa22.62■■□□□ 1.21
DDR1-229ENST00000396342 KIF24Q5T7B8 1368 aa22.62■■□□□ 1.21
DDR1-229ENST00000396342 SLC16A10Q8TF71 515 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms