RNA–Protein interactions for RNA: ENST00000396251.1

XIRP1-202, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene XIRP1, Length 6,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-202ENST00000396251 RAI14Q9P0K7 980 aa14.58□□□□□ -0.08
XIRP1-202ENST00000396251 TWISTNBQ3B726 338 aaPredicted RBP14.58□□□□□ -0.08
XIRP1-202ENST00000396251 C19orf44Q9H6X5 657 aa14.58□□□□□ -0.08
XIRP1-202ENST00000396251 ZNF287Q9HBT7 754 aa14.58□□□□□ -0.08
XIRP1-202ENST00000396251 PAF1Q8N7H5 531 aa14.58□□□□□ -0.08
XIRP1-202ENST00000396251 CRACR2BQ8N4Y2 399 aaPredicted RBP14.57□□□□□ -0.08
XIRP1-202ENST00000396251 MYO1BO43795 1136 aa14.57□□□□□ -0.08
XIRP1-202ENST00000396251 SLKQ9H2G2 1235 aaPredicted RBP14.57□□□□□ -0.08
XIRP1-202ENST00000396251 CDK13Q14004 1512 aaKnown RBP14.57□□□□□ -0.08
XIRP1-202ENST00000396251 NCKAP5LQ9HCH0 1330 aa14.57□□□□□ -0.08
XIRP1-202ENST00000396251 COG6Q9Y2V7 657 aa14.57□□□□□ -0.08
XIRP1-202ENST00000396251 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
XIRP1-202ENST00000396251 NF2P35240 595 aa14.56□□□□□ -0.08
XIRP1-202ENST00000396251 SUPT6HQ7KZ85 1726 aaKnown RBP14.56□□□□□ -0.08
XIRP1-202ENST00000396251 BAG6P46379 1132 aa14.56□□□□□ -0.08
XIRP1-202ENST00000396251 CCT4P50991 539 aaKnown RBP14.56□□□□□ -0.08
XIRP1-202ENST00000396251 RRP12Q5JTH9 1297 aaKnown RBP14.56□□□□□ -0.08
XIRP1-202ENST00000396251 IFNL2Q8IZJ0 200 aa14.56□□□□□ -0.08
XIRP1-202ENST00000396251 PCMTD1Q96MG8 357 aaPredicted RBP14.56□□□□□ -0.08
XIRP1-202ENST00000396251 C6orf229H3BNL8 230 aa14.55□□□□□ -0.08
XIRP1-202ENST00000396251 KIF7Q2M1P5 1343 aa14.55□□□□□ -0.08
XIRP1-202ENST00000396251 A0A0U1RQG5 324 aaPredicted RBP14.55□□□□□ -0.08
XIRP1-202ENST00000396251 TMEM87AQ8NBN3 555 aa14.55□□□□□ -0.08
XIRP1-202ENST00000396251 IFIT1P09914 478 aaKnown RBP14.55□□□□□ -0.08
XIRP1-202ENST00000396251 GNAI2P04899 355 aa14.55□□□□□ -0.08
XIRP1-202ENST00000396251 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
XIRP1-202ENST00000396251 TFCP2L1Q9NZI6 479 aa14.55□□□□□ -0.08
XIRP1-202ENST00000396251 DDX46Q7L014 1031 aaKnown RBP14.54□□□□□ -0.08
XIRP1-202ENST00000396251 BEGAINQ9BUH8 593 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 LRP2BPQ9P2M1 347 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 PSMA5P28066 241 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 TCP11L2Q8N4U5 519 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 PARP3Q9Y6F1 533 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 GRM1Q13255 1194 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 WDR78Q5VTH9 848 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 ATF7IPQ6VMQ6 1270 aa14.54□□□□□ -0.08
XIRP1-202ENST00000396251 CDK5RAP3Q96JB5 506 aa14.53□□□□□ -0.08
XIRP1-202ENST00000396251 FMNL2Q96PY5 1086 aa14.53□□□□□ -0.08
XIRP1-202ENST00000396251 PPP1R42Q7Z4L9 355 aa14.53□□□□□ -0.08
XIRP1-202ENST00000396251 AAMPQ13685 434 aa14.53□□□□□ -0.08
XIRP1-202ENST00000396251 NBPF1Q3BBV0 1214 aa14.53□□□□□ -0.08
XIRP1-202ENST00000396251 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
XIRP1-202ENST00000396251 INTS3Q68E01 1043 aaKnown RBP14.53□□□□□ -0.08
XIRP1-202ENST00000396251 TRMT112Q9UI30 125 aaKnown RBP14.53□□□□□ -0.08
XIRP1-202ENST00000396251 CENPQQ7L2Z9 268 aaPredicted RBP14.52□□□□□ -0.08
XIRP1-202ENST00000396251 HDAC9Q9UKV0 1011 aa14.52□□□□□ -0.08
XIRP1-202ENST00000396251 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.08
XIRP1-202ENST00000396251 LMOD1P29536 600 aaPredicted RBP14.52□□□□□ -0.09
XIRP1-202ENST00000396251 CHRNA2Q15822 529 aa14.51□□□□□ -0.09
XIRP1-202ENST00000396251 ODF2Q5BJF6 829 aa14.51□□□□□ -0.09
XIRP1-202ENST00000396251 ARID3AQ99856 593 aa14.51□□□□□ -0.09
XIRP1-202ENST00000396251 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
XIRP1-202ENST00000396251 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.51□□□□□ -0.09
XIRP1-202ENST00000396251 METTL24Q5JXM2 366 aa14.51□□□□□ -0.09
XIRP1-202ENST00000396251 AKAP2Q9Y2D5 859 aa14.51□□□□□ -0.09
XIRP1-202ENST00000396251 IPO7O95373 1038 aaKnown RBP14.51□□□□□ -0.09
XIRP1-202ENST00000396251 CDCA7Q9BWT1 371 aaPredicted RBP14.51□□□□□ -0.09
XIRP1-202ENST00000396251 FCHSD2O94868 740 aa14.5□□□□□ -0.09
XIRP1-202ENST00000396251 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
XIRP1-202ENST00000396251 CT47A1Q5JQC4 288 aaPredicted RBP14.5□□□□□ -0.09
XIRP1-202ENST00000396251 LARP1Q6PKG0 1096 aaKnown RBP14.5□□□□□ -0.09
XIRP1-202ENST00000396251 CDC5LQ99459 802 aaKnown RBP14.5□□□□□ -0.09
XIRP1-202ENST00000396251 ZNF518AQ6AHZ1 1483 aa14.5□□□□□ -0.09
XIRP1-202ENST00000396251 JDP2Q8WYK2 163 aa14.5□□□□□ -0.09
XIRP1-202ENST00000396251 NBPF6Q5VWK0 638 aa14.5□□□□□ -0.09
XIRP1-202ENST00000396251 NBPF5PQ86XG9 351 aaPredicted RBP14.5□□□□□ -0.09
XIRP1-202ENST00000396251 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
XIRP1-202ENST00000396251 NBPF4Q96M43 638 aa14.5□□□□□ -0.09
XIRP1-202ENST00000396251 FOXD4L1Q9NU39 408 aa14.5□□□□□ -0.09
XIRP1-202ENST00000396251 CAMSAP2Q08AD1 1489 aa14.49□□□□□ -0.09
XIRP1-202ENST00000396251 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
XIRP1-202ENST00000396251 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
XIRP1-202ENST00000396251 BRD4O60885 1362 aaPredicted RBP14.49□□□□□ -0.09
XIRP1-202ENST00000396251 KRT18P05783 430 aaKnown RBP14.49□□□□□ -0.09
XIRP1-202ENST00000396251 USP5P45974 858 aa14.49□□□□□ -0.09
XIRP1-202ENST00000396251 PPP2R1AP30153 589 aa14.49□□□□□ -0.09
XIRP1-202ENST00000396251 EPS15P42566 896 aa14.49□□□□□ -0.09
XIRP1-202ENST00000396251 ZCRB1Q8TBF4 217 aaKnown RBP14.49□□□□□ -0.09
XIRP1-202ENST00000396251 C11orf95C9JLR9 678 aaPredicted RBP14.48□□□□□ -0.09
XIRP1-202ENST00000396251 SIL1Q9H173 461 aa14.48□□□□□ -0.09
XIRP1-202ENST00000396251 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
XIRP1-202ENST00000396251 TDO2P48775 406 aa14.48□□□□□ -0.09
XIRP1-202ENST00000396251 TRIM21P19474 475 aaKnown RBP14.48□□□□□ -0.09
XIRP1-202ENST00000396251 MPHOSPH6Q99547 160 aaKnown RBP14.48□□□□□ -0.09
XIRP1-202ENST00000396251 ABCF2Q9UG63 623 aa14.48□□□□□ -0.09
XIRP1-202ENST00000396251 TXLNAP40222 546 aa14.48□□□□□ -0.09
XIRP1-202ENST00000396251 TNIP1Q15025 636 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 BECN2A8MW95 431 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 NAIPQ13075 1403 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 ATP6V1AP38606 617 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 USHBP1Q8N6Y0 703 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 ACSBG1Q96GR2 724 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 SETDB2Q96T68 719 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 GOLGA6L19H0YKK7 550 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 ZNF76P36508 570 aa14.47□□□□□ -0.09
XIRP1-202ENST00000396251 FKBP4Q02790 459 aaKnown RBP eCLIP14.47□□□□□ -0.09
XIRP1-202ENST00000396251 RRP1P56182 461 aaKnown RBP14.46□□□□□ -0.09
XIRP1-202ENST00000396251 TAF7Q15545 349 aaPredicted RBP14.46□□□□□ -0.09
XIRP1-202ENST00000396251 FAM161AQ3B820 660 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms