RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
TRAK1-203ENST00000396175 XPCQ01831 940 aaPredicted RBP17.22■□□□□ 0.35
TRAK1-203ENST00000396175 FILIP1Q7Z7B0 1213 aa17.22■□□□□ 0.35
TRAK1-203ENST00000396175 TSPYL1Q9H0U9 437 aa17.22■□□□□ 0.35
TRAK1-203ENST00000396175 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
TRAK1-203ENST00000396175 CALRP27797 417 aaKnown RBP17.22■□□□□ 0.35
TRAK1-203ENST00000396175 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
TRAK1-203ENST00000396175 SART3Q15020 963 aaKnown RBP17.22■□□□□ 0.35
TRAK1-203ENST00000396175 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
TRAK1-203ENST00000396175 DACH1Q9UI36 760 aa17.22■□□□□ 0.35
TRAK1-203ENST00000396175 UBXN4Q92575 508 aa17.21■□□□□ 0.35
TRAK1-203ENST00000396175 PPFIBP1Q86W92 1011 aa17.21■□□□□ 0.35
TRAK1-203ENST00000396175 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
TRAK1-203ENST00000396175 CLCN1P35523 988 aa17.21■□□□□ 0.35
TRAK1-203ENST00000396175 CCDC183Q5T5S1 534 aa17.2■□□□□ 0.34
TRAK1-203ENST00000396175 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
TRAK1-203ENST00000396175 SSFA2P28290 1259 aa17.2■□□□□ 0.34
TRAK1-203ENST00000396175 MYO6Q9UM54 1294 aa17.2■□□□□ 0.34
TRAK1-203ENST00000396175 DAPK1P53355 1430 aa17.19■□□□□ 0.34
TRAK1-203ENST00000396175 FCHSD2O94868 740 aa17.19■□□□□ 0.34
TRAK1-203ENST00000396175 UPF3BQ9BZI7 483 aaKnown RBP17.19■□□□□ 0.34
TRAK1-203ENST00000396175 STK3Q13188 491 aa17.19■□□□□ 0.34
TRAK1-203ENST00000396175 TMPOP42166 694 aaKnown RBP17.19■□□□□ 0.34
TRAK1-203ENST00000396175 VPS37DQ86XT2 251 aa17.19■□□□□ 0.34
TRAK1-203ENST00000396175 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
TRAK1-203ENST00000396175 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
TRAK1-203ENST00000396175 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
TRAK1-203ENST00000396175 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
TRAK1-203ENST00000396175 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
TRAK1-203ENST00000396175 CBX1P83916 185 aa17.18■□□□□ 0.34
TRAK1-203ENST00000396175 JAKMIP1Q96N16 626 aaKnown RBP17.18■□□□□ 0.34
TRAK1-203ENST00000396175 ZNHIT6Q9NWK9 470 aaKnown RBP17.18■□□□□ 0.34
TRAK1-203ENST00000396175 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
TRAK1-203ENST00000396175 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
TRAK1-203ENST00000396175 PTPN14Q15678 1187 aa17.18■□□□□ 0.34
TRAK1-203ENST00000396175 DUSP27Q5VZP5 1158 aa17.18■□□□□ 0.34
TRAK1-203ENST00000396175 MAGEC2Q9UBF1 373 aaPredicted RBP17.18■□□□□ 0.34
TRAK1-203ENST00000396175 KIAA0754O94854 1291 aa17.18■□□□□ 0.34
TRAK1-203ENST00000396175 TMCO3Q6UWJ1 677 aa17.17■□□□□ 0.34
TRAK1-203ENST00000396175 USP8P40818 1118 aa17.17■□□□□ 0.34
TRAK1-203ENST00000396175 PSME1Q06323 249 aa17.17■□□□□ 0.34
TRAK1-203ENST00000396175 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
TRAK1-203ENST00000396175 DYNC1I1O14576 645 aa17.17■□□□□ 0.34
TRAK1-203ENST00000396175 TXLNAP40222 546 aa17.17■□□□□ 0.34
TRAK1-203ENST00000396175 KRT32Q14532 448 aa17.17■□□□□ 0.34
TRAK1-203ENST00000396175 PLEKHH1Q9ULM0 1364 aa17.17■□□□□ 0.34
TRAK1-203ENST00000396175 SMTNL1A8MU46 457 aa17.16■□□□□ 0.34
TRAK1-203ENST00000396175 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
TRAK1-203ENST00000396175 KLHL40Q2TBA0 621 aa17.16■□□□□ 0.34
TRAK1-203ENST00000396175 ALDH1L2Q3SY69 923 aa17.16■□□□□ 0.34
TRAK1-203ENST00000396175 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
TRAK1-203ENST00000396175 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
TRAK1-203ENST00000396175 NLRP6P59044 892 aa17.16■□□□□ 0.34
TRAK1-203ENST00000396175 FAM177A1Q8N128 213 aaPredicted RBP17.16■□□□□ 0.34
TRAK1-203ENST00000396175 KIF18AQ8NI77 898 aa17.16■□□□□ 0.34
TRAK1-203ENST00000396175 ERICH4A6NGS2 130 aa17.15■□□□□ 0.34
TRAK1-203ENST00000396175 EPS15P42566 896 aa17.15■□□□□ 0.34
TRAK1-203ENST00000396175 DHX29Q7Z478 1369 aaKnown RBP17.15■□□□□ 0.34
TRAK1-203ENST00000396175 PRDM10Q9NQV6 1147 aa17.15■□□□□ 0.34
TRAK1-203ENST00000396175 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
TRAK1-203ENST00000396175 SCAND2PQ9GZW5 306 aaPredicted RBP17.14■□□□□ 0.34
TRAK1-203ENST00000396175 CGNQ9P2M7 1197 aaKnown RBP17.14■□□□□ 0.34
TRAK1-203ENST00000396175 ABCC11Q96J66 1382 aa17.14■□□□□ 0.33
TRAK1-203ENST00000396175 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.33
TRAK1-203ENST00000396175 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
TRAK1-203ENST00000396175 CT47A1Q5JQC4 288 aaPredicted RBP17.14■□□□□ 0.33
TRAK1-203ENST00000396175 PRAM1Q96QH2 718 aa17.14■□□□□ 0.33
TRAK1-203ENST00000396175 ARHGAP5Q13017 1502 aa17.14■□□□□ 0.33
TRAK1-203ENST00000396175 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRAK1-203ENST00000396175 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
TRAK1-203ENST00000396175 AFAP1Q8N556 730 aa17.13■□□□□ 0.33
TRAK1-203ENST00000396175 BAG4O95429 457 aaKnown RBP17.13■□□□□ 0.33
TRAK1-203ENST00000396175 USP25Q9UHP3 1055 aa17.13■□□□□ 0.33
TRAK1-203ENST00000396175 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
TRAK1-203ENST00000396175 GOLGA6L10A6NI86 522 aa17.13■□□□□ 0.33
TRAK1-203ENST00000396175 SRGAP3O43295 1099 aa17.13■□□□□ 0.33
TRAK1-203ENST00000396175 MAP4K4O95819 1239 aaPredicted RBP17.13■□□□□ 0.33
TRAK1-203ENST00000396175 ZMYND15Q9H091 742 aa17.13■□□□□ 0.33
TRAK1-203ENST00000396175 BMP2KLQ5H9B9 411 aa17.12■□□□□ 0.33
TRAK1-203ENST00000396175 PRIMPOLQ96LW4 560 aa17.12■□□□□ 0.33
TRAK1-203ENST00000396175 CALCOCO1Q9P1Z2 691 aa17.12■□□□□ 0.33
TRAK1-203ENST00000396175 GPRASP1Q5JY77 1395 aa17.12■□□□□ 0.33
TRAK1-203ENST00000396175 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAK1-203ENST00000396175 DEF6Q9H4E7 631 aa17.12■□□□□ 0.33
TRAK1-203ENST00000396175 LUC7LQ9NQ29 371 aaKnown RBP17.12■□□□□ 0.33
TRAK1-203ENST00000396175 GBP3Q9H0R5 595 aa17.12■□□□□ 0.33
TRAK1-203ENST00000396175 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
TRAK1-203ENST00000396175 TRIM22Q8IYM9 498 aa17.12■□□□□ 0.33
TRAK1-203ENST00000396175 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
TRAK1-203ENST00000396175 IL1RAPL2Q9NP60 686 aa17.11■□□□□ 0.33
TRAK1-203ENST00000396175 SKIDA1Q1XH10 827 aa17.11■□□□□ 0.33
TRAK1-203ENST00000396175 TCEAL9Q9UHQ7 104 aa17.11■□□□□ 0.33
TRAK1-203ENST00000396175 KDM4AO75164 1064 aa17.11■□□□□ 0.33
TRAK1-203ENST00000396175 MX1P20591 662 aa17.11■□□□□ 0.33
TRAK1-203ENST00000396175 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
TRAK1-203ENST00000396175 TXLNBQ8N3L3 684 aa17.11■□□□□ 0.33
TRAK1-203ENST00000396175 SH2B1Q9NRF2 756 aaPredicted RBP17.11■□□□□ 0.33
TRAK1-203ENST00000396175 SUPT6HQ7KZ85 1726 aaKnown RBP17.11■□□□□ 0.33
TRAK1-203ENST00000396175 NEMFO60524 1076 aa17.11■□□□□ 0.33
TRAK1-203ENST00000396175 CABP1Q9NZU7 370 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms